KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:25:44 2014 Check: 00 .. Name: bmy_17630T0/1-460 Len: 527 Check: 153 Weight: 1.00 Name: ENSTTRP00000015917/1-422 Len: 527 Check: 7917 Weight: 1.00 Name: BACU014642/1-367 Len: 527 Check: 6071 Weight: 1.00 Name: ENSP00000417601/1-423 Len: 527 Check: 8565 Weight: 1.00 Name: ENSBTAP00000005160/1-423 Len: 527 Check: 8727 Weight: 1.00 // 1 50 bmy_17630T0/1-460 MVFSNNDEGL INKKLPKELL LRMLFSL--- ---------- ---------- ENSTTRP00000015917/1-422 -VFSNNDEGL INKKLPKELL LRIFSFLDIV TLCRCAQISK AWNILALDGS BACU014642/1-367 ---------- ---------- ---------- ---------- ---------- ENSP00000417601/1-423 MVFSNNDEGL INKKLPKELL LRIFSFLDIV TLCRCAQISK AWNILALDGS ENSBTAP00000005160/1-423 MVFSNNDEGL INKKLPKELL LRIFSFLDIV TLCRCAQISK AWNILALDGS 51 100 bmy_17630T0/1-460 ------LLNF ---------T WSNPECTKYV RSIGLDSFCN VQLAGSFKMF ENSTTRP00000015917/1-422 NWQRIDLFNF QTDVEXXXXX XXXXXXXXXX XXXXXXXXXX XX-------X BACU014642/1-367 --MKQDFFQL -SPLKGRVVE NISKRCGGFL RKLSLRGCIG VG-------D ENSP00000417601/1-423 NWQRIDLFNF QTDVEGRVVE NISKRCGGFL RKLSLRGCIG VG-------D ENSBTAP00000005160/1-423 NWQRIDLFNF QTDVEGRVVE NISKRCGGFL RKLSLRGCIG VG-------D 101 150 bmy_17630T0/1-460 SHFRTFAQNC RNIEHLNLNG CTKITDSTCY SLSRFCSKLK HLDLTSCVSI ENSTTRP00000015917/1-422 XXXXTFAQNC RNIEHLNLNG CTKITDSTCY SLSRFCSKLK HLDLTSCVSI BACU014642/1-367 SSLKTFAQNC RNIEHLNLNG CTKITD---- ---------- ---------- ENSP00000417601/1-423 SSLKTFAQNC RNIEHLNLNG CTKITDSTCY SLSRFCSKLK HLDLTSCVSI ENSBTAP00000005160/1-423 SSLKTFAQNC RNIEHLNLNG CTKITDSTCY SLSRFCSKLK HLDLTSCVSI 151 200 bmy_17630T0/1-460 TNNSLKGISE GCRHLEYLNL SWCDQITKDG IEALVRGCRG LRALLLRGCT ENSTTRP00000015917/1-422 TNSSLKGISE GCRHLEYLNL SWCDQITKDG IEALVRGCRG LRALLLRGCT BACU014642/1-367 --------SE GCRHLEYLNL SWCDQITKDG IEALVRGCRS LRALLLRGCT ENSP00000417601/1-423 TNSSLKGISE GCRNLEYLNL SWCDQITKDG IEALVRGCRG LKALLLRGCT ENSBTAP00000005160/1-423 TNSSLKGISE GCRHLEYLNL SWCDQITKDG VEALVRGCRG LRALLLRGCT 201 250 bmy_17630T0/1-460 QLEDEALKHI QNYCHELVSL NLQSCSRITD EGVVQICRGC HWLQALCLSG ENSTTRP00000015917/1-422 QLEDEALKHI QNYCHELVSL NLQSCSRVTD EGVVQICRGC HRLQALCLSG BACU014642/1-367 QLEDEALKHI QNYCHELVSL NLQSCSRITD EGVVQICRGC HRLQALCLSG ENSP00000417601/1-423 QLEDEALKHI QNYCHELVSL NLQSCSRITD EGVVQICRGC HRLQALCLSG ENSBTAP00000005160/1-423 QLEDEALKHI QNYCHELVSL NLQSCSRVTD DGVVQLCRGC PRLQALCLSG 251 300 bmy_17630T0/1-460 CGNLTDASLT ALALNCPRLQ ILEAARCSHL TDAGFTLLAR ---------- ENSTTRP00000015917/1-422 CGNLTDASLT ALALNCPRLQ ILEAARCSHL TDAGFTLLAR ---------- BACU014642/1-367 CGNLTDASLT ALALNCPRLQ ILEAARCSHL TDAGFTLLAR PSTIRTVAGH ENSP00000417601/1-423 CSNLTDASLT ALGLNCPRLQ ILEAARCSHL TDAGFTLLAR ---------- ENSBTAP00000005160/1-423 CGSLTDASLT ALALNCPRLQ ILEAARCSHL TDAGFTLLAR ---------- 301 350 bmy_17630T0/1-460 ---------- ---------N CHDLEKMDLE ECILITDSTL IQLSIHCPKL ENSTTRP00000015917/1-422 ---------- ---------N CHDLEKMDLE ECILITDSTL IQLSIHCPKL BACU014642/1-367 PPPRPPRAHS MAEISVLIPN CHDLEKMDLE ECILITDSTL IQLSIHCPKL ENSP00000417601/1-423 ---------- ---------N CHELEKMDLE ECILITDSTL IQLSIHCPKL ENSBTAP00000005160/1-423 ---------- ---------N CHDLEKMDLE ECILITDRTL TQLSIHCPKL 351 400 bmy_17630T0/1-460 QALSLSHCEL ITDDGILHLS NSPCGHERLR VLELDNCLLI TDVALEHLEN ENSTTRP00000015917/1-422 QALTLSHCEL ITDDGILHLS NSPCGHERLR VLELDNCLLI TDVALEHLEN BACU014642/1-367 QALSLSHCEL ITDDGILHLS NSPCGHERLR VLELDNCLLI TDVALEHLEN ENSP00000417601/1-423 QALSLSHCEL ITDDGILHLS NSTCGHERLR VLELDNCLLI TDVALEHLEN ENSBTAP00000005160/1-423 QALSLSHCEL ITDDGILHLS NSPCGHERLR VLELDNCLLI TDVALEHLEH 401 450 bmy_17630T0/1-460 CRGLERLELY DCQQVTRAGI KRMRFTCIIL EYALSLGNFA LRPLSSPRCY ENSTTRP00000015917/1-422 CRGLERLELY DCQQVTRAGI KRMRAQL--- ---------- ---------- BACU014642/1-367 CRGLERLELY DCQQVTRAGI KRMRAQL--- ---------- ---------- ENSP00000417601/1-423 CRGLERLELY DCQQVTRAGI KRMRAQL--- ---------- ---------- ENSBTAP00000005160/1-423 CRGLERLELY DCQQVTRAGI KRMRAQL--- ---------- ---------- 451 500 bmy_17630T0/1-460 SCYISTRFAH RDGDHPFVFK RPSSLMSKSM PTLLLSPRRQ QWEEVDSGYA ENSTTRP00000015917/1-422 ---------- -----PHV-- ---------- ---------- ---KVHAYFA BACU014642/1-367 ---------- -----PHV-- ---------- ---------- ---KVHAYFA ENSP00000417601/1-423 ---------- -----PHV-- ---------- ---------- ---KVHAYFA ENSBTAP00000005160/1-423 ---------- -----PHV-- ---------- ---------- ---RVHAYFA 501 550 bmy_17630T0/1-460 GAVSSSDSSC LAQGFMRCPF LPRTRVF ENSTTRP00000015917/1-422 PVTPPTAVGG SGQRLCRCCV IL----- BACU014642/1-367 PVTPPTAVGG SGQRLCRCCV IL----- ENSP00000417601/1-423 PVTPPTAVAG SGQRLCRCCV IL----- ENSBTAP00000005160/1-423 PVTPPTAAGG GGPRLCRCCV IL-----