KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:25:42 2014 Check: 00 .. Name: bmy_11024T0/1-388 Len: 523 Check: 2099 Weight: 1.00 Name: ENSBTAP00000005134/1-520 Len: 523 Check: 3431 Weight: 1.00 Name: ENSP00000343966/1-523 Len: 523 Check: 6696 Weight: 1.00 Name: ENSTTRP00000003131/1-519 Len: 523 Check: 3201 Weight: 1.00 Name: BACU000175/1-321 Len: 523 Check: 3606 Weight: 1.00 // 1 50 bmy_11024T0/1-388 ---------- ---------- ---------- ------MALA LPGEPPAPA- ENSBTAP00000005134/1-520 MMLRGNLKQV RIEKNPARLR ALESAAGEGD P---AALALA LPGEPPVPAA ENSP00000343966/1-523 MMLRGNLKQV RIEKNPARLR ALESAVGESE PAAAAAMALA LAGEPAPPAP ENSTTRP00000003131/1-519 MMLRGNLKQV RIEKNPARLR ALESAAGEGE P---AAMALA LPGEPPAPA- BACU000175/1-321 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_11024T0/1-388 VPAEDRPAEE GGFTIDIKSF LKPGEKTYTQ RCRLFVGNLP TDITEDDFKR ENSBTAP00000005134/1-520 PAGEDRPADE GGFTIDIKSF LKPGEKTYTQ RCRLFVGNLP TDITEDDFKR ENSP00000343966/1-523 APPEDHPDEE MGFTIDIKSF LKPGEKTYTQ RCRLFVGNLP TDITEEDFKR ENSTTRP00000003131/1-519 VPAEDRPAEE GGFTIDIKSF LKPGEKTYTQ RCRLFVGNLP TDITEDDFKR BACU000175/1-321 ---------- ---------- ---------- ---------- ---------- 101 150 bmy_11024T0/1-388 LFERYGEPSE ---------- ----ESRTLA EIAKAELDGT ILKSRPLRIR ENSBTAP00000005134/1-520 LFERYGEPSE VFINRDRGFG FIRLESRTLA EIAKAELDGT ILKSRPLRIR ENSP00000343966/1-523 LFERYGEPSE VFINRDRGFG FIRLESRTLA EIAKAELDGT ILKSRPLRIR ENSTTRP00000003131/1-519 LFERYGEPSE VFINRDRGFG FIRLESRTLA EIAKAELDGT ILKSRPLRIR BACU000175/1-321 ---------- ---------- ----ESRTLA EIAKAELDGT ILKSRPLRIR 151 200 bmy_11024T0/1-388 FATHGAALTV KNLSPVVSNE LLEQAFSQFG PVEKAVVVVD DRGRATGKGF ENSBTAP00000005134/1-520 FATHGAALTV KNLSPVVSNE LLEQAFSQFG PVEKAVVVVD DRGRATGKGF ENSP00000343966/1-523 FATHGAALTV KNLSPVVSNE LLEQAFSQFG PVEKAVVVVD DRGRATGKGF ENSTTRP00000003131/1-519 FATHGAALTV KNLSPVVSNE LLEQAFSQFG PVEKAVVVVD DRGRATGKGF BACU000175/1-321 FATHGAALTV KNLSPVVSNE LLEQAFSQFG PVEKAVVVVD DRGRATGKGF 201 250 bmy_11024T0/1-388 VEFAAKPPAR KALERCGDGA FLLTTTPRPV IVEPMEQFDD EDGLPEKLMQ ENSBTAP00000005134/1-520 VEFAAKPPAR KALERCGDGA FLLTTTPRPV IVEPMEQFDD EDGLPEKLMQ ENSP00000343966/1-523 VEFAAKPPAR KALERCGDGA FLLTTTPRPV IVEPMEQFDD EDGLPEKLMQ ENSTTRP00000003131/1-519 VEFAAKPPAR KALERCGDGA FLLTTTPRPV IVEPMEQFDD EDGLPEKLMQ BACU000175/1-321 VEFAAKPPAR KALERCGDGA FLLTTTPRPV IVEPMEQFDD EDGLPEKLMQ 251 300 bmy_11024T0/1-388 KTQQYHKERE QPPRFAQPGT FEFEYASRWK ALDEMEKQQR EQVDRNIREA ENSBTAP00000005134/1-520 KTQQYHKERE QPPRFAQPGT FEFEYASRWK ALDEMEKQQR EQVDRNIREA ENSP00000343966/1-523 KTQQYHKERE QPPRFAQPGT FEFEYASRWK ALDEMEKQQR EQVDRNIREA ENSTTRP00000003131/1-519 KTQQYHKERE QPPRFAQPGT FEFEYASRWK ALDEMEKQQR EQVDRNIREA BACU000175/1-321 KTQQYHK--E QPPRFAQPGT FEFEYASRWK ALDEMEKQQR EQVDRNIREA 301 350 bmy_11024T0/1-388 KEKLEAEMEA ARHEHQLMLM RQDLMRRQEE LRRLEELRNQ ELQKRKQIQL ENSBTAP00000005134/1-520 KEKLEAEMEA ARHEHQLMLM RQDLMRRQEE LRRLEELRNQ ELQKRKQIQL ENSP00000343966/1-523 KEKLEAEMEA ARHEHQLMLM RQDLMRRQEE LRRLEELRNQ ELQKRKQIQL ENSTTRP00000003131/1-519 KEKLEAEMEA ARHEHQLMLM RQDLMRRQEE LRRLEELRNQ ELQKRKQIQL BACU000175/1-321 KEKLEAEMEA ARHEHQLMLM RQDLMRRQEE LRRLEELRNQ ELQKRKQIQL 351 400 bmy_11024T0/1-388 RHEEEHRRRE EEMIRHREQE ELRRQQEGFK PNYMEN---- ---------- ENSBTAP00000005134/1-520 RHEEEHRRRE EEMIRHREQE ELRRQQEGFK PNYMENREQE MRMGDMGPRG ENSP00000343966/1-523 RHEEEHRRRE EEMIRHREQE ELRRQQEGFK PNYMENREQE MRMGDMGPRG ENSTTRP00000003131/1-519 RHEEEHRRRE EEMIRHREQE ELRRQQEGFK PNYMENREQE MRMGDMGPRG BACU000175/1-321 RHEEEHRRRE EEMIRHREQE ELRRQQEGFK PNYMEN---- ---------- 401 450 bmy_11024T0/1-388 ---------- ---------- ----LFKSHD SLVTLKLGP- ---------- ENSBTAP00000005134/1-520 AINMGDAFSP APAGNQGPPA MMGMNMNNRG TIPGPPMGPG PAMGPEGAAN ENSP00000343966/1-523 AINMGDAFSP APAGNQGPPP MMGMNMNNRA TIPGPPMGPG PAMGPEGAAN ENSTTRP00000003131/1-519 AINMGDAFSP APAGNQGPPP MMGMNMNNRG TIPGPPMGPG PAMGPEGAAN BACU000175/1-321 ---------- ---------- ---------- ---------- ---------- 451 500 bmy_11024T0/1-388 ---LMCFSFF TVHYKG---- -RNQMGPDLL DEVTEHESEI ---------- ENSBTAP00000005134/1-520 MGTPMMPDNG AVHNDRFPQG PPSQMGSPMG SRTGSETPQA PMSGVGPVSG ENSP00000343966/1-523 MGTPMMPDNG AVHNDRFPQG PPSQMGSPMG SRTGSETPQA PMSGVGPVSG ENSTTRP00000003131/1-519 MGTPMMPDNG AVHNDRFPQG PPSQMGSPMG SRTGSETPQA PMSGVGPGSG BACU000175/1-321 ---------- --HNDRFPQG PPSQMGSPMG SRTGSETPQA PMSGVGPGSG 501 550 bmy_11024T0/1-388 ---------- ---FREPN-- --W ENSBTAP00000005134/1-520 GPGGFGRGSQ GANFEGPNKR RRY ENSP00000343966/1-523 GPGGFGRGSQ GGNFEGPNKR RRY ENSTTRP00000003131/1-519 GPGGFGRGSQ GGNFEGPNKR RRY BACU000175/1-321 GPGGFGRGSQ GGNFEGPNKR RRY