KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:26:12 2014 Check: 00 .. Name: bmy_16207T0/1-728 Len: 745 Check: 6913 Weight: 1.00 Name: ENSTTRP00000007279/1-702 Len: 745 Check: 5329 Weight: 1.00 Name: ENSP00000252011/1-703 Len: 745 Check: 1198 Weight: 1.00 Name: BACU015496/1-703 Len: 745 Check: 3270 Weight: 1.00 Name: ENSBTAP00000005281/1-703 Len: 745 Check: 534 Weight: 1.00 // 1 50 bmy_16207T0/1-728 ISVA------ ---GTEGPGV SISEERQSLA ENSATTVVYN PYAALSIEQQ ENSTTRP00000007279/1-702 MAASVGPVKF WRPGTEGP-V SISEERQSLA ENFATTVVYN SYAALSIEQQ ENSP00000252011/1-703 MAAPVGPVKF WRPGTEGPGV SISEERQSLA ENSGTTVVYN PYAALSIEQQ BACU015496/1-703 MAAPVGPVKF WRPGTEGPGV SISEERQSLA ENSATTVVYN PYAALSVEQQ ENSBTAP00000005281/1-703 MAAPVGPVKF WRPGTEGPGV SISEERQSLA ENSATTVVYN PYAALSIEQQ 51 100 bmy_16207T0/1-728 RQKLPVFKLR NHILYLIENY QTVVIVGETG CGKSTQIPQY LAEAGWTAEG ENSTTRP00000007279/1-702 RQKLPVFKLR NHILYLIENY QTVVIVGETG CGKSTQIPQY LAEAGWTAEG ENSP00000252011/1-703 RQKLPVFKLR NHILYLIENY QTVVIVGETG CGKSTQIPQY LAEAGWTAEG BACU015496/1-703 RQKLPVFKLR NHILYLIENY QTVVIVGETG CGKSTQIPQY LAEAGWTAEG ENSBTAP00000005281/1-703 RQKLPVFKLR NHILYLIENY QTVVIIGETG CGKSTQIPQY LAEAGWTAEG 101 150 bmy_16207T0/1-728 RVVGVTQPRR VAAVTVAGRV AEERGAVLGH EVGYCIRFDD CTNPLTTRIK ENSTTRP00000007279/1-702 RVVGVTQPRR VAAVTVAGRV AEERGAVLGH EVGYCIRFDD CTNPLATRIK ENSP00000252011/1-703 RVVGVTQPRR VAAVTVAGRV AEERGAVLGH EVGYCIRFDD CTDQLATRIK BACU015496/1-703 RVVGVTQPRR VAAVTVAGRV AEERGAVLGH EVGYCIRFDD CTNPLATRIK ENSBTAP00000005281/1-703 RVVGVTQPRR VAAVTVAGRV AEERGAVLGH EVGYCIRFDD CTNPLATRIK 151 200 bmy_16207T0/1-728 FLTDGMLVRE MMVDPLLTKY SFW------- SSAFSPLSAS LMASPGSFAG ENSTTRP00000007279/1-702 FLTDGMLVRE MMVDPLLTKY SAIMLDEAHE RTLYTDIAIG LLKKIQKKRG ENSP00000252011/1-703 FLTDGMLVRE MMVDPLLTKY SVIMLDEAHE RTLYTDIAIG LLKKIQKKRG BACU015496/1-703 FLTDGMLVRE MMVDPLLTKY SAIMLDEAHE RTLYTDIAIG LLKKIQKKRG ENSBTAP00000005281/1-703 FLTDGMLVRE MMVDPLLTKY SAIMLDEAHE RTLYTDIAIG LLKKIQKKRG 201 250 bmy_16207T0/1-728 YSSFSRLSVF IAPGSADAST FGLLTELLRS SLGCRQRKFW DFFNQNDTSD ENSTTRP00000007279/1-702 -----DLRLI VASATLDAE- ---------- -------KFW DFFNQNDTSD ENSP00000252011/1-703 -----DLRLI VASATLDAD- ---------- -------KFR DFFNQNETSD BACU015496/1-703 -----DLRLI VASATLDAE- ---------- -------KFW DFFNQNDTSD ENSBTAP00000005281/1-703 -----DLRLI VASATLDAE- ---------- -------KFR DFFNHNDTSD 251 300 bmy_16207T0/1-728 PARDTCVILT VEGRTFPVDI FYLQSPVPDY IKSTVETVMK IHQTEGDGDI ENSTTRP00000007279/1-702 PTRDTCVILT VEGRTFPVDI FYLQSPVPDY IKSTVETVMK IHQTEGDGDI ENSP00000252011/1-703 PARDTCVILT VEGRTFPVDI FYLQSPVPDY IKSTVETVVK IHQTEGDGDV BACU015496/1-703 PARDTCVILT VEGRTFPVDI FYLQSPVPDY IKSTVETVMK IHQTEGDGDI ENSBTAP00000005281/1-703 PTRDTCVILT VEGRTFPVDI FYLQSPVPDY IKSTVETVMK IHQTEGDGDI 301 350 bmy_16207T0/1-728 LAFLTGQEEV ETVVSMLIEQ ARALGRTGMK RHLRVLPMYA GLPSFEQMKV ENSTTRP00000007279/1-702 LAFLTGQEEV ETVVSMLIEQ ARALGRTGMK RHLRVLPMYA GLPSFEQMKV ENSP00000252011/1-703 LAFLTGQEEV ETVVSMLIEQ ARALARTGMK RHLRVLPMYA GLPSFEQMKV BACU015496/1-703 LAFLTGQEEV ETVVSMLIEQ ARALGRTGMK RHLRVLPMYA GLPSFEQMKV ENSBTAP00000005281/1-703 LAFLTGQEEV ETVVSMLIEQ ARALGQTGMK RHLRILPMYA GLPSFEQMKV 351 400 bmy_16207T0/1-728 FERVSRTVRK VIVATNVAET SITISGIVYV IDCGFVKLRA YNPRTAIECL ENSTTRP00000007279/1-702 FERVSRTVRK VIVATNVAET SITISGIVYV IDCGFVKLRA YNPRTAIECL ENSP00000252011/1-703 FERVSRSVRK VIVATNVAET SITISGIVYV IDCGFVKLRA YNPRTAIECL BACU015496/1-703 FERVSRTVRK VIVATNVAET SITISGIVYV IDCGFVKLRA YNPRTAIECL ENSBTAP00000005281/1-703 FERVSRSVRK VIVATNVAET SITISGIVYV IDCGFVKLRA YNPRTAIECL 401 450 bmy_16207T0/1-728 VVVPVSQASA SQRAGRGGRS RSGKCYRLYT EEAFDQLPQS TVPEMQRSNL ENSTTRP00000007279/1-702 VVVPVSQASA SQRAGRGGRS RSGKCYRLYT EEAFDQLPQS TVPEMQRSNL ENSP00000252011/1-703 VVVPVSQASA NQRAGRGGRS RSGKCYRLYT EEAFDKLPQS TVPEMQRSNL BACU015496/1-703 VVVPVSQASA SQRAGRGGRS RSGKCYRLYT EEAFDQLPQS TVPEMQRSNL ENSBTAP00000005281/1-703 VVVPVSQASA NQRAGRGGRS RSGKCYRLYT EEAFDQLPQS TVPEMQRSNL 451 500 bmy_16207T0/1-728 APVILQLKAL GIDNVLRFHF MSPPPAQSMV QALELLYALG GLDKDCRLTE ENSTTRP00000007279/1-702 APVILQLKAL GIDNVLRFHF MSPPPAQSMV QALELLYALG GLDKDCRLTE ENSP00000252011/1-703 APVILQLKAL GIDNVLRFHF MSPPPAQSMV QALELLYALG GLDKDCRLTE BACU015496/1-703 APVILQLKAL GIDNVLRFHF MSPPPAQSMV QALELLYALG GLDKDCRLTE ENSBTAP00000005281/1-703 APVILQLKAL GIDNVLRFHF MSPPPAQSMV QALELLYALG GLDKDCRLTE 501 550 bmy_16207T0/1-728 PLGMRIAEFP LNPMFAKMLL ESGNFSCSQE ILSIAAMMQI QNVFVVPSNQ ENSTTRP00000007279/1-702 PLGMRIAEFP LNPMFAKMLL ESGNFGCSQE ILSIAAMMQI QNVFVVPSNQ ENSP00000252011/1-703 PLGMRIAEFP LNPMFAKMLL ESGNFGCSQE ILSIAAMMQI QNIFVVPPNQ BACU015496/1-703 PLGMRIAEFP LNPMFAKMLL ESGNFGCSQE ILSIAAMMQI QNVFVVPSNQ ENSBTAP00000005281/1-703 PLGMRIAEFP LNPMFAKMLL ESGNFGCSQE ILSIAAMMQI QNVFVVPSNQ 551 600 bmy_16207T0/1-728 KSQAIRVHRK FAVEEGDHLT MLNVYEAFIK HNKNSQWCQE HFLNYKGLVR ENSTTRP00000007279/1-702 KSQAIRVHRK FAVEEGDHLT MLNVYEAFIK XXXXXXXXXX XXXXXXXXXX ENSP00000252011/1-703 KSHAIRVHRK FAVEEGDHLT MLNIYEAFIK HNKDSKWCQE HFLNYKGLVR BACU015496/1-703 KSQAIRVHRK FAVEEGDHLT MLNVYEAFIK HNKNSQWCQE HFLNYKGLVR ENSBTAP00000005281/1-703 KSQAIRAHRK FAVEEGDHLT MLNVYEAFIK HNKNSQWCQE HFLNYKGLVR 601 650 bmy_16207T0/1-728 AVTVREQLKK LLVKFQVPKK SSEGDPDPVL RCIVSGFFAN AARFHSTGAY ENSTTRP00000007279/1-702 XXXXXXXXXX XXXXXXXXXX XXXXDPDPVL RCIVSGFFAN AARFHSTGAY ENSP00000252011/1-703 AATVREQLKK LLVKFQVPRK SSEGDPDLVL RCIVSGFFAN AARFHSTGAY BACU015496/1-703 AVTVREQLKK LLVKFQVPKK SSEGDPDPVL RCIVSGFFAN AARFHSTGAY ENSBTAP00000005281/1-703 AATVREQLKK LLVKFQVPKK SSEGDPDPVL RCIVSGFFAN AARFHSTGAY 651 700 bmy_16207T0/1-728 RCIESDSGGG IIKGTREDGE NSFVCVKYNL HAFLMTLNAS VGR-VIYNEV ENSTTRP00000007279/1-702 RTIRDDH--- ---------- ------ELHI HPASVLYAEK PPRWVIYNEV ENSP00000252011/1-703 RTIRDDH--- ---------- ------ELHI HPASVLYAEK PPRWVIYNEV BACU015496/1-703 RTIRDDH--- ---------- ------ELHI HPASVLYAEK PPRWVIYNEV ENSBTAP00000005281/1-703 RTIRDDH--- ---------- ------ELHI HPASVLYAEK PPRWVIYNEV 701 750 bmy_16207T0/1-728 IQTSKYYMRD VTAIESAWLL ELAPHFYQQG THLSLKAKRA KVQDQ ENSTTRP00000007279/1-702 IQTSKYYMRD VTAIESAWLL ELAPHFYQQG THLSLKAKRA KVQDQ ENSP00000252011/1-703 IQTSKYYMRD VTAIESAWLL ELAPHFYQQG THLSLKAKRA KVQDP BACU015496/1-703 IQTSKYYMRD VTAIESAWLL ELAPHFYQQG THLSLKAKRA KVQDQ ENSBTAP00000005281/1-703 IQTSKYYMRD VTAIESAWLL ELAPHFYQQG THLSLRAKRA KVQDQ