KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:25:54 2014 Check: 00 .. Name: ENSTTRP00000011660/1-390 Len: 459 Check: 4418 Weight: 1.00 Name: bmy_16678T0/1-377 Len: 459 Check: 8415 Weight: 1.00 Name: ENSP00000263726/1-390 Len: 459 Check: 381 Weight: 1.00 Name: ENSBTAP00000005216/1-390 Len: 459 Check: 9846 Weight: 1.00 Name: BACU012841/1-453 Len: 459 Check: 6996 Weight: 1.00 // 1 50 ENSTTRP00000011660/1-390 ---------- ---------- ---------- ---------- ---------- bmy_16678T0/1-377 ---------- ---------- ---------- ---------- ---------- ENSP00000263726/1-390 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000005216/1-390 ---------- ---------- ---------- ---------- ---------- BACU012841/1-453 MGVLLPSQTL SDFPLEPPAL STRWEQQLQP PVLTMKAESS PDLCLSERTR 51 100 ENSTTRP00000011660/1-390 ---------- ---MMQSAAV PAEGAVKGLP EMLGVPMQQI ------PQCA bmy_16678T0/1-377 ---------- MLYAHGRTQL PRGAGPVGLT IKLKKPGGRG GGGPWTPRSG ENSP00000263726/1-390 ---------- ---MMQSATV PAEGAVKGLP EMLGVPMQQI ------PQCA ENSBTAP00000005216/1-390 ---------- ---MMQSAAV PAEGAVKGLP EMLGVPMQQI ------PQCA BACU012841/1-453 DLRRLRLAGS RSEMMQSAAV PAEGAVKGLP EMLGVPMQQI ------PQCA 101 150 ENSTTRP00000011660/1-390 GCNQHILDKF ILKVLDRHWH SSCLKCADCQ MQLADRCFSR AGSVYCKEDF bmy_16678T0/1-377 GVGEGQLKS- -----ARKPD PASLPRA--- -LILSRCPDR ---------- ENSP00000263726/1-390 GCNQHILDKF ILKVLDRHWH SSCLKCADCQ MQLADRCFSR AGSVYCKEDF ENSBTAP00000005216/1-390 GCNQHILDKF ILKVLDRHWH SSCLKCADCQ MQLADRCFSR AGSVYCKEDF BACU012841/1-453 GCNQHILDKF ILKVLDRHWH SSCLKCADCQ MQLADRCFSR AGSVYCKEDF 151 200 ENSTTRP00000011660/1-390 FXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_16678T0/1-377 --RFGTKCTT CQQGIPPTQV VRKAQDFVYH LHCFACIICN RQLATGDEFY ENSP00000263726/1-390 FKRFGTKCTA CQQGIPPTQV VRKAQDFVYH LHCFACIICN RQLATGDEFY ENSBTAP00000005216/1-390 FKRFGTKCTA CQQGIPPTQV VRKAQDFVYH LHCFACIICN RQLATGDEFY BACU012841/1-453 FKRFGTKCTA CQQGIPPTQV VRKAQDFVYH LHCFACIICN RQLATGDEFY 201 250 ENSTTRP00000011660/1-390 XXXXXXXXXX XXXXXXXXXX DSEAGAKRPR TTITAKQLET LKNAYKNSPK bmy_16678T0/1-377 LMEDGRLVCK EDYETAKQND DSEAGAKRPR TTITAKQLET LKNAYKNSPK ENSP00000263726/1-390 LMEDGRLVCK EDYETAKQND DSEAGAKRPR TTITAKQLET LKNAYKNSPK ENSBTAP00000005216/1-390 LMEDGRLVCK EDYETAKQND DSEAGAKRPR TTITAKQLET LKNAYKNSPK BACU012841/1-453 LMEDGRLVCK EDYETAKQND DSEAGAKRPR TTITAKQLET LKNAYKNSPK 251 300 ENSTTRP00000011660/1-390 PARHVREQLS SETGLDMRVV QVWFQNRRAK EKRLKKDAGR HRWGQFYKSV bmy_16678T0/1-377 PARHVREQLS SETGLDMRVV QVWFQNRRAK EKRLKKDAGR HRWGQFYKSV ENSP00000263726/1-390 PARHVREQLS SETGLDMRVV QVWFQNRRAK EKRLKKDAGR HRWGQFYKSV ENSBTAP00000005216/1-390 PARHVREQLS SETGLDMRVV QVWFQNRRAK EKRLKKDAGR HRWGQFYKSV BACU012841/1-453 PARHVREQLS SETGLDMRVV QVWFQNRRAK EKRLKKDAGR HRWGQFYKSV 301 350 ENSTTRP00000011660/1-390 KRSRGGSKQE KESSAEDCGV SDSELSFRED QILSELGHTN RIYGNVGDVT bmy_16678T0/1-377 KRSRGGSKQE KESSAEDCGV SDSELSFRED QILSELGHTN RIYGNVGDVT ENSP00000263726/1-390 KRSRGSSKQE KESSAEDCGV SDSELSFRED QILSELGHTN RIYGNVGDVT ENSBTAP00000005216/1-390 KRSRGGSKQE KESSAEDCGV SDSELSFRED QILSELGHTN RIYGNVGDVS BACU012841/1-453 KRSRGGSKQE KESSAEDCGV SDSELSFRED QILSELGHTN RIYGNVGDVT 351 400 ENSTTRP00000011660/1-390 GGQLMNGSFS MDGTGQSYQD LRDGSPYGIP QSPSSISSLP SHAPLLNGLD bmy_16678T0/1-377 GGQLMNGSFS MDGTGQSYQD LRDGSPYGIP QSPSSISSLP PHAPLLNGLD ENSP00000263726/1-390 GGQLMNGSFS MDGTGQSYQD LRDGSPYGIP QSPSSISSLP SHAPLLNGLD ENSBTAP00000005216/1-390 GGQLMNGSFS MDGTGQSYQD LRDGSPYGIP QSPSSISSLP SHAPLLNGLD BACU012841/1-453 GGQLMNGSFS MDGTGQSYQD LRDGSPYGIP QSPSSISSLP PHAPLLNGLD 401 450 ENSTTRP00000011660/1-390 YTVDSNLGLI AHAGQGVSQT LRAMAGGPTS DISTGSSVGY PDFPTSPASW bmy_16678T0/1-377 YTVDSNLGII AHAGQGVSQT LRAMAGGPTS DISTGSSVGY PDFPTSPASW ENSP00000263726/1-390 YTVDSNLGII AHAGQGVSQT LRAMAGGPTS DISTGSSVGY PDFPTSPGSW ENSBTAP00000005216/1-390 YTVDSNLGII AHAGQGVSQT LRAMAGGPTS DISTGSSVGY PDFPTSPASW BACU012841/1-453 YTVDSNLGIV AHAGQGVSQT LRAMAGGPTS DISTGSSVGY PDFPTSPASW 451 500 ENSTTRP00000011660/1-390 LDEMDHPPF bmy_16678T0/1-377 LDEMDHPPF ENSP00000263726/1-390 LDEMDHPPF ENSBTAP00000005216/1-390 LDEMDHPPF BACU012841/1-453 LDEMDHPPF