KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:26:12 2014 Check: 00 .. Name: ENSBTAP00000005289/1-546 Len: 632 Check: 6641 Weight: 1.00 Name: ENSTTRP00000007181/1-516 Len: 632 Check: 2518 Weight: 1.00 Name: BACU017272/1-583 Len: 632 Check: 1083 Weight: 1.00 Name: bmy_16761T0/1-598 Len: 632 Check: 614 Weight: 1.00 Name: ENSP00000227451/1-619 Len: 632 Check: 4005 Weight: 1.00 // 1 50 ENSBTAP00000005289/1-546 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007181/1-516 ---------- ---------- ---------- ---------- ---------- BACU017272/1-583 MGNQEDARVW VGRDQD---- --CEATQRGE EAVARVCRRP VGQKCGQSVL bmy_16761T0/1-598 MLLASAVVVW EWLNEHGRWR PYSPAVSHHI EAVVRAGPRA GGSVVLGQVD ENSP00000227451/1-619 MLLASAVVVW EWLNEHGRWR PYSPAVSHHI EAVVRAGPRA GGSVVLGQVD 51 100 ENSBTAP00000005289/1-546 ---------- ---------- GTLRPVRRNY YDPASAPGKG VVWEWENDHG ENSTTRP00000007181/1-516 ---------- ---------- ---------- ---------- ---------- BACU017272/1-583 GFEETTEVVG GEHLGLDLQG RTLRPVRRNY YDPTSAPGKG VVWEWENDNG bmy_16761T0/1-598 SRLAPYIIDL QSMNQFRQDT GTLRPVRRNY YDPTSAPGKG VVWEWENDNG ENSP00000227451/1-619 SRLAPYIIDL QSMNQFRQDT GTLRPVRRNY YDPSSAPGKG VVWEWENDNG 101 150 ENSBTAP00000005289/1-546 SWTPYDMDVG ITIQHAFEKQ RPWIDLSPIG FGYVIDFGTM GQINRQTQRQ ENSTTRP00000007181/1-516 ------MEVG ITIQHAYEKQ HPWIDLTSIG FSYVIDFSTM GQINRQTQRQ BACU017272/1-583 SWTPYDMEVG ITIQHAYEKQ HPWIDLTSIG FSYVIDFSTM GQINRQTQRQ bmy_16761T0/1-598 SWTPYDMEVG ITIQHAYEKQ HPWIDLTSIG FSYVIDFSTM GQINRQTQRQ ENSP00000227451/1-619 SWTPYDMEVG ITIQHAYEKQ HPWIDLTSIG FSYVIDFNTM GQINRQTQRQ 151 200 ENSBTAP00000005289/1-546 RRVRRRETL- -PLTSAGAFP MTSSGPAGKS ------GRGT VPAQCRWSCL ENSTTRP00000007181/1-516 RRVRRRLDLI YPMVT-GTLP KPQSWPASPG LRAPPAAPAL PQCSCPQCVL BACU017272/1-583 RRVRRRLDLI YPM------- ---------- ---------- -------CVL bmy_16761T0/1-598 RRVRRRLDLI YPMVT-GTLP KAQSWPASPG ---PAAAPPA PPCSCPQCVL ENSP00000227451/1-619 RRVRRRLDLI YPMVT-GTLP KAQSWPVSPG ---PATSPPM SPCSCPQCVL 201 250 ENSBTAP00000005289/1-546 HAGERQPPGA SRRSSWCLPP WERAAHVEGA LPSPTPPSPP PCHSSLTKQE ENSTTRP00000007181/1-516 VMSVKAAVAN GSAGPLQPPA ARKHMPESGM VKMPPPPGP- --GAKPLDST BACU017272/1-583 VMSVKAAVAN GSAGPLQPPA ARKNMPESGA VKVPPPPGP- --GTKPLDST bmy_16761T0/1-598 VMSVKAAVAN GSAGPLQPPA ARKNMPESGV VKVPPPPGP- --GAKPLDST ENSP00000227451/1-619 VMSVKAAVVN GSTGPLQLPV TRKNMPPPGV VKLPPLPGS- --GAKPLDST 251 300 ENSBTAP00000005289/1-546 KAFSGAASSY PWETRILSGG LKGGEGGRQV QGWAVPAPPQ WASREQALPH ENSTTRP00000007181/1-516 GTIRGPVKMV P--SQAIRRQ ASSTPAGANA VSPASPPGAN GKTGRVALAT BACU017272/1-583 GTIRGPVKTV P--SQAIRRQ ASSTPAGANA GSPASPPGAN GKTGRVALAT bmy_16761T0/1-598 GTIRGPVKTV P--SQAIRRP AASTPAGANA GSPASPPGAN GKTGRVALAT ENSP00000227451/1-619 GTIRGPLKTA P--SQVIRRQ ASSMPTGTTM GSPASPPGPN SKTGRVALAT 301 350 ENSBTAP00000005289/1-546 L----LERLE GNQTRCGKPP TVPTVPVKNL SGSSPVNPAL AGITGILMSA ENSTTRP00000007181/1-516 LNRTNLQRLA IAQSRVLIAS GVPTVPVKNL SGSSPVNPAL AGITGILMSA BACU017272/1-583 LNRTNLQRLA IAQSRVLIAS GVPTVPVKNL SGSSPVNPAL AGITGILMSA bmy_16761T0/1-598 LNRTNLQRLA IAQSR---GP HRPSEEPKWV QSCQP----- ---------- ENSP00000227451/1-619 LNRTNLQRLA IAQSRVLIAS GVPTVPVKNL NGSSPVNPAL AGITGILMSA 351 400 ENSBTAP00000005289/1-546 AGLPVCLTRP ---PKLVLHP PPVSKSEIKS IPGVSNTSRK TTKKQAK-KG ENSTTRP00000007181/1-516 AGLPVCLTRP ---PKLALHP PPVSKSEIKS IPGVSNTSRK TTKKQAK-KG BACU017272/1-583 AGLPVCLTRP ---PKLVLHP PPVSKSEIKS IPGVSNTSRK TTKKQAK-KG bmy_16761T0/1-598 -----CLGRD HWDPHECGRA ARVSHQATKA --GSPPTPRQ QERNKIHPRG ENSP00000227451/1-619 AGLPVCLTRP ---PKLVLHP PPVSKSEIKS IPGVSNTSRK TTKKQAK-KG 401 450 ENSBTAP00000005289/1-546 KTPEEVLKKY LQKVRHPPDE DCTICMERLT APSGYKGPQP TVKPDLVGKL ENSTTRP00000007181/1-516 KTPEEVLKKY LQKVRHPPDE DCTICMERLT APSGYKGPQP TVKPDLVGKL BACU017272/1-583 KTPEEVLKKY LQKVRHPPDE DCTICMERLT APSGYKGPQP TVKPDLVGKL bmy_16761T0/1-598 KTPEEVLKKY LQKVRHPPDE DCTICMERLT APSGYKGPQP TVKPDLVGKL ENSP00000227451/1-619 KTPEEVLKKY LQKVRHPPDE DCTICMERLT APSGYKGPQP TVKPDLVGKL 451 500 ENSBTAP00000005289/1-546 SRCGHVYHVY CLVAMYNNGN KDGSLQCPTC KTIYGVKTGT QPPGKMEYHV ENSTTRP00000007181/1-516 SRCGHIYHIY CLVAMYNNGN KXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU017272/1-583 SRCGHIYHIY CLVAMYNNGN KDGSLQCPTC KTIYGVKTGT QPPGKMEYHL bmy_16761T0/1-598 SRCGHIYHIY CLVAMYNNGN KDGSLQCPTC KTIYGVKTGT QPPGKMEYHL ENSP00000227451/1-619 SRCGHVYHIY CLVAMYNNGN KDGSLQCPTC KTIYGVKTGT QPPGKMEYHL 501 550 ENSBTAP00000005289/1-546 IPHSLPGHPD CRTIRIIYSI PPGIQGPEHP NPGKSFSARG FPRHCYLPDS ENSTTRP00000007181/1-516 XXXXXXXXXX XXXXXXXXXX XXXXXGPEHP NPGKSFSARG FPRHCYLPDS BACU017272/1-583 IPHSLPGHPD CKTIRIIYSI PPGIQGPEHP NPGKSFSARG FPRHCYLPDS bmy_16761T0/1-598 IPHSLPGHPD CKTIRIIYSI PPGIQGPEHP NPGKSFSARG FPRHCYLPDS ENSP00000227451/1-619 IPHSLPGHPD CKTIRIIYSI PPGIQGPEHP NPGKSFSARG FPRHCYLPDS 551 600 ENSBTAP00000005289/1-546 EKGRKVLKLL LVAWDRRLIF AIGTSSTTGE SDTVIWNEVH HKTEFGSNLT ENSTTRP00000007181/1-516 EKGRKVLKLL LVAWDRRLIF AIGTSSTTGE SDTVIWNEVH HKTEFGSNLT BACU017272/1-583 EKGRKVLKLL LVAWDRRLIF AIGTSSTTGE SDTVIWNEVH HKTEFGSNLT bmy_16761T0/1-598 EKGRKVLKLL LVAWDRRLIF AIGTSSTTGE SDTVIWNEVH HKTEFGSNLT ENSP00000227451/1-619 EKGRKVLKLL LVAWDRRLIF AIGTSSTTGE SDTVIWNEVH HKTEFGSNLT 601 650 ENSBTAP00000005289/1-546 GHGYPDANYL DNVLAELAAQ GISEDSAAQE KD ENSTTRP00000007181/1-516 GHGYPDANYL DNVLAELAAQ GISEDSTAQE KD BACU017272/1-583 GHGYPDAHYL DNVLAELAAQ GISEDSAAQE KD bmy_16761T0/1-598 GHGYPDANYL DNVLAELAAQ GISEDSAAQE KD ENSP00000227451/1-619 GHGYPDANYL DNVLAELAAQ GISEDSTAQE KD