KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:26:11 2014 Check: 00 .. Name: bmy_02822T0/1-435 Len: 538 Check: 6018 Weight: 1.00 Name: ENSP00000379845/1-500 Len: 538 Check: 4511 Weight: 1.00 Name: ENSBTAP00000005280/1-500 Len: 538 Check: 7545 Weight: 1.00 Name: BACU012977/1-500 Len: 538 Check: 4902 Weight: 1.00 Name: ENSTTRP00000014053/1-444 Len: 538 Check: 6025 Weight: 1.00 // 1 50 bmy_02822T0/1-435 MASMLLTRRL ACSFQHNYRL LVP------- ---------- ---------- ENSP00000379845/1-500 MASMLLAQRL ACSFQHSYRL LVPGSRHISQ AAAKVDVEFD YDGPLMKTEV ENSBTAP00000005280/1-500 MASMLLTQRL VCSFQHNYRL LVPGSRHISQ AAAKVDVEFD YDGPLMKTEV BACU012977/1-500 MASMLLTRRL ACSFQHNYRL LVPGSRHISQ AAAKVDIEFD YDGPLMKTEV ENSTTRP00000014053/1-444 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_02822T0/1-435 ---------- --------EA VHFFCNYEES RGNYLVDVDG NRMLDLYSQI ENSP00000379845/1-500 PGPRSQELMK QLNIIQNAEA VHFFCNYEES RGNYLVDVDG NRMLDLYSQI ENSBTAP00000005280/1-500 PGPRSRELMK QLNIIQNAEA VHFFCNYEES RGNYLVDVDG NRMLDLYSQI BACU012977/1-500 PGPRSLELMK QLNVIQNAEA VHFFCNYEES RGNYLVDVDG NRMLDLYSQI ENSTTRP00000014053/1-444 ------ELMK QLNVIQNAEA VHFFCNYEES RGNYLVDVDG NRMLDLYSQI 101 150 bmy_02822T0/1-435 SSVPIGSRHI SQAAAKVDIE FDYDGPLMKT EVPGPRSLHR WWAGAGSGGE ENSP00000379845/1-500 SSVPIG---- ---------- --YSHPALLK LIQQPQNA-- ---------- ENSBTAP00000005280/1-500 SSVPIG---- ---------- --YNHPALMK LVQQPQNM-- ---------- BACU012977/1-500 SSVPIG---- ---------- --YNHPALMK LIQQPQNV-- ---------- ENSTTRP00000014053/1-444 SSVPIG---- ---------- --YNHPALMK LIQQPQNV-- ---------- 151 200 bmy_02822T0/1-435 VTAGLLAFLQ STFINRPALG ILPPENFVEK LRESLLSVAP KGMSQLITMA ENSP00000379845/1-500 ---------- SMFVNRPALG ILPPENFVEK LRQSLLSVAP KGMSQLITMA ENSBTAP00000005280/1-500 ---------- STFINRPALG ILPPENFVEK LRESLLSVAP KGMSQLITMA BACU012977/1-500 ---------- STFINRPALG ILPPENFVEK LRESLLSVAP KGMSQLITMA ENSTTRP00000014053/1-444 ---------- STFINRPALG VFPPENFVEK LRESLLSVAP KGMSQLITMA 201 250 bmy_02822T0/1-435 CGSCSNENAF KTIFMWYRSK ERGQSGFSKE ELETCMINQP PRAL---VMS ENSP00000379845/1-500 CGSCSNENAL KTIFMWYRSK ERGQRGFSQE ELETCMINQA PGCPDYSILS ENSBTAP00000005280/1-500 CGSCSNENAF KTIFMWYRSK ERGQSSFSKE ELETCMVNQA PGCPDYSILS BACU012977/1-500 CGSCSNENAF KTIFMWYRSK ERGQSGFSKE ELETCMINQA PGCPDYSILS ENSTTRP00000014053/1-444 CGSCSNENAF KTIFMWYRSK ERGQSGFSKE ELETCMINQA PGCPDYSILS 251 300 bmy_02822T0/1-435 PFGI------ ---------- ---------- ---------- ---------- ENSP00000379845/1-500 FMGAFHGRTM GCLATTHSKA IHKIDIPSFD WPIAPFPRLK YPLEEFVKEN ENSBTAP00000005280/1-500 FMGAFHGRTM GCLATTHSKA IHKIDIPSFD WPIAPFPRLK YPLEEFVKEN BACU012977/1-500 FMGAFHGRTM GCLATTHSKA IHKIDIPSFD WPIAPFPRLK YPLEEFVKEN ENSTTRP00000014053/1-444 FMGAFHGRTM GCLATTHSKA IHKIDIPSFD WPIAPFPRLK YPLEEFVKEN 301 350 bmy_02822T0/1-435 ---------Q VEDLIVKYRK KKKTVAGIIV EPIQSEGGDN HASDDFFRKL ENSP00000379845/1-500 QQEEARCLEE VEDLIVKYRK KKKTVAGIIV EPIQSEGGDN HASDDFFRKL ENSBTAP00000005280/1-500 QQEEARCLEE VEDLIVKYRK KKRTVAGIIV EPIQSEGGDN HASDDFFRKL BACU012977/1-500 QQEEARCLEE VEDLIVKYRK KKKTVAGIIV EPIQSEGGDN HASDDFFRKL ENSTTRP00000014053/1-444 QQEEARCLEE VEDLIVKYRK KKKTVAGIIV EPIQSEGGDN HASDDFFRKL 351 400 bmy_02822T0/1-435 RDISRKHGCA FLVDEVQTGG GCTGKFWAHE HWGLDDPADV MTFSKKMMTG ENSP00000379845/1-500 RDIARKHGCA FLVDEVQTGG GCTGKFWAHE HWGLDDPADV MTFSKKMMTG ENSBTAP00000005280/1-500 RDISRKHGCA FLVDEVQTGG GCTGKFWAHE HWGLDDPADV MTFSKKMMTG BACU012977/1-500 RDISRKHGCA FLVDEVQTGG GCTGKFWAHE HWGLDDPADV MTFSKKMMTG ENSTTRP00000014053/1-444 RDISRKHGCA FLVDEVQTGG GCTGKFWAHE HWGLDDPADV MTFSKKMMTG 401 450 bmy_02822T0/1-435 GFFHKEELRP NAPYRIFNTW LGDPSKNLLL AEVINIIKRE DLLNNAAHAG ENSP00000379845/1-500 GFFHKEEFRP NAPYRIFNTW LGDPSKNLLL AEVINIIKRE DLLNNAAHAG ENSBTAP00000005280/1-500 GFFHKEELRP NAPYRIFNTW LGDPSKNLLL AEVINVIKRE DLLNNAAHAG BACU012977/1-500 GFFHKEELRP NAPYRIFNTW LGDPSKNLLL AEVINIIKRE DLLNNAAHAG ENSTTRP00000014053/1-444 GFFHKEELRP NAPYRIFNTW LGDPSKNLLL AEVINIIKRE DLLNNAAHAG 451 500 bmy_02822T0/1-435 KVLLTGLLGL QARYPQLISR VRGRGTFCSF DTPDESIRNK LISIARNKGL ENSP00000379845/1-500 KALLTGLLDL QARYPQFISR VRGRGTFCSF DTPDDSIRNK LILIARNKGV ENSBTAP00000005280/1-500 KVLLTGLLDL QAQFPQLISR VRGRGTFCSF DTPDESVRNK LISIARNKGL BACU012977/1-500 KVLLTGLLGL QARYPQLISR VRGRGTFCSF DTPDESIRNK LISIARNKGL ENSTTRP00000014053/1-444 KVLLTGLLDL QARYPQLISR VRGRGTFCSF DTPDESIRNK LISIARNKGL 501 550 bmy_02822T0/1-435 MLGGCGDKSI RFRPTLVFRD HHAHLFLNIF SDILADFK ENSP00000379845/1-500 VLGGCGDKSI RFRPTLVFRD HHAHLFLNIF SDILADFK ENSBTAP00000005280/1-500 MLGGCGDKSI RFRPTLVFRD HHAHLFLNIF SDILADFK BACU012977/1-500 MLGGCGDKSI RFRPTLVFRD HHAHLFLNIF SDILADFK ENSTTRP00000014053/1-444 MLGGCGDKSI RFRPTLVFRD HHAHLFLNIF SDILADFK