KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:25:46 2014 Check: 00 .. Name: ENSP00000370803/1-1012 Len: 1040 Check: 285 Weight: 1.00 Name: ENSBTAP00000005166/1-1006 Len: 1040 Check: 4030 Weight: 1.00 Name: ENSTTRP00000002300/1-1013 Len: 1040 Check: 5176 Weight: 1.00 Name: bmy_06285T0/1-974 Len: 1040 Check: 9323 Weight: 1.00 Name: BACU018269/1-998 Len: 1040 Check: 2330 Weight: 1.00 // 1 50 ENSP00000370803/1-1012 ---------- ---------- -------MEE YEKFCEKSLA RIQEASLSTE ENSBTAP00000005166/1-1006 ---------- ---------- -------MEE YEKFCEKSLS RIQEASLSTE ENSTTRP00000002300/1-1013 ---------- ---------- -------MEE YEKFCEKILA RIQEASLATE bmy_06285T0/1-974 MLRCWHRLGG VRDGALSEEL GECDCGKMEE YEKFCEKILA RIQEASLSTE BACU018269/1-998 ---------- ---------- -------MEE YEKFCEKILA RIQEASLSTE 51 100 ENSP00000370803/1-1012 SFLPAQSESI SLIRFHGVAI LSPLLNIEKR KEMQQEKQKA LDVEARKQVN ENSBTAP00000005166/1-1006 SFLPVQSESI SLIRFHGVAV LSPLLNIEKR KEMQQEKQKA LDVEARRQVN ENSTTRP00000002300/1-1013 SFLPVQSESI SLIRFHGVAV LSPLLNIEKR KEMQQEKQKA LDVEGRKQVN bmy_06285T0/1-974 SFLPVQSESI SLIRFHGVAV LSPLLNIEKR KEMQQEKQKA LDVEARKQVN BACU018269/1-998 SFLPVQSESI SLIRFHGVAV LSPLLNIEKR KEMQQEKQKA LDVEARKQVN 101 150 ENSP00000370803/1-1012 RKKALLTRVQ EILDNVQVRK APNASDFDQW EMETVYSNSE VRNLNVPATF ENSBTAP00000005166/1-1006 RKKALLSRVQ EILENVQVRK APDASDFHQW ETETVYSNSE VRNLNVPATL ENSTTRP00000002300/1-1013 RNRALLTRVQ EILENVQVRK APNACDFDQW ETETVYSNSE VRNLNVPATL bmy_06285T0/1-974 RKRALLTRVQ EILENV---- --------QW ETETVYSNSE VRNLNVPATL BACU018269/1-998 RKRALLTRVQ EILENVQVRK APNACDFDQW ETETVYSNSE VRNLNVPATL 151 200 ENSP00000370803/1-1012 PNSFPSHTEH STAAKLDKIA GILPLDNEDQ CKTDGIDLAR DSEGFNSPKQ ENSBTAP00000005166/1-1006 PNILPSPTEH STLAEFEKIT GILPLNNEDR FKSNRIDLAR DSEELSYLKQ ENSTTRP00000002300/1-1013 PNILPSPTEH STLAKFEKIP GILPLNTEDQ FKSNGVDLAR DSEEFNCLKQ bmy_06285T0/1-974 PNILPNPTEH STLAKFEKIT GILPLNTEDQ FKSNGIDLAR DSEEFXYLKQ BACU018269/1-998 PNILPSPTEH STLAKFEKIT GILPLNTEDQ FKSNGIDLAR DSEEFNYLKQ 201 250 ENSP00000370803/1-1012 CDSSNISHVE NEAFPKTSSA TPQETLISDG PFSVNEQQDL PLLAEVIPDP ENSBTAP00000005166/1-1006 CDSSNISQAE NEASLKTSST AAQETLTSDV LFPTNEEQDP SLLEEVTPDP ENSTTRP00000002300/1-1013 CDSSNISHAE NEASLKTSSA AAQELLISGG LFPTNEEQDP SLVGEVTPDP bmy_06285T0/1-974 CDSSSISHAE NEASLKTSST AAQEPLISGG LFPTNEEQDP SLLEEVTPDP BACU018269/1-998 CDSSNISHAE NEASLKTSST AAQEPLISGG LFPTNEEQDP SLLEEVTPDP 251 300 ENSP00000370803/1-1012 YVMSLQNLMK KSKEYIEREQ SRRSLRGSIN RIVNESHLDK EHDAVEVADC ENSBTAP00000005166/1-1006 YIMSLQNLMK KSKEYIEREQ SRRSLRSSVK RSVNESHSDK ENDAVKVTDN ENSTTRP00000002300/1-1013 YIMSLQKLMK KSKEYIEREQ SRHSLRSSAK RSVSESYSDK ENDAVKVTDC bmy_06285T0/1-974 YIMSLQKLMK KSKEYIEREQ SRHSLRSSAK RSVNESYSDK ENDAVKVTDC BACU018269/1-998 YIMSLQKLMK KSKEYIEREQ SRHSLRSSAK RSVNESYSDK ENDALKVTDC 301 350 ENSP00000370803/1-1012 VKEKGQLTGK HCVSVIPDKP SLNKSNVLLQ GASTQASSMS MPVLASFSKV ENSBTAP00000005166/1-1006 GKEKSPLIGK HCGSVIPDKP SLNKSNVLLQ GAFTQASSMN TSVLGNFSKV ENSTTRP00000002300/1-1013 EKEKAQLMGR HCGSVIPDKP SLNKSNVLLQ GASTQASSVN TSILGSFSKV bmy_06285T0/1-974 EKEKAQLMGK HCGSVIPDKP SLNKSNVLLQ GASTQASSVN TSILGSFSKV BACU018269/1-998 EKEKAQLMGK HCGSVIPDKP SLNKSNVLLQ GASTQASSVN TSILGSFSKV 351 400 ENSP00000370803/1-1012 DIPIRTGHPT VLESNSDFKV IPTFVTENNV IKSLTGSYAK LPSPEPSMSP ENSBTAP00000005166/1-1006 DISIRTGHTT VLETDSNFQG IPTFVTENNV IKSLTGSYAK IPSPEPSLSP ENSTTRP00000002300/1-1013 DIPIPTGHST VLEPDSDFKH IPTFVTENNV IKSLTGSYAK LPSPEPSLSP bmy_06285T0/1-974 DIPIPTGHST VLEPDSDFKG IPTFVTENNV IKSLTGSYAK LPSPEPSLSP BACU018269/1-998 DVPVPTGHST VLEPDSDFKG IPPFATENNV IKSLTGSYAK LPSPEPSLSP 401 450 ENSP00000370803/1-1012 KMHRRRSRTS SACHILINNP INACELSPKG KEQAMDLIIQ DTDENTNVPE ENSBTAP00000005166/1-1006 KMHRRRSRPS SACHILINNP INASELSPKG KEQAVELVVQ ETDEKTNVPE ENSTTRP00000002300/1-1013 KMHRRCSRPS SACHILINNP INACELSPKG KEQAVDLVVQ ETDEKTNVPE bmy_06285T0/1-974 KMHRRCSRPS SACHILINNP INACELSPKG KEQAVDLVVQ ETDXKTNVPE BACU018269/1-998 KMHRRCSRPS SACHILINNP INACELSPKG KEQAVDLVVQ ETDEKTSVPE 451 500 ENSP00000370803/1-1012 IMPKLPTDLA GVCSSKVYVG KNTSEVKEDV VLGKSNQVCQ SSGNHLENKV ENSBTAP00000005166/1-1006 TVPKLP---- -VCSSKVYVS KNT-EAIQEM VLGKSNQVCQ PSGNQLENKV ENSTTRP00000002300/1-1013 TVPELPIDLA GVCSSKVYVS KNTSEAIQEM VLGKSNQVCQ SSGSQLENKV bmy_06285T0/1-974 TVPELPIDLA GVCSSKVYVS KNTSEAIQEM VLGKSNQVCQ SSGSQLENKV BACU018269/1-998 TVPELPIDLA GVCSSKVYVS KNTSEAIQEM VLGKSNQVCQ SSGSQLENKV 501 550 ENSP00000370803/1-1012 THGLVTVEGQ LTSDERGAHI MNSTCAAMPK LHEPYASSQC IASPNFGTVS ENSBTAP00000005166/1-1006 IHGLAIMEGQ LISDARGPHR VDSTCTAGER LHEPYATREC VLSQNFGSVS ENSTTRP00000002300/1-1013 IHGLAITEGQ LTSDGRGPQK MDSTCTAVER LHEPYATSQC IVSQNFGTVS bmy_06285T0/1-974 IHGLAIMEGQ LTSDGRGPHK MDSTCTAVER LHEPYATSQC IVSQNFGTVS BACU018269/1-998 IHGLAIMEGQ LTSDGRGPHK MDSTCTAVER LHEPYATSQC IVSQNFGTVS 551 600 ENSP00000370803/1-1012 GLKPASMLEK N-CSLQTELN KSYDVKNPSP LLMQNQNTRQ QMDTPMVSCG ENSBTAP00000005166/1-1006 GVKSTNVLEK NSCNLQMELN KSYDVKNPSP LLMQNQNTRQ QMDTPTVSCG ENSTTRP00000002300/1-1013 GLKSANLLEK NSCNFQMGLN KSYDVKNPSP LLMQNQNTRQ HMDTPAVSCG bmy_06285T0/1-974 GLKSANVLEK NSCNFQMGLN KSYDVKNPSP LLMQNQNTRQ HMDTPTASCG BACU018269/1-998 GLKSANVLEK NSCNFQMGLN KSYDVKNPSP LLMQNQNTRQ HMDTPTASCG 601 650 ENSP00000370803/1-1012 NEQFLDNSFE KVKRRLDLDI DGLQKENCPY VITSGITEQE RQHLPEKRYP ENSBTAP00000005166/1-1006 KEQFLDNSFG KVKRRLDLDI DNLQKENYPY VVTTGIAEQE RQHLPEKRYS ENSTTRP00000002300/1-1013 NEQFLDNSFE KVKRRLDLDI DNLQKENWPY VITTGIAEQE RQHLPEKRYS bmy_06285T0/1-974 NEQFLDNSFE KVKRRLDLDI DNLQKENWPY VVTTGIAEQE RQHLPEKRYS BACU018269/1-998 SEQFLDNSFE KVKRRLDLDI DNLQKENWPY VITTGIAEQE RQHLPEKGYS 651 700 ENSP00000370803/1-1012 KGSGFVNKNK MLGTSSKESE ELLKSKMLAF EEMRKRLEEQ HAQQLSLLIA ENSBTAP00000005166/1-1006 KGSVYI-KNK MLESSSKEGE EILKSKILAF EEMRKRLEEQ HAQQLSLLIA ENSTTRP00000002300/1-1013 KGSVYINKNK MLESSSKEGE EILKSKMLAF EEMRKRLEEQ HAQQLSLLIA bmy_06285T0/1-974 KGSVYINKNK ILESSSKEGE EILKSKMLAF EEMRKRLEEQ HAQQLSLLIA BACU018269/1-998 KGSVYINKNK ILESSSKEGE EILKSKMLAF EEMRKRLEEQ HAQQLSLLIA 701 750 ENSP00000370803/1-1012 EQEREQERLQ KEIEEQEKML KEKKAMTAEA SELDINNAVE LEWRKISDSS ENSBTAP00000005166/1-1006 EQEREQERLQ KDIEEQEKML KEKTIITAEA SELDISNAVD FGWRKISDSG ENSTTRP00000002300/1-1013 EQEREQERLQ KEIEEREKML KEKKVITAEA SELDISNAVD LEWRKISDSG bmy_06285T0/1-974 EQEREQERLQ KEIEEREKML KEKKVITAEA SELDISNAVD LEWRKISDSG BACU018269/1-998 EQEREQERLQ KEIEEREKML KEKKVITAEA SELGISNAVD LEWRKISDSG 751 800 ENSP00000370803/1-1012 LLETMLSQAD SLHTSNSNSS GFTNSAMQYS FVSANEAPFY LWGSSTSGLT ENSBTAP00000005166/1-1006 LLDTVLSQVD SLHTSNSNSS GFTSSALQHS FASANEVPFY LWGSSSSGLT ENSTTRP00000002300/1-1013 LLETMLSQVD SLHSSNSNSS GFTSSALQHS FGSASEVPFY LWGSSTSGLT bmy_06285T0/1-974 LLETMLSQVD SLHTSNSNSS GFTSSALQHS FGSANEVPFY LWGSSASGLT BACU018269/1-998 LLETMLSQVD SLHTSNSNSS GFTSSALQHS FGSANEVPFY LWGSSASGLT 801 850 ENSP00000370803/1-1012 KLSVTRPFGR AKTRWSQVFS LEIQAKFNKI TAVAKGFLTR RLMQTDKLKQ ENSBTAP00000005166/1-1006 KLSVTRPFGR AKTKWSQVFS PEVQAKLNKV TAVAKGFLTR RLMQTDKLKQ ENSTTRP00000002300/1-1013 KLSVTRPFGR AKTKWSQVFS AEVQAKFNKV TAVAKGFLTR RLMQTDKLKQ bmy_06285T0/1-974 KLSVTRPFGR AKTKWSQVFS PEVQAKFNKV TAVAKGFLTR RLMQTDKLKQ BACU018269/1-998 KLSVTRPFGR AKTKWSQVFS PEVQAKFNKV TAVAKGFLTR RLMQTDKLKQ 851 900 ENSP00000370803/1-1012 LRQTVKDTME FIRSFQSEAP LKRGIVSAQD ASLQERVLAQ LRAALYGIHD ENSBTAP00000005166/1-1006 LRQTVKDTME FIRSFQSEAP LKRGVVSAQD ASLQERVLAQ LRAALYGIHD ENSTTRP00000002300/1-1013 LRQTVKDTME FIRSFQLEAP LKRGVVSAQD ASLQERVLAQ LRAALYGIHD bmy_06285T0/1-974 LRQTVKDTME FIRSFQLEAP LKRGVVSAQD ASLQERVLAQ ---------- BACU018269/1-998 LRQTVKDTME FIRSFQLEAP LKRGVVSAQD ASLQERVLAQ LRAALYGIHD 901 950 ENSP00000370803/1-1012 IFFVMDAAER MSILHHDREV RKEKMLRQMD KMKSPRVALS AATQKSLDRK ENSBTAP00000005166/1-1006 IFFVMDAAER MSILHHDREV RKEKMLRQMD KMKSPRVALS AATQKSLDRK ENSTTRP00000002300/1-1013 IFFVMDAAER MSILHHDREV RKEKMLRQMD KMKSPRVALS AATQKSLDRK bmy_06285T0/1-974 ---------- ---------- ---------D KMKSPRVALS AATQKSLDRK BACU018269/1-998 IFFVMDAAER MSILHHDREV RKEKMLRQMD KMKSPRVALS AATQKSLDRK 951 1000 ENSP00000370803/1-1012 KYMKAAEMGM PNKKFLVKQN PSETRVLQPN QGQNAPVHRL LSRQGTPKTS ENSBTAP00000005166/1-1006 KYMKAAEMGM PSKKFLVKQN PSETRVLQPN QGQNAPVHRL LSRQGTPKTS ENSTTRP00000002300/1-1013 KYMKAAEMGM PNKKFLVKQN PSETRVLQPN QGQNAPVHRL LSRQGTPKTS bmy_06285T0/1-974 KYMKGAEMGM PNKKFLVKQN PSETRVLQPN QGQNAPVHRL LSRQGTPKTS BACU018269/1-998 KYMRAAEMGM PNKKFLVKQN PSETRVLQPN QGQNAPVHRL LSRQGTPKTS 1001 1050 ENSP00000370803/1-1012 VKGVVQNRQK PSQSRVPNRV PVSGVYAGKI QRKRPNVATI ENSBTAP00000005166/1-1006 VKGVVQNRQK SSQSRVPSRA PVSGVYAGKI QRKRPNVATI ENSTTRP00000002300/1-1013 VKGVVQNRQK SSQSRVPNRA PVSGVYAGKI QRKQPNVATT bmy_06285T0/1-974 VKGVVQNRQK SSQSRVPNRA PVSGV----- ---------- BACU018269/1-998 VKGVVQNRQK SSQSRVPNRA PVSGV----- ----------