KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 16:26:12 2014  Check: 00 ..

 Name: bmy_20163T0/1-264         Len:    280  Check:  1286  Weight:  1.00
 Name: ENSTTRP00000002217/1-133  Len:    280  Check:  7055  Weight:  1.00
 Name: ENSP00000411898/1-154     Len:    280  Check:  6725  Weight:  1.00
 Name: ENSBTAP00000005295/1-132  Len:    280  Check:  3530  Weight:  1.00

//


                          1                                                   50
bmy_20163T0/1-264         MVKEGAAVID VGINYVHDPM TGKTKLVGDV DFEVPCLPFG SSFGALCAAL 
ENSTTRP00000002217/1-133  ---------- ---------- ---------- ---------- MAFGVSISVY 
ENSP00000411898/1-154     ---------- ---------- ---------- ---------- MALGVPISVY 
ENSBTAP00000005295/1-132  ---------- ---------- ---------- ---------- MDFGVPISVY 


                          51                                                 100
bmy_20163T0/1-264         LGTLLWTVWE GSGAKCPPAA GLASQVTALN IIKSFPSKSH SLEIAEGLPD 
ENSTTRP00000002217/1-133  I--------- ---------- ---------- ---------- ---------- 
ENSP00000411898/1-154     L--------- ---------- ---------- ---------- ---------- 
ENSBTAP00000005295/1-132  L--------- ---------- ---------- ---------- ---------- 


                          101                                                150
bmy_20163T0/1-264         ERIEDVKIGD FPIESKDAHL LKMPSPPTPF HTAVTALTEE AARTVAPPIT 
ENSTTRP00000002217/1-133  ---------- ---------- ---------L FNAVTALTEE AARTVTPPIT 
ENSP00000411898/1-154     ---------- ---------- ---------L FNAMTALTEE AAVTVTPPIT 
ENSBTAP00000005295/1-132  ---------- ---------- ---------L INAMTALTGE AASTISPPIT 


                          151                                                200
bmy_20163T0/1-264         TQQSNWTVNK TEAGYTEGPI ALRLSHPCLE DHHSYCINGV CAFHHELEKA 
ENSTTRP00000002217/1-133  TQQTGYT--- ------EGPI ALRVSHPCLE DHHSYCINGV CAFHDELEKA 
ENSP00000411898/1-154     AQQGNWTVNK TEADNIEGPI ALKFSHLCLE DHNSYCINGA CAFHHELEKA 
ENSBTAP00000005295/1-132  TQQTDYT--- ------EGPI ALKFSHPCLE DHHSYCINGV CAFHHELEKA 


                          201                                                250
bmy_20163T0/1-264         ICRCFTGYTG ERCEHLTLTS YAVDSYEKYI AIGIGVSEIE ITLQRLF--- 
ENSTTRP00000002217/1-133  ICRCFAGYTG ERCEHLTLTS YAVDPYEKYI AIGIGVGLLL SGFLVIFYCY 
ENSP00000411898/1-154     ICRCFTGYTG ERCEHLTLTS YAVDSYEKYI AIGIGVGLLL SGFLVIFYCY 
ENSBTAP00000005295/1-132  ICRCFTGYTG ERCEHLTLTS YAADSYEKYI AIGIGVGLLL SGFLVIFYCY 


                          251                                                300
bmy_20163T0/1-264         -RRKT----- -------TMR PLEEIFVSHW 
ENSTTRP00000002217/1-133  IKKRY----- -------EKN KL-------- 
ENSP00000411898/1-154     IRKRCLKLKS PYNVCSGERR PL-------- 
ENSBTAP00000005295/1-132  IRKR------ -------EKK KL--------