KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:25:43 2014 Check: 00 .. Name: ENSP00000289388/1-387 Len: 444 Check: 4182 Weight: 1.00 Name: ENSTTRP00000012247/1-384 Len: 444 Check: 8880 Weight: 1.00 Name: ENSBTAP00000005147/1-379 Len: 444 Check: 6531 Weight: 1.00 Name: bmy_03174T0/1-413 Len: 444 Check: 319 Weight: 1.00 Name: BACU020019/1-386 Len: 444 Check: 2938 Weight: 1.00 // 1 50 ENSP00000289388/1-387 -----MSSKV YSTGSRAKDH QPSGPECLPL PEANAEAIDF LSSLH----- ENSTTRP00000012247/1-384 -----MSSKV QSKGFKAKDH QPSAQESLPP PEANAEAVNF LNSLX----- ENSBTAP00000005147/1-379 -----MSSKV QSKGSKAKIH QPSTQGNLPP PEANAEAIHF LNSLR----- bmy_03174T0/1-413 GPPSAVSTSP LSIGSKAKDH QSSAQESLPP PEANAEAIHF LNSLQVNGGE BACU020019/1-386 -----MSSKV QSKGSKAKDH QPSAQESLPP LEANVEAIHF LNSLR----- 51 100 ENSP00000289388/1-387 ---------- ---------- ---------- ---------- ------KEEL ENSTTRP00000012247/1-384 ---------- ---------- ---------- ---------- ------XXXX ENSBTAP00000005147/1-379 ---------- ---------- ---------- ---------- ------QEEL bmy_03174T0/1-413 AGATWGTWDE EGVGGDCGRT GGLGVRELRP RSWGFNCPHG TLTHPGQEEL BACU020019/1-386 ---------- ---------- ---------- ---------- ------QEEL 101 150 ENSP00000289388/1-387 QMLFFSETLA MVSDTGEPQG ELTIEVQRGK YQEKLGMLTY CLFVHASSRG ENSTTRP00000012247/1-384 XXXXXXXXXX XXXXXXXXXX XXXXXXXRGK YKDQFGVTEY FPFVHAFSRS ENSBTAP00000005147/1-379 LLLFFSETLV MVSDTGEPQG ELTIEVQRGK YKDQSGVITY FPFVHASSRG bmy_03174T0/1-413 LMLFFSETLV MVSDAGEPQG ELTIEVQRGK YKDQFGVMAY FPFVHAFSRG BACU020019/1-386 LMLFFSETLV MVSDAGEPQG ELTIEVQRGK YKDQFGVMAY FPFVHAFSRG 151 200 ENSP00000289388/1-387 FLDKMLCGNS LLGYLSEKLE LMEQHSQDFI KFLILPMERK MSLLKQDDQL ENSTTRP00000012247/1-384 SMDKIPCGNS ILGYLSWKLE VVEQHNKEFI KFHALPMERK MSLLKQDDQL ENSBTAP00000005147/1-379 FMDKTLCGSS LLAYLSWKLE VVEQQSQEFI KFHILPMEQK MSLLKQDDQL bmy_03174T0/1-413 FMDKILCGNS ILGYLSWKLE VVEQHNQEFI K--------- ---------- BACU020019/1-386 FMDKILCGNS ILGYLSWKLE VVEQHNQEFI KFHVLPMERK MSLLKQDDQL 201 250 ENSP00000289388/1-387 AVTRSIKEGE EVKTGVTSFP WSSIKGFISE AANLVLLRVM AWRRMVPSNA ENSTTRP00000012247/1-384 AMTRIIKEGE EVKTEVTFFP WHSIAGFVSQ AANLVLLRVM AWRQTVPSNA ENSBTAP00000005147/1-379 AMTRMVKEGE EVKTEVTFFP RPSTEGFVSQ AANLVLLRVM AWRHTVPSNA bmy_03174T0/1-413 ---------- EVKTEVTFFP WHSIAGFVSQ AANLVLLRVM AWRQTVPSNA BACU020019/1-386 AVTRIIKEGE EVKTEVTFFP WHSIAGFVSQ AANLVLLRVM AWRQTVPSNA 251 300 ENSP00000289388/1-387 RFLTLDTEGK LCYLTYQNLG FQTIQVDHQQ AEVFIVEQTV HAEEGIPMSC ENSTTRP00000012247/1-384 RFLALDTEGK LCYSTYQGLG SQTIQVGHQQ VEAFIVEQTV HSEEGIPVSC ENSBTAP00000005147/1-379 RFLALDTEGK LCCSTYQALG SQTIQVGHQQ VEVFIVEQTV HSEQGIPMSC bmy_03174T0/1-413 RFLALDTEGK LCYSTYQGLG SQTIQVGHQQ VEVFIVEQTI HSEQGIPVSC BACU020019/1-386 RFLALDTEGK LCYSTYQGLG SQTIQVGHQQ VEVFIVEQTV HSEQGIPVSC 301 350 ENSP00000289388/1-387 QYYLLSDGHL AKRIQVGSPG CCIITKMPIL REEDEIEPRP VFEKKPLVWE ENSTTRP00000012247/1-384 QFYLLSDGHL AKRIQVGSPG CCMITKVPTL REVDDIEPQP VFEKKPLVWE ENSBTAP00000005147/1-379 QFYLLSDGHL AKRIQVGSPG CCMITKVPVL REEDDIEPRP VFKKKPLVWE bmy_03174T0/1-413 QFYLLSDGHL AKRIQVGSPG CCMITKVPIL REEDDIEPHP VFEKKPLVWE BACU020019/1-386 QFYLLSDGHL AKRIQVGSPG CCMITKVPIL REEDDIEPHP VFEKKPLVWE 351 400 ENSP00000289388/1-387 EDMELYSKFL DRKEELRLGH ASYLRQHPEA HALISDFLLF LLLRQPEDVV ENSTTRP00000012247/1-384 EDMELYSKFV DRKEELRLSH NSYLRQHPEA QALISDFLLF LLLHQPADVV ENSBTAP00000005147/1-379 EDLELYSRFL DRKEELRLSH NSYLRQHPEA QALISDFLLF LLLRQPVDVV bmy_03174T0/1-413 EDMELYSRFV ARKEELRLSH NSYLRQHPEA QALISDFLLF LLLRQPADVV BACU020019/1-386 EDMELYSRFV ARKEELRLSH NSYLRQHPEA RALISDFLLF LLLRQPADVV 401 450 ENSP00000289388/1-387 TFAAEFFGPF DPWRPSSPAL GSSHRPNPFR SLEPEG-DAR SGAA ENSTTRP00000012247/1-384 TFAAEYFGPF AMRRPPTPSL RSSNRPCPFH ELEPEG--SR AG-- ENSBTAP00000005147/1-379 TFAAEYFGPF AKRRSPTPAL RSSNRPSPFR ELEPE----- ---- bmy_03174T0/1-413 TFAAEYFGPF AMRRPPTPAL RSSNRPCPFH ELEPEGLEGE EG-- BACU020019/1-386 TFAAEYFGPF AMRRPPTPAL RSSNRPCPFH ELEPEGLEGE EG--