KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:25:52 2014 Check: 00 .. Name: ENSP00000217254/1-469 Len: 469 Check: 2848 Weight: 1.00 Name: ENSBTAP00000005194/1-467 Len: 469 Check: 4439 Weight: 1.00 Name: bmy_08915T0/1-469 Len: 469 Check: 3346 Weight: 1.00 Name: ENSTTRP00000009121/1-418 Len: 469 Check: 3937 Weight: 1.00 // 1 50 ENSP00000217254/1-469 MAFLMHLLVC VFGMGSWVTI NGLWVELPLL VMELPEGWYL PSYLTVVIQL ENSBTAP00000005194/1-467 MAFLIHLLVC TFGMGSWVAI NGLWVELPLL VTELPEGWYL PSYLTVIIQL bmy_08915T0/1-469 MAFLIHLLVC TFGMGSWVAI NGLWVELPLL VTELPEGWYL PSYLTVIIQL ENSTTRP00000009121/1-418 ---------- ---------- ---------- ---------- ---------L 51 100 ENSP00000217254/1-469 ANIGPLLVTL LHHFRPSCLS EVPIIFTLLG VGTVTCIIFA FLWNMTSWVL ENSBTAP00000005194/1-467 ANVGPLLVTL LHHFRPGCLS EVAVVFTVLG VGTIACTLFA FLWNVTSWVL bmy_08915T0/1-469 ANIGPLLVTL LHHFQPGCLS EVPIIFTVLG VGTIACTLFA FLWNVTSWVL ENSTTRP00000009121/1-418 ANV-PLLVTL LHHFQPGCLS EVPIVFTVLG VGTI-CTLFA FLWNVTSWVL 101 150 ENSP00000217254/1-469 DGHHSIAFLV LTFFLALVDC TSSVTFLPFM SRLPTYYLTT FFVGEGLSGL ENSBTAP00000005194/1-467 GSRHSIAFLV LTFFLALVDC TSSVTFLPFM SRLPTYYLTT FFVGEGLSGL bmy_08915T0/1-469 GSHHSIAFLV LTFFLALVDC TSSVTFLPFM SRLPTHYLTT FFVGEGLSGL ENSTTRP00000009121/1-418 GSHHSIAFLV LTFFLALVDC TSSVTFLPFM SRLPTHYLTT FFVGEGLSGL 151 200 ENSP00000217254/1-469 LPALVALAQG SGLTTCVNVT EISDSVPSPV PTRETDIAQG VPRALVSALP ENSBTAP00000005194/1-467 LPALVALAQG SGLTTCVNVT EISATTLSPE TTRNMDSPQG ASSTLVSKLA bmy_08915T0/1-469 LPALVALAQG SGLTTCVNIT ETSDTTPIPE TTRNMDSPQG ASSTLVSELA ENSTTRP00000009121/1-418 LPALVALAQG SGLTTCVNIT ETSDTTPIPE TTRSMDSPQG ASSTLVSELA 201 250 ENSP00000217254/1-469 GMEAPLSHLE SRYLPAHFSP LVFFLLLSIM MACCLVAFFV LQRQPRCWEA ENSBTAP00000005194/1-467 GTAPSGIHLE SRYLPANFSP LVFFLLLSFM MACCFISFFF LQRQPKRWEA bmy_08915T0/1-469 RTAPSVVHLE SHYLPANFSP LVFFLLLSFM MACCLIAFFF LQRQPRRWEA ENSTTRP00000009121/1-418 RTAPSVVHLE SHYLPATFSP FVFFLLLSFM MACCLIAFFF LQRLPRRWEA 251 300 ENSP00000217254/1-469 SVEDLLNDQV TLHSIRPREE NDLGPAGTVD SSQGQGYLEE KAAPCCPAHL ENSBTAP00000005194/1-467 SIEDLLTSQV TLNSIRPQEG KDLGPP--EE SGKAQDPPEE KTAPQHLAHL bmy_08915T0/1-469 SIEDLLTSQV TLHSIRPQEG KDLGPPGPED SGKGQEPLEE KTAPRHLAHL ENSTTRP00000009121/1-418 SIEDLLTSQV TLHSIRPQEG KDLGPPGAED SGKGQEPLEE KTAPRHLAHL 301 350 ENSP00000217254/1-469 AFIYTLVAFV NALTNGMLPS VQTYSCLSYG PVAYHLAATL SIVANPLASL ENSBTAP00000005194/1-467 TFIYVLVAFV NALTNGVLPS VQTYSCLSYG PVAYHLSATL SSMASPLTCF bmy_08915T0/1-469 TFIYILVAFV NALTNGVLPS VQTYSCLSYG PVAYHLSATL SSMANPLACF ENSTTRP00000009121/1-418 TFIYILVAFV NALTNGVLPS VQTYSCLSYG PVAYHLSATL SSMANPLACF 351 400 ENSP00000217254/1-469 VSMFLPNRSL LFLGVLSVLG TCFGGYNMAM AVMSPCPLLQ GHWGGEVLIV ENSBTAP00000005194/1-467 LSIFLPNRSL PFLGVLAVLG TSFGAYNMAM AVMSPCPFMQ GHWGGEVLIV bmy_08915T0/1-469 LSMFLPNRSL PFLGVLTALG TGFGAYNMAM AVMSPCPLMQ GHWGGEVLIV ENSTTRP00000009121/1-418 LSMFLPNRSL PFLGVLTVLG TGFGAYNMAM AVMSPCPLMQ GHWGGEVLIV 401 450 ENSP00000217254/1-469 ASWVLFSGCL SYVKVMLGVV LRDLSRSALL WCGAAVQLGS LLGALLMFPL ENSBTAP00000005194/1-467 VSWVLFTGCL SYVKVMLGVI LRDHSRSALL WCGAAVQLGS LLGAVVMFPL bmy_08915T0/1-469 ASWVLFIGCL SYVKVMLGVI LRDRSRSALL WCGAAVQLGS LLGALIMFPL ENSTTRP00000009121/1-418 ASWVLFIGCL SYVKVMLGVI LRDRSRSALL WCGAAVQLGS LLGALIMFPL 451 500 ENSP00000217254/1-469 VNVLRLFSSA DFCNLHCPA ENSBTAP00000005194/1-467 VNVLRLFSSA DFCSLQCSA bmy_08915T0/1-469 VNVLRLFSSA DFCSLQCST ENSTTRP00000009121/1-418 VNVLRLFSSA DFCSLQCST