KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:25:40 2014 Check: 00 .. Name: ENSP00000435150/1-694 Len: 779 Check: 4205 Weight: 1.00 Name: ENSBTAP00000005116/1-693 Len: 779 Check: 5411 Weight: 1.00 Name: ENSTTRP00000000891/1-648 Len: 779 Check: 7480 Weight: 1.00 Name: bmy_05169T0/1-778 Len: 779 Check: 5226 Weight: 1.00 Name: BACU014286/1-192 Len: 779 Check: 4283 Weight: 1.00 // 1 50 ENSP00000435150/1-694 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000005116/1-693 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000891/1-648 ---------- ---------- ---------- ---------- ---------- bmy_05169T0/1-778 MVGLILHSHF VQRSKIHRAE TFLFKTTGCP PIARLTSGRT SIGFLPRAKR BACU014286/1-192 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000435150/1-694 ---------- ---------- ---------- -----MDLHK QWENTETNWH ENSBTAP00000005116/1-693 ---------- ---------- ---------- -----MDLHK QWENTEANWH ENSTTRP00000000891/1-648 ---------- ---------- ---------- ---------- ---------- bmy_05169T0/1-778 QVRLLQIKQL QASKKQLREG RDGQKHPFTN THTVAMDLHK QWENTETNWR BACU014286/1-192 ---------- ---------- ---------- -----MDLHK QWENTETNWR 101 150 ENSP00000435150/1-694 KEKMELLDQF DNERKEWESQ WKIMQKKIEE LCREVKLWRK ININESAKII ENSBTAP00000005116/1-693 KEKMELLDQF DNERKEWESQ WKIMQKKIEE LCHEVKRRRK INVSERAKVI ENSTTRP00000000891/1-648 ---------- ---------- ---------- LCHEVKLRRK INMSERA-II bmy_05169T0/1-778 KEKMELLDQF DNERKEWESQ WKIMQKKIEE LCHEVKLRRK INMSERA-II BACU014286/1-192 KEKMELLDQF DNERKEWESQ WKIMQKKIEE LCHEVKLRRK INMSERA-II 151 200 ENSP00000435150/1-694 DLYHEKTIPE KVIESSPNYP DLGQSEFIRT NHKDGLRKEN KREQSLVSGG ENSBTAP00000005116/1-693 DLDCEKAVGD K-MESSPDYP NSGQCKFTGI HPRDILGKKD KTEQSLLRER ENSTTRP00000000891/1-648 DLDREKAIQD KMMESSPNYP SSRQCEFTGM NHRDGLGKKG KTEQSLLSER bmy_05169T0/1-778 DLDREKAIQD KMMASSPNYP NLRQCEFTGM NHRDGLGKKG KTEQSLLSER BACU014286/1-192 DLDREKAIQD EMMESSPNCP NSRQCEFTGM NHRDGLGKKG KTEQSLLSER 201 250 ENSP00000435150/1-694 NQMCKEQKAT KKSKVGFLDP LATDNQKECE AWPDLRTSEE DSKSCSGALS ENSBTAP00000005116/1-693 NQVCKEQKTI KKSKVGYMDS EARDNQKEHG AWPDLRTSEA ENKSCSGALN ENSTTRP00000000891/1-648 NQMCKEQKTI KKSKVGLMDS LATDNQKECE TPPDLRTSEE ENKRCSGALN bmy_05169T0/1-778 NQMRKEQKTI KKSKVGLMDS MATDNQKECE TPPDLRTSEE ENKSCSGALN BACU014286/1-192 NQMRKEQKTI KKSKVGLMDS MATDNQKECE TPPDLRTSDE ENKSCSGTLN 251 300 ENSP00000435150/1-694 TALEELAKVS EELCSFQEEI RKRSNHRRMK SDSFLQEMPN VTNIPHGDPM ENSBTAP00000005116/1-693 TALEELAKVS EELCNFQEEI RKRSNHRRMK SDSFLQETPN VMNTPHGGHM ENSTTRP00000000891/1-648 TALEELAKVS EELCSFQEEI RKRSNHRRMK SDSFLQETPV VTNMPYGDHT bmy_05169T0/1-778 TALEELAKVS EELCSFQEEI RKRSNHRRMK SDSFLQETPV VINMPYGDHM BACU014286/1-192 TALEELAKVS EELCSFQEEI RKRSNHRR-- ---------- ---------- 301 350 ENSP00000435150/1-694 INNDQCILPI SLEKEKQKNR KNLSCTNVLQ SNSTKKCGID TIDLKRNETP ENSBTAP00000005116/1-693 INNSQCIPST SLENEKWKNR KNLSCTNVFQ NNSKKKDGID TTDPKRSETP ENSTTRP00000000891/1-648 INNDQCITPT SLEKEKKKNI KNLSCTDVFQ NNSKKKGGVD KTDLQRNETP bmy_05169T0/1-778 INNNQCITST NLEKEKKKNR KNLSCTDVFQ NNSKKKGGID KSDLQRSETP BACU014286/1-192 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000435150/1-694 PVPPPRSTSR NFPSSDSEQA YERWKERLDH NSWVPHEGRS KRNYNPHFPL ENSBTAP00000005116/1-693 PIPPPRSTSR NFPSSYSAQA HESWKECLDH SSWVAQEGQG EKNSHPHFFW ENSTTRP00000000891/1-648 PVPPPRSTSR NFPSSCSAQA HESLKESSDH NGWVAQEGQG KKNCNPHFLW bmy_05169T0/1-778 PVPPPRSTSR NFPSSCSAQA HESLKESSDH NGWVAQEGQG EKNCNPHFLW BACU014286/1-192 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000435150/1-694 RQQEMSMLYP NEGKTSKDGI IFSSLVPEVK IDSKPPSNED VGLSMWSCDI ENSBTAP00000005116/1-693 KHDEMPLLGL NEGKTLNDGI TFPSLAPEAK VDNKPPCNEN TGLSMWSCNT ENSTTRP00000000891/1-648 RHNEMPTLCL NERKTLKDGI TVSSLAPETK IDKKPSCNEN VGLTVWSCDT bmy_05169T0/1-778 RHDEMPMLCL NEGKTLKDGI TFSSLAPETK IDKKPSCNEN VGLTMWSCDT BACU014286/1-192 ---------- ---------- ---------- ---------- ---------- 451 500 ENSP00000435150/1-694 GIGAKRSPST SWFQKTCSTP SNPKYEMVIP DHPAKSHPDL HVSNDCSSSV ENSBTAP00000005116/1-693 GVCAKNSPST LWFQKACSTP NKPKYEKVIP DHSTKPPPDL HISNDCSSLA ENSTTRP00000000891/1-648 GIGAKNSPST PWFQKTCSIP NKPKYEKVIP DHPAKSHPDL HISNVCSSLV bmy_05169T0/1-778 GIVAKNSPST PWFQKTCSIP NKPKYEKVIP DHPAKSHPDL HISNVCSSLL BACU014286/1-192 ---------- ---------- ---------- ---------- ---------- 501 550 ENSP00000435150/1-694 AESSSPLRNF SCGFERTTRN EKLAAKTDEF NRTVFRTDRN CQAIQQNHSC ENSBTAP00000005116/1-693 SQSSSPLRSF SYGFEKTTGN EKLAKKTDEF NRIVFRTDRN CHAVQQSQSC ENSTTRP00000000891/1-648 TQSSSPLRSF SCGFERTTRN EKLAAKTDEF NRIVFRTNRN CHAVQQSQSY bmy_05169T0/1-778 TQSSGPLRSF SCGFERTTKN EKLAAKTDEF NRIVFRTNRN CHAVQQSPSY BACU014286/1-192 ---------- ---------- ---------- ---------- ---------- 551 600 ENSP00000435150/1-694 SKSSEDLKPC DTSSTHTGSI SQSNDVSGIW KTNAHMPVPM ENVPDNPTKK ENSBTAP00000005116/1-693 SEQSEDLQRC ETLTACTDNV SVSESVSDVL KTSAPMPVPR ENVPDNSTKK ENSTTRP00000000891/1-648 SEPSEDLQPC DTLISCTDNI SESDSVSDIL KTSAPMPVPR ENVHDNSTKK bmy_05169T0/1-778 SEPSEDLQPC DTLISCTGNI SESDSVSDIL KTSAPMPVPR ENVHDNSTKK BACU014286/1-192 ---------- ---------- ---------- ---------- ---------- 601 650 ENSP00000435150/1-694 STTGLVRQMQ GHLSPRSYRN MLHEHDWRPS NLSGRPRSAD PRSNYGVVEK ENSBTAP00000005116/1-693 PTPGQFRQTR EPISPRSYRN MLHEHDWRPS SLSGRPRSAD PRSNYGVVEK ENSTTRP00000000891/1-648 PTTGLFRQMQ EHISPSSYRN MLHEHDWRPS NLSGRPRSAD PRSNYGVVEK bmy_05169T0/1-778 PTTGLFRQMQ EHISPSSYRN MLHEHDWRPS NLSGRPRSAD PRSNYGVVEK BACU014286/1-192 ---------- ---------- ---------- ---------- ---------- 651 700 ENSP00000435150/1-694 LLKTYETATE SALQNSKCFQ DNWTKCNSDV SGGATLSQHL EMLQMEQQFQ ENSBTAP00000005116/1-693 LLKTYETSAG SALQNSRCFQ AKWTKCSSDV SGGATLGQHL EKLQIEQELE ENSTTRP00000000891/1-648 LLKTYETSAG SALQNSKCFQ ANWTKCNSDV SGGVTLSQHL KKLQIEQELQ bmy_05169T0/1-778 LLKTYETSAG SALQNSKCFQ ANWTKCNSDV SGGATLSQHL KKFQIEQELQ BACU014286/1-192 ---------- ---------- ---------- ---------- ---------- 701 750 ENSP00000435150/1-694 QKTAVWGGQE VKQGIDPKKI TEESMSVNAS HGKGFSRPAR PANRRLPSRW ENSBTAP00000005116/1-693 HKTAMHGAQQ VRQGVDWKKV TEESMAVKSS PGKGFSRPAR PANRRLPSRW ENSTTRP00000000891/1-648 QKPAMCGAQQ VRQGADRKKV TEESVAVKCS HGKGFSRPAR PANRRLPSRW bmy_05169T0/1-778 QKPAMCGAQQ VKQGADRKEV TEESMAVKSS HGKGFSRPAR PANRRLPSRW BACU014286/1-192 ---------- ---------- ---------- ---------- ---------- 751 800 ENSP00000435150/1-694 ASRSPSAPPA LRRTTHNYTI SLRSEALMV ENSBTAP00000005116/1-693 ASRSPSAPPA LRRTAHNFPI PLRSEASMV ENSTTRP00000000891/1-648 ASRSPSAPPA LRRTVHNFPI SLRSEASMV bmy_05169T0/1-778 ASRSPSAPPA LRRTVHNFPI SLQSEASMV BACU014286/1-192 ---------- ---------- ---------