KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:25:43 2014 Check: 00 .. Name: ENSTTRP00000015915/1-421 Len: 894 Check: 4111 Weight: 1.00 Name: bmy_05492T0/1-679 Len: 894 Check: 961 Weight: 1.00 Name: BACU008159/1-757 Len: 894 Check: 3071 Weight: 1.00 Name: ENSP00000347032/1-421 Len: 894 Check: 1780 Weight: 1.00 Name: ENSBTAP00000005146/1-363 Len: 894 Check: 4035 Weight: 1.00 // 1 50 ENSTTRP00000015915/1-421 ---------- ---------- ---------- ---------- ---------- bmy_05492T0/1-679 MSTPNRHALD FCTALLHFEN RELEVSERSQ REKTTAALSR SPPLGKAAQS BACU008159/1-757 ---------- ---------- ---------- ---------- ---------- ENSP00000347032/1-421 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000005146/1-363 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000015915/1-421 ---------- ---------- ---------- ---------- ---------- bmy_05492T0/1-679 AGPEPRLTCA DQESRPGRRA TVPFRGRRRE HRNRDKDGVR RLGPTQRPPP BACU008159/1-757 ---------- ---------- ---------- ---------- ---------- ENSP00000347032/1-421 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000005146/1-363 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000015915/1-421 ---------- ---------- ---------- -------MAS SSVPPATVPA bmy_05492T0/1-679 PRPGNARPPP APGPAEITFD LSLFKLSSCT RLGVRETMAS SSVPPATVPA BACU008159/1-757 ---------- ---------- ---------- -------MAS SSVPPATVPT ENSP00000347032/1-421 ---------- ---------- ---------- -------MAS SSVPPATVSA ENSBTAP00000005146/1-363 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000015915/1-421 PTAASGTGFG FASKTKKKHF VQQKVKVFRA ADPLMGVFLW GVAHSINELS bmy_05492T0/1-679 PTAASGTGFG FASKT-KKHF VQQKVKVFRA ADPLRGVFLW GVAHSINELS BACU008159/1-757 PTVASGTGFG FASKTKKKHF VQQKVKVFRA ADPLMGVFLW GVAHSINELS ENSP00000347032/1-421 ATAGPGPGFG FASKTKKKHF VQQKVKVFRA ADPLVGVFLW GVAHSINELS ENSBTAP00000005146/1-363 ---------- ---------- ---------- ---------- -----INELS 201 250 ENSTTRP00000015915/1-421 QVPPPVMLLP DDFKASSKIK VNNHLFRREN LPSHFKFKEY CPQVFRNLRD bmy_05492T0/1-679 QVPPPVMLLP DDLKASSKIK VNNQLFHREN LPSHFKFNEY CPQVFRNLRD BACU008159/1-757 QVPPPVMLLP DDFKASSKIK VNNHLFRREN LPSHFKFKEY CPQVFRNLRD ENSP00000347032/1-421 QVPPPVMLLP DDFKASSKIK VNNHLFHREN LPSHFKFKEY CPQVFRNLRD ENSBTAP00000005146/1-363 QVPPPVMLLP DDFKASSKIK VNNHLFHREN LPSHFKFKEY CPQVFRNLRD 251 300 ENSTTRP00000015915/1-421 RFGIDDQDYL VSLTRSPPSE SEGSDGRFLI SYDRTLVIKE VSSEDIADMH bmy_05492T0/1-679 RLGIDDQDYL VSLTRSPPSE SEGSDGRFLI SYDRTLVIKE VSSEDTADMH BACU008159/1-757 RFGIDDQDYL VSLTRSPPSE SEGSDGRFLI SYDRTLVIKE VSSEDIADMH ENSP00000347032/1-421 RFGIDDQDYL VSLTRNPPSE SEGSDGRFLI SYDRTLVIKE VSSEDIADMH ENSBTAP00000005146/1-363 RFGIDDQDYL VSLTRSPPTE SEGSDGRFLI SYDRTLVIKE VSSEDIADMH 301 350 ENSTTRP00000015915/1-421 SNLSNYHQXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_05492T0/1-679 SNLSSYHQYI VKCHGNTLLP QFLGMYRVSM DNEDSYMLVM HNMFSHRLPV BACU008159/1-757 SNLSNYHQYI VKCHGNTLLP PFLGMYRVSV DKEDSYMLVM RNMFSHRLPV ENSP00000347032/1-421 SNLSNYHQYI VKCHGNTLLP QFLGMYRVSV DNEDSYMLVM RNMFSHRLPV ENSBTAP00000005146/1-363 SNLSNYHQYI VKCHGNTLLP QFLGMYRVSV DSEDSYMLVM RNMFSHRLPV 351 400 ENSTTRP00000015915/1-421 XXXXXXXGSL VSREASDKEK VKELPTLKDM DFLNKNQKVY IAEEEKKVFL bmy_05492T0/1-679 HRKYDLKGSL VSREASDKEK VKELPTLKDM DFLNKNQKVS IAEEEKKVFL BACU008159/1-757 HRKYDLKGSL VSREASDKEK VKELPTLKDM DFLHQNQKVY IAEEEKKVFL ENSP00000347032/1-421 HRKYDLKGSL VSREASDKEK VKELPTLKDM DFLNKNQKVY IGEEEKKIFL ENSBTAP00000005146/1-363 HRKYDLKGSL VSREASDKEK VKELPTLKDM DFLNKNQKVY IGEEEKKVFL 401 450 ENSTTRP00000015915/1-421 EKLKRDVEFL VQLKIMDYSL LLGIHDIIRG SEPEEEGPVR EEESEGDGDC bmy_05492T0/1-679 EKLKRDVEFL VQLKIMDYSL LLGIHDIIRG SEPEEEGPVR EEESEGDGDC BACU008159/1-757 EKLKRDVEFL VQLKIMDYSL LLGIHDIIRG SEPEEEGPVR EEESEGDGDC ENSP00000347032/1-421 EKLKRDVEFL VQLKIMDYSL LLGIHDIIRG SEPEEEAPVR EDESEVDGDC ENSBTAP00000005146/1-363 EKLKRDVEFL VQLKIMDYSL LLGIHDIIRG SEPEEDGPVR EEESEGDGDC 451 500 ENSTTRP00000015915/1-421 ALTGPPALVG SYGTSPEGIG GYIHSHRPLG PGEFESFIDV YAIRSAEGAP bmy_05492T0/1-679 ALTGPPALVG SYGTSPEGIG GYIHSHRPLG PGEFESFIDV YAIRSAEGAP BACU008159/1-757 GLTGPPALVG SYGTSPEGIG GYIHSHRPLG PGEFESFIDV YAIRSAEGAP ENSP00000347032/1-421 SLTGPPALVG SYGTSPEGIG GYIHSHRPLG PGEFESFIDV YAIRSAEGAP ENSBTAP00000005146/1-363 GLTGPPAPVG SYGTSPEGIG GYIHSHRPLG PGEFESFIDV YAIRSAEGAP 501 550 ENSTTRP00000015915/1-421 QKEVYFMGLI DILTQYDAKK KAAHAAKTVK HGA------- ---------- bmy_05492T0/1-679 QKEVYFMGLI DILTQYDAKK KAAHAAKLSS MGRG------ ---------- BACU008159/1-757 QKEVYFMGLI DILTQYDAKK KAAHAAKTVK HGSWSAECGN RGISAALIVH ENSP00000347032/1-421 QKEVYFMGLI DILTQYDAKK KAAHAAKTVK HGA------- ---------- ENSBTAP00000005146/1-363 QKEVYFMGLI DILTQYDAKK KAAHAAKTVK HGA------- ---------- 551 600 ENSTTRP00000015915/1-421 ---------- ---------- ---------- ---------- ---------- bmy_05492T0/1-679 ---------- ---------- ------QRFL LSILSTVKST TEVQCLALGI BACU008159/1-757 GLSRMAACGG TCKNKVTVSK PVWDFLSKET PARLARLREE HRVSILIDGE ENSP00000347032/1-421 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000005146/1-363 ---------- ---------- ---------- ---------- ---------- 601 650 ENSTTRP00000015915/1-421 ---------- ---------- ---------- ---------- ---------- bmy_05492T0/1-679 PGIPTQVTAP SSSPVPLHPL PFRVVPRSIE ATWDDA---- ---------- BACU008159/1-757 TSDIYVLQLS PQGPPPAPPN GLYLARKALK GLLKEAEKEL KKAQRQEELL ENSP00000347032/1-421 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000005146/1-363 ---------- ---------- ---------- ---------- ---------- 651 700 ENSTTRP00000015915/1-421 -------GAE ISTVHP---- ---------- ---------- ---------- bmy_05492T0/1-679 -------GGT GPDLETIELK QPRASLPWPP SADGAP---- ---------- BACU008159/1-757 GCLALGGGGE HPELHRPGPP PLRAAPLLPP GARGLPPPPP PLPPPLPPRL ENSP00000347032/1-421 -------GAE ISTVHP---- ---------- ---------- ---------- ENSBTAP00000005146/1-363 -------GAE ISTVHP---- ---------- ---------- ---------- 701 750 ENSTTRP00000015915/1-421 ---------- ---------- ---------- ---------- ---------- bmy_05492T0/1-679 ---------- ---------- ---------- ---------- --------LG BACU008159/1-757 REEAEEQEST CPICLGEIQN AKTLEKCRHS FCEGCITRAL QVKKACPMCG ENSP00000347032/1-421 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000005146/1-363 ---------- ---------- ---------- ---------- ---------- 751 800 ENSTTRP00000015915/1-421 ---------- ---------- ---------E QYAKRFLDFI ---------- bmy_05492T0/1-679 GAYWRGGGRG GRAGKGRAGR PCSAPQRPSR KRSRR----- ---------- BACU008159/1-757 RFYGQLVGNQ PQNGRMLVSK DATLLLPSYE KYGTIVIQYV FPPGVRGAEH ENSP00000347032/1-421 ---------- ---------- ---------E QYAKRFLDFI ---------- ENSBTAP00000005146/1-363 ---------- ---------- ---------E QYAKRFLDFI ---------- 801 850 ENSTTRP00000015915/1-421 ---------- ---------- ---------- ---------- ---------- bmy_05492T0/1-679 ---------- ---------- ---------- ---------- ---------- BACU008159/1-757 PNPGVRYPGT TRVAYLPDCP EGNKVLTLFR KAFDQRLTFT IGTSMTTGRP ENSP00000347032/1-421 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000005146/1-363 ---------- ---------- ---------- ---------- ---------- 851 900 ENSTTRP00000015915/1-421 ---------- -------TNI FA-------- ---------- ---- bmy_05492T0/1-679 ---------- --PCGAGALT HGARERERER KG-------- ---- BACU008159/1-757 NVITWNDIHH KTSCTGGPQL FGYPDPTYLT RVQEELRAKG ITDD ENSP00000347032/1-421 ---------- -------TNI FA-------- ---------- ---- ENSBTAP00000005146/1-363 ---------- -------TNI FA-------- ---------- ----