KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:25:45 2014 Check: 00 .. Name: ENSP00000234071/1-461 Len: 648 Check: 2871 Weight: 1.00 Name: ENSBTAP00000005163/1-480 Len: 648 Check: 3261 Weight: 1.00 Name: ENSTTRP00000010968/1-458 Len: 648 Check: 2331 Weight: 1.00 Name: bmy_10440T0/1-462 Len: 648 Check: 7721 Weight: 1.00 Name: BACU009909/1-500 Len: 648 Check: 4009 Weight: 1.00 // 1 50 ENSP00000234071/1-461 ---------- ---------- -MWQLTSLLL FVATWGISGT PAP------- ENSBTAP00000005163/1-480 MAAGGQPCSF SAAHPSGCSF RMWQLTSLLL FVTIWGISST PAP------- ENSTTRP00000010968/1-458 ---------- ---------- -MWRLTGLLL FVTIWGVSSA PAP------- bmy_10440T0/1-462 ---------- ---------- ---------- ----MGL--- ---------- BACU009909/1-500 ------MVKC PVLRWPATCF GRRRRAGEEE RVSVPGIIIL RDPRRKPPQG 51 100 ENSP00000234071/1-461 ---------- ---------- LDSVFSSSER AHQVLRIRKR ANSFLEELRH ENSBTAP00000005163/1-480 ---------- ---------- PDSVFSSSQR AHQVLRIRKR ANSFLEELRP ENSTTRP00000010968/1-458 ---------- ---------- PDSVFSSHRR AHQVLRIRKR ANTFLEELRP bmy_10440T0/1-462 ---------- ---------- ---------- ---------- ---------- BACU009909/1-500 LPSRAPSLRA PHQRELPVTL PDSVFSSHQR AHQVLRIRKR ANTFLEELRP 101 150 ENSP00000234071/1-461 SSLERECIEE ICDFEEAKEI FQNVDDTLAF WSKHVDGDQC LVLPLEHPCA ENSBTAP00000005163/1-480 GNVERECSEE VCEFEEAREI FQNTEDTMAF WSKYSDGDQC EDRPSGSPCD ENSTTRP00000010968/1-458 GSLERECTEE TCEFEEAREI FQNMEDTMAF WSKYHDGDQC AAPPPEHPCD bmy_10440T0/1-462 ---------- ---------- ---------- ---------- ---------- BACU009909/1-500 GSLERECREE TCEFEEAREI FQNMEDTMAF WSKYHEARFS NCSAENGGCA 151 200 ENSP00000234071/1-461 SLCCGHGTCI DGIGSFSCDC RSGW----EG RFCQ-REVSF LNCSLDNGGC ENSBTAP00000005163/1-480 LPCCGRGKCI DGLGGFRCDC AEGW----EG RFCL-HEVRF SNCSAENGGC ENSTTRP00000010968/1-458 SPCCGRGTCI DGLGGFRCDC R-GW----EG RFCL-QEARF SNCSAENGGC bmy_10440T0/1-462 ---------- ---------- ---------- -----QEARF SNCSAENGGC BACU009909/1-500 HY------CL EEEDRRHCRC APGYRLGDDH LLCEPREARF SNCSAENGGC 201 250 ENSP00000234071/1-461 THYCLEEVGW RRCSCAPGYK LGDDLLQCHP AVKFPCGRPW KRMEKKRSHL ENSBTAP00000005163/1-480 AHYCMEEEGR RHCSCAPGYR LEDDHQLCVS KVTFPCGRLG KRMEKKRKTL ENSTTRP00000010968/1-458 AHYCLEEEGR RHCRCAPGYR LGDDHLLCEP KVTFPCGRPG KRMEKKRKNL bmy_10440T0/1-462 AHYCLEEEGG RHCRCAPGYR LGDDHLLCEP KVTFPCGRPG KQMEKKRKNL BACU009909/1-500 AHYCLEEEDR RHCRCAPGYR LGDDHLLCEP RVTFPCGRPG KRMEKKRKNL 251 300 ENSP00000234071/1-461 KRDTE--DQE DQVDPRLIDG KMTRRGDSPW Q--------- ---------- ENSBTAP00000005163/1-480 KRDTNQVDQK DQLDPRIVDG QEAGWGESPW Q--------- ---------- ENSTTRP00000010968/1-458 KRDTDQVDQE GQLDPRLISG QEAGWGESPW Q--------- ---------- bmy_10440T0/1-462 KRDTDQVDQE GQLDPRLISG QEAGWGESPW QALGWGDCPE INKQETGRSW BACU009909/1-500 KRDTDQVDQE GQLDPRLISG QEAGWGESPW Q--------- ---------- 301 350 ENSP00000234071/1-461 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000005163/1-480 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010968/1-458 ---------- ---------- ---------- ---------- ---------- bmy_10440T0/1-462 GAHSPQEVQA PEHTATQWDQ SRWQDRDRGN PERTPKAAWG PQRLLKGLED BACU009909/1-500 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000234071/1-461 ------VVLL DSKKKLACGA VLIHPSWVLT AAHCMDESKK LLVRLG---- ENSBTAP00000005163/1-480 ------AVLL DSKKKLVCGA VLIHVSWVLT VAHCLDSRKK LIVRLG---- ENSTTRP00000010968/1-458 ------VILL DSKKKLACGA VLVHVSWVLT AAHCLDDRRK LIVRLG---- bmy_10440T0/1-462 QPEPPRVVLL DSKKKLTCGA VLVHVSWVLT AAHCLDDRKK LIVRLGAGWN BACU009909/1-500 ------VVLL DSKKKLACGA VLVHVSWVLT AAHCLEDGKK LIVRLG---- 401 450 ENSP00000234071/1-461 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000005163/1-480 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010968/1-458 ---------- ---------- ---------- ---------- ---------- bmy_10440T0/1-462 QAGGVAQTGW PGLGRLVSGV LEQEDTRAAQ KASGGKRPVC SLPATLWRHF BACU009909/1-500 ---------- ---------- ---------- ---------- ---------- 451 500 ENSP00000234071/1-461 ---EYDLRRW EKWELDLDIK EVFVHPNYSK STTDNDIALL HLAQPATLSQ ENSBTAP00000005163/1-480 ---EYDMRRW ESWEVDLDIK EVIIHPNYTK STSDNDIALL RLAKPATLSQ ENSTTRP00000010968/1-458 ---EYDLRRW EKWEVDLDIK EVFVHPNYTK STSDNDIALL HLAQPATLSQ bmy_10440T0/1-462 RHREYDLRRW EKWEVDLDIK EVFVHPNYTK STSDNDIALL RLARPAILSQ BACU009909/1-500 ---EYDLRRW EKWEVDLDIK EVFVHPNYTK STSDNDIALL RLARPAPPSQ 501 550 ENSP00000234071/1-461 TIVPICLPDS GLAERELNQA GQETLVTGWG YHSSREKEAK RNRTFVLNFI ENSBTAP00000005163/1-480 TIVPICLPDS GLSERKLTQV GQETVVTGWG YRD----ETK RNRTFVLSFI ENSTTRP00000010968/1-458 TIVPICLPDS GLSERELTQV GQETVVTGWG YRS----EAK RNRTFVLNFV bmy_10440T0/1-462 TIVPICLPDS GLSERELTQV GQETVVTGWG YRN----EAK RNRTFVLNFV BACU009909/1-500 TIVPICLPDS GLSERELTQV GQETVVTGWG YRS----EAK RNRTFVLNFV 551 600 ENSP00000234071/1-461 KIPVVPHNEC SEVMSNMVSE NMLCAGILGD RQDACEGDSG GPMVASFHGT ENSBTAP00000005163/1-480 KVPVVPYNAC VHAMENKISE NMLCAGILGD PRDACEGDSG GPMVTFFRGT ENSTTRP00000010968/1-458 RVPLVPHNMC VLAMQNKISE NMLCAGILGD SRDACEGDSG GPMVVSFRGT bmy_10440T0/1-462 KVPLVPHNMC VLAMQNKISE NMLCAGILGD PRDACEGDSG GPMVVSFRGT BACU009909/1-500 KVPLVPHNMC VLAMQNKISE NMLCAGILGD PRDACEGDSG GPMVVSFRGT 601 650 ENSP00000234071/1-461 WFLVGLVSWG EGCGLLHNYG VYTKVSRYLD WIHGHIRDKE APQKSWAP ENSBTAP00000005163/1-480 WFLVGLVSWG EGCGRLYNYG VYTKVSRYLD WIYGHIKAQE APLESQVP ENSTTRP00000010968/1-458 WFLVGLVSWG EGCGRLNNYG VYTKVSRYLD WIHSYINAKE APLESQVP bmy_10440T0/1-462 WFLVGLVSWG EGCGRLNNYG VYTKVSRYLD WIHGYINPKE APLESQVP BACU009909/1-500 WFLVGLVSWG EGCGRLNNYG VYTKVSRYLD WIHGYINPKE APLESQVP