KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 16:25:47 2014  Check: 00 ..

 Name: ENSP00000377118/1-373     Len:    373  Check:  4372  Weight:  1.00
 Name: ENSBTAP00000005171/1-373  Len:    373  Check:  5218  Weight:  1.00
 Name: ENSTTRP00000004633/1-373  Len:    373  Check:  6104  Weight:  1.00
 Name: bmy_09403T0/1-373         Len:    373  Check:  3346  Weight:  1.00
 Name: BACU017691/1-373          Len:    373  Check:  3000  Weight:  1.00

//


                          1                                                   50
ENSP00000377118/1-373     MLIPFSMKNC FQLLCNCQVP AAGFKKTVKN GLILQSISND VYQNLAVEDW 
ENSBTAP00000005171/1-373  MLIPFSMKNC FQLLCNLKVP AAGFKNTVKS GLILQSISND VYHNLAVEDW 
ENSTTRP00000004633/1-373  MLIPFSMKNC FQLLCNLKVP AAGFKDTVKS GLILQSVSNN VYQNLAVEDW 
bmy_09403T0/1-373         MLIPFSMKNC FQLLCNRKVP AAGFKDTAKS GLILQSVSND VYQNLAVEDW 
BACU017691/1-373          MLIPFSMKNC FQLLCNLKVP AAGFKDTVKS GLILQSVSND VYQNLAVEDW 


                          51                                                 100
ENSP00000377118/1-373     IHDHMNLEGK PILFFWQNSP SVVIGRHQNP WQECNLNLMR EEGIKLARRR 
ENSBTAP00000005171/1-373  IHDHMNLEGK PVLFLWRNSP TVVIGRHQNP WQECNLNLMR EEGVKLARRR 
ENSTTRP00000004633/1-373  IHDHMNLEAK PVLFFWRNSP SVVIGRHQNP WQECNLNLMR EGGVKLARRR 
bmy_09403T0/1-373         IHDHMNLEAK PVLFFWRNSP SVVIGRHQNP WQECNLNLMR EEGVKLARRR 
BACU017691/1-373          IHDHMNLEAK PVLFFWRNSP SVVIGRHQNP WQECNLNLMR EEGVKLARRR 


                          101                                                150
ENSP00000377118/1-373     SGGGTVYHDM GNINLTFFTT KKKYDRMENL KLIVRALNAV QPQLDVQATK 
ENSBTAP00000005171/1-373  SGGGTVYHDM GNINLTFFTT KKKYDRMENL KLVVRALKAV HPHLDVQATK 
ENSTTRP00000004633/1-373  SGGGTVYHDM GNINLTFFTT KKKYDRMENL KLVVKALKAV QPQLDVRATK 
bmy_09403T0/1-373         SGGGTVYHDM GNINLTFFTT KKKYDRMENL KLVVKALKAV QPQLDVQATK 
BACU017691/1-373          SGGGTVYHDM GNINLTFFTT KKKYDRMENL KLVVKALKAV QPQLDVRATK 


                          151                                                200
ENSP00000377118/1-373     RFDLLLDGQF KISGTASKIG RTTAYHHCTL LCSTDGTFLS SLLKSPYQGI 
ENSBTAP00000005171/1-373  RFDLLLDGQF KISGTASKIG RNAAYHHCTL LCGTDGTFLS SLLKSPYQGI 
ENSTTRP00000004633/1-373  RFDLLLDGQF KISGTASRIG QTAAYHHCTL LCSTDGTFLS SLLKSPYQGV 
bmy_09403T0/1-373         RFDLLLDGQF KISGTASKIG QTAAYHHXTL LCSTDGTFLS SLLKSPYQGI 
BACU017691/1-373          RFDLLLDGQF KISGTASKIG KAAAYHHCTL LCSTDGTFLS SLLKSPYQGI 


                          201                                                250
ENSP00000377118/1-373     RSNATASIPS LVKNLLEKDP TLTCEVLMNA VATEYAAYHQ IDNHIHLINP 
ENSBTAP00000005171/1-373  RSNATASTPA LVKNLMEKDP TLTCEVVINA VATEYATSHQ IDNHIHLINP 
ENSTTRP00000004633/1-373  RSTATASTPA LVKNLMEKDP TLTCEVVINA IATEYATSHQ IDNHIHLINP 
bmy_09403T0/1-373         RSTATASTPA LVKNLMEKDP TLTCEAVINA IATEYATSHQ IDNHIHLINP 
BACU017691/1-373          RTTATASTPA LVKNLMEKDP TLTCEAVINA IATEYATSHQ IDDHIHLINP 


                          251                                                300
ENSP00000377118/1-373     TDETLFPGIN SKAKELQTWE WIYGKTPKFS INTSFHVLYE QSHLEIKVFI 
ENSBTAP00000005171/1-373  TDETVFPGIN SKAIELQTWE WIYGKTPKFS VDTSFTVLHE QSHVEIKVFI 
ENSTTRP00000004633/1-373  TDETLFPGIN SRAKELQTWE WIYGKTPKFS VNTSFNVLYE HSHLEIKVFI 
bmy_09403T0/1-373         TDETLFPGIN SIAKELQTWE WIYGKTPKFS VNTSFNVLYE HSHLEIKVFI 
BACU017691/1-373          TDETLFPGIN SIAKELQTWE WIYGKTPKFS VNTSFNVLYE HSHLEVKVFI 


                          301                                                350
ENSP00000377118/1-373     DIKNGRIEIC NIEAPDHWLP LEIRDKLNSS LIGSKFCPTE TTMLTNILLR 
ENSBTAP00000005171/1-373  DVKNGRIEVC NIEAPDHWLP LEICDQLNSS LIGSKFSPIE TTVLTSILHR 
ENSTTRP00000004633/1-373  DIKNGRIEIC NIEAPDHWLP LEIRDKLNSG FIGSKFCPIE TTMLTSILHR 
bmy_09403T0/1-373         DIKNGRIEIC NIEAPDHWLP LEIRDKLNSG FIGSKFCPIE TTMLTSILRR 
BACU017691/1-373          DIKNGRIEIC NIEAPDHWLP LEIRDKLNSG FIGSKFCPIE TTMLTSVLRR 


                          351                                                400
ENSP00000377118/1-373     TCPQDHKLNS KWNILCEKIK GIM 
ENSBTAP00000005171/1-373  TYPGDDELHS KWNILCEKIK GIM 
ENSTTRP00000004633/1-373  TCPEDDELHS KWNMLCEKIK GIM 
bmy_09403T0/1-373         TCPEDDELHS KWNMVCEKIK GIM 
BACU017691/1-373          TCPEDDELHG KWNMLCEKIK GIM