KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:25:41 2014 Check: 00 .. Name: ENSTTRP00000008185/1-824 Len: 885 Check: 9226 Weight: 1.00 Name: BACU019479/1-807 Len: 885 Check: 343 Weight: 1.00 Name: bmy_16965T0/1-800 Len: 885 Check: 3117 Weight: 1.00 Name: ENSP00000206765/1-817 Len: 885 Check: 8467 Weight: 1.00 Name: ENSBTAP00000005119/1-846 Len: 885 Check: 2987 Weight: 1.00 // 1 50 ENSTTRP00000008185/1-824 ------TTGS PRSDVGRWGG NPWQPLVTPS PEPEPEPDRH ARH-GRRPFW BACU019479/1-807 -----MTTGN PRSDVGRWGA NTWQPPVTPS PETEPEPDRH AGQ-GGSSFW bmy_16965T0/1-800 -----MTTSS PRSDVGRWGG NTWQPPMTPS PETEPEPDRN ARQ-GGRSFW ENSP00000206765/1-817 ------MMDG PRSDVGRWGG NPLQPPTTPS PEPEPEPDGR SRRGGGRSFW ENSBTAP00000005119/1-846 MPSPTPSSGG PRSDVGRWGG NPWQPPTTPS PEPEPEPDRR SRR-GGRSFW 51 100 ENSTTRP00000008185/1-824 ARCCGCCSCQ NTIDEDWGPE PGGDH---GS NSRPRRPSPR DRRPDTPGG- BACU019479/1-807 THFCGCCSCQ NAIDDDRRPE SRRDL---GS NFRDRGPSSG ---------- bmy_16965T0/1-800 AHCCGCCSCQ NAIDDDRRPE HHRDL---GS DFRDRGPSSR ---------- ENSP00000206765/1-817 ARCCGCCSCR NAADDDWGPE PSDSR-GRGS SSGTRRPGSR GSD------- ENSBTAP00000005119/1-846 ARCCGCCSCR NTEDDDWGPE RHGDRGGRGS GSRNRRPDSR GSDSRQPGSR 101 150 ENSTTRP00000008185/1-824 ---------- -RPNTL-GRR PDSRGSTVTT ARDDTIQEGK LVVTGVDLLS BACU019479/1-807 ---------- -------VRR PDPQPSTATA ARDGTIQEGM LVVTGVDLLS bmy_16965T0/1-800 ---------- -------SRR PDSRFSTVDT ARNGTIQEGT LVVTGVDLLS ENSP00000206765/1-817 ---------- -------SRR PVSRGSGVNA AGDGTIREGM LVVNGVDLLS ENSBTAP00000005119/1-846 DSRRPGSRDS RRPGSRDSRR PGSRGSAVNA AGDGTIREGM LVVTGVDLLS 151 200 ENSTTRP00000008185/1-824 SPSDQNRQEH HTDEFXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU019479/1-807 SPSDRNRQEH HTNEFEYNEL IIRRGQPFDM VLFLSRPYES SDHVTLELSI bmy_16965T0/1-800 SPWDRNRQEH HTNEFEYNEL IIRRGQPFNM VLFLSRPYES SDRVTLELFI ENSP00000206765/1-817 SRSDQNRREH HTDEYEYDEL IVRRGQPFHM LLLLSRTYES SDRITLELLI ENSBTAP00000005119/1-846 SRSDQNRREH HTDEFEYDEL ILRRGQPFQM VLFLSRPYES SDHVTLELCI 201 250 ENSTTRP00000008185/1-824 ---------- --XXNNPEVG KGTHVIIPVG QGGSGGWNAQ VTKSSGKNLN BACU019479/1-807 ---------- ---GNNPEVG KGTHVIIPVG QRGSGGWNAQ VTKSSGNNLN bmy_16965T0/1-800 DRLQQLINAS PTPGNNPEVG KGTHVIIPVG QGGSGGWKAE VTKSSGNNLN ENSP00000206765/1-817 ---------- ---GNNPEVG KGTHVIIPVG KGGSGGWKAQ VVKASGQNLN ENSBTAP00000005119/1-846 ---------- ---GNNPEVG KGTHVIIPVG KGGSGGWKAQ VTKSSGQNLN 251 300 ENSTTRP00000008185/1-824 LQVHTSPNAI IGKFQFTVRT CSEAGEFQLP FDPCNEIYIL FNPWCPXXXX BACU019479/1-807 LRVHTCPNAI IGKFQFTVRT HSGAGEFQLP FDPCNEIYIL FNPWCPGEPA bmy_16965T0/1-800 LRVHTCPNAI IGKFQFTVRT HSEAGEFQLP FDPCNEIYIL FNPWCPEDIV ENSP00000206765/1-817 LRVHTSPNAI IGKFQFTVRT QSDAGEFQLP FDPRNEIYIL FNPWCPEDIV ENSBTAP00000005119/1-846 LRVHTSPNAI IGKFQFTIRT RCEAGEFQLP FDPRNEIYIL FNPWCPEDIV 301 350 ENSTTRP00000008185/1-824 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XX---XXXXX BACU019479/1-807 GVRSKAWT-- ---------- -GGEGRSGLP FLGSG-YVPG YLALGEASLP bmy_16965T0/1-800 YVDREDWRQE YVLNESGRIY YGTETQVGER TWNYGQFDQG VL---DACLY ENSP00000206765/1-817 YVDHEDWRQE YVLNESGRIY YGTEAQIGER TWNYGQFDHG VL---DACLY ENSBTAP00000005119/1-846 YVDHEDWRQE YVLNESGRIY YGTEAQIGER TWNYGQFDHG VL---DACLY 351 400 ENSTTRP00000008185/1-824 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU019479/1-807 LSRQVGR--- GRGAGAGL-- ---GVTSALP PSSLTTGCWT PACTSWTGGA bmy_16965T0/1-800 VLDRRGMPYG GRRDPISVCR VVSAMVNSLD DSGILIGNWS GNYSRGTNPS ENSP00000206765/1-817 ILDRRGMPYG GRGDPVNVSR VISAMVNSLD DNGVLIGNWS GDYSRGTNPS ENSBTAP00000005119/1-846 ILDRRGMPYG GRGDPVSVSR VISAMVNSLD DNGVLIGNWS GDYSRGTNPS 401 450 ENSTTRP00000008185/1-824 XXXXXXXXXX XXXXXXXXXX XXXX------ ---------- -XXXXXXXX- BACU019479/1-807 CHMEAAGT-- PSMSAGSSLP CCPCPLATPD LVPHLPPPPL PWPRALNPNP bmy_16965T0/1-800 AWVGSVEILL SYLRTGLPVP YGQC------ ---------- -WVFAGVTT- ENSP00000206765/1-817 AWVGSVEILL SYLRTGYSVP YGQC------ ---------- -WVFAGVTT- ENSBTAP00000005119/1-846 AWVGSVEILL SYLRTGNSVP FGQC------ ---------- -WVFAGVTT- 451 500 ENSTTRP00000008185/1-824 ---XXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXHDSV BACU019479/1-807 GFHTVLRCLG LATRTITNFN SAHDTDTSLT MDIYFDENMK PLEHLNHDSI bmy_16965T0/1-800 ---TVLRCLG LATRTITNFN SAHDTDTSLT MDIYFDENMK PLEHLNHDSV ENSP00000206765/1-817 ---TVLRCLG LATRTVTNFN SAHDTDTSLT MDIYFDENMK PLEHLNHDSV ENSBTAP00000005119/1-846 ---TVLRCLG LATRTVTNFN SAHDTDTSLT MDIYFDENMK PLEHLNHDSV 501 550 ENSTTRP00000008185/1-824 WNFHVWNDCW MKRPDLPPGF DGWQVVDATP QETSSGIFCC GPCSVESVKN BACU019479/1-807 WNFHVWNDCW MKRPDLPSGF DGWQVVDSTP QETSSGIFCC GPCSVQSIKN bmy_16965T0/1-800 WNFHVWNDCW MKRPDLPSGF DGWQVVDATP QETSSA---- -----GKQNH ENSP00000206765/1-817 WNFHVWNDCW MKRPDLPSGF DGWQVVDATP QETSSGIFCC GPCSVESIKN ENSBTAP00000005119/1-846 WNFHVWNDCW MKRPDLPSGF DGWQVVDATP QETSSGIFCC GPCSVQSIKN 551 600 ENSTTRP00000008185/1-824 GLVYMKYDTP FIFAEVNSDK IYWQRQGDGS FKVVYVEEKA IGSLVVTKAV BACU019479/1-807 GLVYMKYDTP FIFAEVNSDK IYWQRQGDGS FKVVYVEEKA IGSLVVTKAV bmy_16965T0/1-800 GGLW------ -----VNSDK IYWQRQSDGS FKIVYVEEKA IGSLVVTKAV ENSP00000206765/1-817 GLVYMKYDTP FIFAEVNSDK VYWQRQDDGS FKIVYVEEKA IGTLIVTKAI ENSBTAP00000005119/1-846 GLVYMKYDTP FIFAEVNSDK VYWQRQDDGS FKIVYVEEKA IGSLIITKAI 601 650 ENSTTRP00000008185/1-824 GSNMREDVSH IYKHPEGSEA ERKAVETAAA HGSKPNVYAI RDSAEDVALK BACU019479/1-807 GSNMREEVSH IYKHPEGSEE ERKAVETAAA HGSKPNVYAT RDSAEDVALQ bmy_16965T0/1-800 GSNMQEVVSH IYKHPEGSEE ERKAVETAAA HGSKPNVYAI RDSAEDVALQ ENSP00000206765/1-817 SSNMREDITY LYKHPEGSDA ERKAVETAAA HGSKPNVYAN RGSAEDVAMQ ENSBTAP00000005119/1-846 GSNMREDITH TYKHPEGSEA ERKAVETAAA HGSKPNVYAT RDSAEDVAVQ 651 700 ENSTTRP00000008185/1-824 VEAQDAVMGQ DLTICVVLTN CGSSPRTVKL HLYLSVTYYT GVSGSVFKES BACU019479/1-807 VEAQDAVMGQ DLTVCVVLTN CSSSPRTVKL HLYLSVTFYT GVSGSVFKEC bmy_16965T0/1-800 VEAQDAVMGQ DLTICVVLTN CSSSPRTVKL HLYLSVTFYT GVSGSVFKES ENSP00000206765/1-817 VEAQDAVMGQ DLMVSVMLIN HSSSRRTVKL HLYLSVTFYT GVSGTIFKET ENSBTAP00000005119/1-846 VEAQDAVMGQ DLMVSVVLTN RGSSLRTVKL HLYLSVTFYT GVAGSVFKES 701 750 ENSTTRP00000008185/1-824 KKEVVLAPGA SERMAMPVAY KEYRVHLVDQ GAMLLNISGH VKENTQVLAK BACU019479/1-807 KKEVVLAPGA SERTAMPVAY KEYRVHLVDQ GTMLLNVSGH VKENTQVLAK bmy_16965T0/1-800 KKEVVLAPGA SERTAMPVAY KEYRVHLVDQ GTMLLNVSGH VKENTQVLAK ENSP00000206765/1-817 KKEVELAPGA SDRVTMPVAY KEYRPHLVDQ GAMLLNVSGH VKESGQVLAK ENSBTAP00000005119/1-846 KKEVVLAPGA SERVTMPVAY KEYRVHLVDQ GAMLLNISGH VKENGQVLAK 751 800 ENSTTRP00000008185/1-824 QHTFRLRTPD LTLTLLRAAV VGQVCEVQIV FQNPLPITLT NVVFRLEGSG BACU019479/1-807 QHTFRLRTPD LSLTLLRAAV VGQECEVQIV FQNPLPVTLT NVVFRLEGSG bmy_16965T0/1-800 QHTFRLRTPD LSLTLLRAAV VGQECEVQIV FQNPLPVTLT NVVFRLEGSG ENSP00000206765/1-817 QHTFRLRTPD LSLTLLGAAV VGQECEVQIV FKNPLPVTLT NVVFRLEGSG ENSBTAP00000005119/1-846 QHTFRLRTPD LSLTLLGAAV VGQECEVQIV FKNPLPVTLT NVVFRLEGSG 801 850 ENSTTRP00000008185/1-824 LQRPKTLNAG DIEGNKRVTL RQTFVPVRPG CRQLIASLDS PQLSQVHGVI BACU019479/1-807 LQRPKALNAG DIGGDKRVTL RQTFVPVRSG SRQLIASLDS PQLSQVHGVI bmy_16965T0/1-800 LQRPKALNAG DIGGDKRVTL RQTFVPVRPG SRQLIASLDS PQLSQVHGVI ENSP00000206765/1-817 LQRPKILNVG DIGGNETVTL RQSFVPVRPG PRQLIASLDS PQLSQVHGVI ENSBTAP00000005119/1-846 LQRPKILNVG DIGGNETVTL RQTFVPVRPG PRQLIASLDS PQLSQVHGVI 851 900 ENSTTRP00000008185/1-824 QVDVALAAG- GGGSSDTRGN GSSEETIPIA S-GGA BACU019479/1-807 QVDVAPAAG- GRDSSDTRGN GCSGETIPMA S---- bmy_16965T0/1-800 QVDVAPAAG- GRDSSDTRGN GRSGETIPMA S---- ENSP00000206765/1-817 QVDVAPAPGD GGFFSDAGGD SHLGETIPMA SRGGA ENSBTAP00000005119/1-846 QVDVAPASG- GGAFSDIRGS GRSGETIPMA SRGGA