KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:25:48 2014 Check: 00 .. Name: ENSP00000283629/1-540 Len: 542 Check: 4375 Weight: 1.00 Name: bmy_17629T0/1-445 Len: 542 Check: 7887 Weight: 1.00 Name: BACU014641/1-446 Len: 542 Check: 7544 Weight: 1.00 Name: ENSTTRP00000015919/1-499 Len: 542 Check: 399 Weight: 1.00 Name: ENSBTAP00000005181/1-536 Len: 542 Check: 3364 Weight: 1.00 // 1 50 ENSP00000283629/1-540 --MAWVLKMD EVIESGLVHD FDASLSGIGQ ELGAGAYSMS DVLALPIFKQ bmy_17629T0/1-445 MFFVWIV--- ---------- ---------- ---------- -------FD- BACU014641/1-446 --MAWVLKMD EVIESGLVHD FDASLSGIGQ ELGAGAYSMS DVLALPIFKQ ENSTTRP00000015919/1-499 ---------- ---------- ---------- ---------- DVLALPIFKQ ENSBTAP00000005181/1-536 --MAWVLKMD EVIESGLVHD FDASLSGIGQ ELGAGAYSMS DVLALPIFKQ 51 100 ENSP00000283629/1-540 EDSSLPLDGE TEHPPFQYVM CAATSPAVKL HDETLTYLNQ GQSYEIRMLD bmy_17629T0/1-445 ---------- ---------- ---------- ----IQFLII GQSYEIRMLD BACU014641/1-446 EDSSLPLDDE TKHPPFQYVM CAATSPAVKL HDETLTYLNQ GQSYEIRMLD ENSTTRP00000015919/1-499 EDSSLPLDDE TKHPPFQYVM CAATSPAVKL HDETLTYLNQ GQSYEIRMLD ENSBTAP00000005181/1-536 EDSSLPLDDE TKHPPFQYVM CAATSPAVKL HDETLTYLNQ GQSYEIRMLD 101 150 ENSP00000283629/1-540 NRKMGDMPEI NGKLVKSIIR VVFHDRRLQY TEHQQLEGWK WNRPGDRLLD bmy_17629T0/1-445 NRKMGDVPEI TGKLVKSIIR VVFHDRRLQY TEHQQLEGWK WNRPGDRLLD BACU014641/1-446 NRKMGDVPEI TGKLVKSIIR VVFHDRRLQY TEHQQLEGWK WNRPGDRLLD ENSTTRP00000015919/1-499 NRKMGDVPEI TGKLVKSIIR VVFHDRRLQY TEHQQLEGWK WNRPGDRLLD ENSBTAP00000005181/1-536 NRKMGDVPEI TGKLVKSIIR VVFHDRRLQY TEHQQLEGWK WNRPGDRLLD 151 200 ENSP00000283629/1-540 LDIPMSVGII DTRTNPSQLN AVEFLWDPAK RTSAFIQVHC ISTEFTPRKH bmy_17629T0/1-445 LDIPMSVGII DTKTNPSQLN AVEFLWDPAK RTSAFIQVHC ISTEFTPRKH BACU014641/1-446 LDIPMSVGII DTKTNPSQLN AVEFLWDPAK RTSAFIQVHC ISTEFTPRKH ENSTTRP00000015919/1-499 LDIPMSVGII DTKTNPSQLN AVEFLWDPAK RTSAFIQVHC ISTEFTPRKH ENSBTAP00000005181/1-536 LDIPMSVGII DTRTNPSQLN AVEFLWDPAK RTSAFIQVHC ISTEFTPRKH 201 250 ENSP00000283629/1-540 GGEKGVPFRI QVDTFKQNEN GEYTDHLHSA SCQIKVFKPK GADRKQKTDR bmy_17629T0/1-445 GGEKGVPFRI QVDTFKQNEN GEYTDHLHSA SCQIKVFKPK GADRKQKTDR BACU014641/1-446 GGEKGVPFRI QVDTFKQNEN GEYTDHLHSA SCQIKVFKPK GADRKQKTDR ENSTTRP00000015919/1-499 GGEKGVPFRI QVDTFKQNEN GEYTDHLHSA SCQIKVFKPK GADRKQKTDR ENSBTAP00000005181/1-536 GGEKGVPFRI QVDTFKQNEN GEYTDHLHSA SCQIKVFKPK GADRKQKTDR 251 300 ENSP00000283629/1-540 EKMEKRTAHE KEKYQPSYDT TILTEMRLEP IIEDAVEHEQ KKSSKRTLPA bmy_17629T0/1-445 EKMEKRTAHE KEKYQPSYDT TVLTEMRLEP IIEDAVEHEQ KKSSKRTLPA BACU014641/1-446 EKMEKRTARE KEKYQPSYDT TVLTEMRLEP IIEDAVEHEQ KKSSKRTLPA ENSTTRP00000015919/1-499 EKMEKRTAHE KEKYQPSYDT TVLTEMRLEP IIEDAVEHEQ KKSSKRTLPA ENSBTAP00000005181/1-536 EKMEKRAAHE KEKYQPSYDT TVLTEMRLEP IIEDAVEHEQ KKSSKRTLPA 301 350 ENSP00000283629/1-540 DYGDSLAKRG SCSPWPDAPT AYVNNSPSPA PTFTSPQQST CSVPDSNSSS bmy_17629T0/1-445 DYGDSLAKRG SCSPWPDTPT AYVNSSPSTA PTFTAPQQSA CSVPDSNSSS BACU014641/1-446 DYGDSLAKRG SCSPWPDTPT AYVNSSPSTA PTFTAPQQSA CSIPDSNSSS ENSTTRP00000015919/1-499 DYGDSLAKRG SCSPWPDTPT AYVNSSPSTA PTFTAPQQSA CSVPDSNSSS ENSBTAP00000005181/1-536 DYGDSLAKRG SCSPWPDTPT AYVNNSPSAA PTFTSPPPSA CSVPDSNSSS 351 400 ENSP00000283629/1-540 PNHQGDGASQ TSGEQIQPSA TIQETQQWLL KNRFSSYTRL FSNFSGADLL bmy_17629T0/1-445 PNHQGDGVSQ ASSEQLQPSA TIQETQQWLI KNRFSSYTRL FSSFLGADLL BACU014641/1-446 PNHQGDGVSQ ASSEQLQPSA TIQETQQWLI KNRFSSYTRL FSSFLGADLL ENSTTRP00000015919/1-499 PNHQGDGVSQ ASSEQLQPSA TIQETQQWLL KNRFSSYTRL FSNFLGADLL ENSBTAP00000005181/1-536 PNHQGDGIPQ ASSEQLQPSA TIQETQQWLL KNRFSSYTRL FSNFLGADLL 401 450 ENSP00000283629/1-540 KLTKEDLVQI CGAADGIRLY NSLKSRSVRP RLTIYVCREQ PSSTVLQGQQ bmy_17629T0/1-445 KLTKEDLVQI CGAADGIRLY NSLKSRSVRP RLTLYVCREQ PAP---QGQQ BACU014641/1-446 KLTKEDLVQI CGAADGIRLY NSLKSRC--- ---------G PAS------- ENSTTRP00000015919/1-499 KLTKEDLVQI CGAADGIRLY NSLKSRSVRP RLTLYVCREQ PAP---QGQQ ENSBTAP00000005181/1-536 KLTKEDLVQI CGAADGIRLY NSLKSRSVRP RLTLYVCREQ PAP---QGQQ 451 500 ENSP00000283629/1-540 QAASSASENG SGAPYVYHAI YLEEMIASEV ARKLALVFNI PLHQINQVYR bmy_17629T0/1-445 QAAGGGGDGG GATPYVYHAI YLEEMVASEV ARKLALVFNI PFHQINQVYR BACU014641/1-446 ---------- ---------- ---------- ---------- --------FS ENSTTRP00000015919/1-499 QAAGGGGDSS AATPYVYHAI YLEEMVASEV ARKLALVFNI PFHQINQVYR ENSBTAP00000005181/1-536 PAA-GGGESG SATPFVYHAI YLEEMVASEV ARKLALVFNI PFHQINQVYR 501 550 ENSP00000283629/1-540 QGPTGIHILV SDQMVQNFQD ESCFLFSTVK AESSDGIHII LK bmy_17629T0/1-445 QGPTGIHILV SDQVT----- ---------- ----GMPFPL SH BACU014641/1-446 QSPVAVR--- ---------- ---------- ----GCVRAQ KR ENSTTRP00000015919/1-499 QGPTGIHILV SDQMVQNFQD ESCFLFSTVK AENGGGVHII LK ENSBTAP00000005181/1-536 QGPTGIHILV SDQMVQNFQD ESCFLFSTVK AENGGGVHII LK