KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:26:02 2014 Check: 00 .. Name: ENSP00000417581/1-388 Len: 388 Check: 9615 Weight: 1.00 Name: BACU009839/1-388 Len: 388 Check: 7985 Weight: 1.00 Name: ENSBTAP00000005228/1-388 Len: 388 Check: 108 Weight: 1.00 Name: bmy_11197T0/1-338 Len: 388 Check: 7850 Weight: 1.00 Name: ENSTTRP00000004343/1-388 Len: 388 Check: 9472 Weight: 1.00 // 1 50 ENSP00000417581/1-388 MSDEASAITS YEKFLTPEEP FPLLGPPRGV GTCPSEEPGC LDISDFGCQL BACU009839/1-388 MSDEASATTS YEKFLTPEEP FPLLGPPRGV GTCPSEEPGC LDISDFGCQL ENSBTAP00000005228/1-388 MSDEASATTS YEKFLTPEEP FPLLGPPRGV GTCPSEEPGC LDISDFGCQL bmy_11197T0/1-338 MSDEASATTS YEKFLTPEEP FPLLGPPRGV GTCPSEEPGC LDISDFGCQL ENSTTRP00000004343/1-388 MSDEASATTS YEKFLTPEEP FPLLGPPRGV GTCPSEEPGC LDISDFGCQL 51 100 ENSP00000417581/1-388 SSCHRTDPLH RFHTNRWNLT SCGTSVASSE GSEELFSSVS VGDQDDCYSL BACU009839/1-388 SSCHRTDPLH RFHTNRWNLT SCGTSVASSE CSEELFSSVS LEDQDDCYSL ENSBTAP00000005228/1-388 SSCHRTDPLH RFHTNRWNLT SCGTSVASSE CSEELFSSVS VGDQDDCYSL bmy_11197T0/1-338 SSCHRTDPLH RFHTNRWNLT SCGTSVASSE CSEELFSSVS VGDQDDCYSL ENSTTRP00000004343/1-388 SSCHRTDPLH RFHTNRWNLT SCGTSVASSE CSEELFSSVS VGDQDDCYSL 101 150 ENSP00000417581/1-388 LDDQDFTSFD LFPEGSVCSD VSSSISTYWD WSDSEFEWQL PGSDIASGSD BACU009839/1-388 LDDQDFTSFD LFPEGSVCSD VSSSISTYWD WSDSEFEWQL PGSDIASGSD ENSBTAP00000005228/1-388 LDDQEFTSFD LFPEGSVCSD VSSSISTYWD WSDSEFEWQL PGSDIASGSD bmy_11197T0/1-338 LDDQDFTSFD LFPEGSVCSD VSSSISTYWD WSDSEFEW-- ---------- ENSTTRP00000004343/1-388 LDDQDFTSFD LFPEGSVCSD VSSSISTYWD WSDSEFEWQL PGSDIASGSD 151 200 ENSP00000417581/1-388 VLSDVIPSIP SSPCLLPKKK NKHRNLDELP WSAMTNDEQV EYIEYLSRKV BACU009839/1-388 VLSDVIPSIP CSPCLLPKKK NKHRNLDELP WSAMTNDEQV EYIEYLSRKV ENSBTAP00000005228/1-388 VLSDVIPSIP SSPCLLPKKK NKHRNLDELP WSAMTNDEQV EYIEYLSRKV bmy_11197T0/1-338 ---------- ---------- ---------- --------QV EYIEYLSRKV ENSTTRP00000004343/1-388 VLSDVIPSIP SSPCLLPKKK NKHLNLDELP WSAMTNDEQV EYIEYLSRKV 201 250 ENSP00000417581/1-388 STEMGLREQL DIIKIIDPSA QISPTDSEFI IELNCLTDEK LKQVRNYIKE BACU009839/1-388 STEMGLREQL DIIKIIDPSA QISPTDSEFI IELNCLTDEK LKQVRNYIKE ENSBTAP00000005228/1-388 STEMGLREQL DIIKIIDPSA QISPTDSEFI IELNCLTDEK LKQVRNYIKE bmy_11197T0/1-338 STEMGLREQL DIIKIIDPSA QISPTDSEFI IELNCLTDEK LKQVRNYIKE ENSTTRP00000004343/1-388 STEMGLREQL DIIKIIDPSA QISPTDSEFI IELNCLTDEK LKQVRNYIKE 251 300 ENSP00000417581/1-388 HSPRQRPARE AWKRSNFSCA STSGVSGASA SASSSSASMV SSASSSGSSV BACU009839/1-388 HSPRLRPARE AWKRSNFSCA STSGVSGASA SASSSSASMV SSASSSGSSV ENSBTAP00000005228/1-388 HSPRLRPTRE AWKRSNFSCA STSGVSGASA SASSSSASMV SSASSSGSSV bmy_11197T0/1-338 HSPRLRPARE AWKRSNFSCA STSGVSGASA SASSSSASMV SSASSSGSSV ENSTTRP00000004343/1-388 HSPRLRPARE AWKRSNFSCA STSGVSGASA SASSSSASMV SSASSSGSSV 301 350 ENSP00000417581/1-388 GNSASNSSAN MSRAHSDSNL SASAAERIRD SKKRSKQRKL QQKAFRKRQL BACU009839/1-388 GNSASNSSAN MSRAHSDSNL SASAAERIRD SKKKSKQRKL QQKALRKRQL ENSBTAP00000005228/1-388 GNSASNSSAN MSRAHSDSNL SASAAERIRD SKKRSKQRKL QQKALRKRQL bmy_11197T0/1-338 GNSASNSSAN MSRAHSDSNL SASAAERIRD SKKRSKQRKL QQKALRKRQL ENSTTRP00000004343/1-388 GNSASNSSAN MSRAHSDSNL SASAAERIRD SKKRSKQRKL QQKALRKRQL 351 400 ENSP00000417581/1-388 KEQRQARKER LSGLFLNEEV LSLKVTEEDH EADVDVLM BACU009839/1-388 KEQRQARKER LSGLFLNEEV LSLKVTEEDH EADVDVLM ENSBTAP00000005228/1-388 KEQRQARKER LSGLFLNEEV LSLKVTEEDH EADVDVLM bmy_11197T0/1-338 KEQRQARKER LSGLFLNEEV LSLKVTEEDH EADVDVLM ENSTTRP00000004343/1-388 KEQRQARKER LSGLFLNEEV LSLKVTEEDH EADVDVLM