KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:26:13 2014 Check: 00 .. Name: ENSTTRP00000005400/1-742 Len: 876 Check: 1328 Weight: 1.00 Name: ENSBTAP00000005300/1-739 Len: 876 Check: 6827 Weight: 1.00 Name: BACU007705/1-738 Len: 876 Check: 3053 Weight: 1.00 Name: bmy_13120T0/1-736 Len: 876 Check: 3230 Weight: 1.00 // 1 50 ENSTTRP00000005400/1-742 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000005300/1-739 ---------- ---------- ---------- ---------- ---------- BACU007705/1-738 MHRKRRLSGA FLAPSRLHRP HWRRERPGRR DTPEPRASQT APTHTPDTCR bmy_13120T0/1-736 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000005400/1-742 ---------- ---------- --PVTTQGSQ QTQPPQKHYG ITSPISLAAP ENSBTAP00000005300/1-739 ---------- --------MP F-PVTTQGSQ QTQPPQKHYG ITSPISLAAP BACU007705/1-738 GSWTQLGRKP PERKPKHELP FPPVTTQGSQ QTQPPQKHYG ITSPISLAAP bmy_13120T0/1-736 ---------- ---------- --PVTTQGSQ QTQPPQKHYG ITSPISLAAP 101 150 ENSTTRP00000005400/1-742 KETDCLLTQK LIETLKPFGV FEEEEELQRR ILILGKLNNL VKEWIREISE ENSBTAP00000005300/1-739 KETDCLLTQK LVETLKPFGV FEEEEELQRR ILILGKLNNL VKEWIREISE BACU007705/1-738 KETDCLLTQK LIETLKPFGV FEEEEELQRR ILILGKLNNL VKEWIREISE bmy_13120T0/1-736 KETDCLLTQK LIETLKPFGV FEEEEELQRR ILILGKLNNL VKEWIREISE 151 200 ENSTTRP00000005400/1-742 IKNLPQSVIE NVGGKIFTFG SYRLGVHTKG ADIDALCVAP RHVDRSDFFT ENSBTAP00000005300/1-739 SKNLPQSVIE NVGGKIFTFG SYRLGVHTKG ADIDALCVAP RHVDRSDFFT BACU007705/1-738 IKNLPQSVIE NVGGKIFTFG SYRLGVHTKG ADIDALCVAP RHVDRSDFFT bmy_13120T0/1-736 IKNLPQSVIE NVGGKIFTFG SYRLGVHTKG ADIDALCVAP RHVDRSDFFT 201 250 ENSTTRP00000005400/1-742 SFYDKLKLQE EVKDLRAVEE AFVPVIKLCF DGIEIDILFA RLALQTIPED ENSBTAP00000005300/1-739 SFYDKLKLQE EVKDLRAVEE AFVPVIKLCF DGIEIDILFA RLALQTIPED BACU007705/1-738 SFYDKLKLQE EVKDLRAVEE AFVPVIKLCF DGIEIDILFA RLALQTIPED bmy_13120T0/1-736 SFYDKLKLQE EVKDLRAVEE AFVPVIKLCF DGIEIDILFA RLALQTIPED 251 300 ENSTTRP00000005400/1-742 LDLRDDSLLK NLDIRCIRSL NGCRVTDEIL HLVPNIDNFR LTLRAIKLWA ENSBTAP00000005300/1-739 LDLRDDSLLK NLDIRCIRSL NGCRVTDEIL HLVPNIDNFR LTLRAIKLWA BACU007705/1-738 LDLRDDSLLK NLDIRCIRSL NGCRVTDEIL HLVPNIDNFR LTLRAIKLWA bmy_13120T0/1-736 LDLRDDSLLK NLDIRCIRSL NGCRVTDEIL HLVPNIDNFR LTLRAIKLWA 301 350 ENSTTRP00000005400/1-742 KXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXKWEW ENSBTAP00000005300/1-739 KRHNIYSNIL GFLGGVSWAM LVARTCQLYP NAIASTLVHK FFLVFSKWEW BACU007705/1-738 KR-------- ---------- ---------- ---------- ---------- bmy_13120T0/1-736 KRHNIYSNIL GFLGGVSWAM LVARTCQLYP NAIASTLVHK FFLVFSKWEW 351 400 ENSTTRP00000005400/1-742 PNPVLLKQPE ECNLNLPVWD PRVNPSDRYH LMPIITPAYP QQNSTYNVSV ENSBTAP00000005300/1-739 PNPVLLKQPE ECNLNLPVWD PRVNPSDRYH LMPIITPAYP QQNSTYNVSV BACU007705/1-738 ---------- ---------- ---------- ---------- ---------- bmy_13120T0/1-736 PNPVLLKQPE ECNLNLPVWD PRVNPSDRYH LMPIITPAYP QQNSTYNVSV 401 450 ENSTTRP00000005400/1-742 STRMVMVEEF KQGLAITDEI LLSKAEWSKL FEAPNFFQKY KHYIVLLASA ENSBTAP00000005300/1-739 STRMVMVEEF KQGLAITDEI LLSKAEWSKL FEAPNFFQKY KHYIVLLASA BACU007705/1-738 ---------- ---LAITDEI LLSKAEWSKL FEAPNFFQKY KHYIVLLASA bmy_13120T0/1-736 STRMVMVEEF KQGLAITDEI LLSKAEWSKL FEAPNFFQKY KHYIVLLASA 451 500 ENSTTRP00000005400/1-742 PTEKQRLEWV GLVESKIRIL VGSLEKNEFI TLAHVNPQSF PAPKENPDKE ENSBTAP00000005300/1-739 PTEKQRLEWV GLVESKIRIL VGSLEKNEFI TLAHVNPQSF PAPKENPDKE BACU007705/1-738 PTEKQRLEWV GLVESKIRIL VGSLEKNEFI TLAHVNPQSF PAPKENPDKE bmy_13120T0/1-736 PTEKQRLEWV GLVESKIRIL VGSLEKNEFI TLAHVNPQSF PAPKENPDKE 501 550 ENSTTRP00000005400/1-742 EFRTMWVIGL VFKKTENSEN LSVDLTYDIQ SFTDTVYRQA INSKMFEVDM ENSBTAP00000005300/1-739 EFRTMWVIGL VFKKTENSEN LSVDLTYDIQ SFTDTVYRQA INSKMFEVDM BACU007705/1-738 EFRTMWVIGL VFKKTENSEN LSVDLTYDIQ SFTDTVYRQA INSKMFEVDM bmy_13120T0/1-736 EFRTMWVIGL VFKKTENSEN LSVDLTYDIQ SFTDTVYRQA INSKMFEVDM 551 600 ENSTTRP00000005400/1-742 KIAAMHVRRK QLHQLLPNHV LQKKKKHSTE GVRLTPLNXX XXXXXXXXXX ENSBTAP00000005300/1-739 KIAAMHVKRK QLHQLLPSHV LQKKKKHSTE GVKLTPLN-- ----DSSLDL BACU007705/1-738 KIAAMHVRRK QLHQLLPNHV LQKKKKHSTE GVRLTPLN-- ----DSSLDL bmy_13120T0/1-736 KIAAMHVRRK QLHQLLPNHV LQKKKKHSTE GVRLTPLN-- ----DSSLDL 601 650 ENSTTRP00000005400/1-742 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000005300/1-739 SMDSDNSMSV PSPTSAMKTS PLNSSGSSQG RNSPAPAVTA ASVTNIQATE BACU007705/1-738 SMDSDNSMSV PSPTGAAKTS PLHSSGSSQG RNSPAPAVTA ASVTNIQATE bmy_13120T0/1-736 SMDSDNSMSV PSPTGAAKTS PLHSSGGSQG RNSPAPAVTA ASVTNIQATE 651 700 ENSTTRP00000005400/1-742 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000005300/1-739 VSLPQINSSE SSGGTSSESI PQTATQPAIS SPPKPTVSRV VSSTRLVNPP BACU007705/1-738 VSVPQVNSSE SSGGTSSESI PQTATQPAIS SPPKPTVSRV VSSTRLVNPP bmy_13120T0/1-736 VSVPQVNSSE SSGGTSSESI PQTATQPAIS SPPKPTVSRV VSSTRLVNPP 701 750 ENSTTRP00000005400/1-742 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXDET SEDANCLALS ENSBTAP00000005300/1-739 PRPSGNAAAK IPNPIVGVKR TSSPHKEESP KKTKTEEDET SEDANCLALS BACU007705/1-738 PRPSGNAATK TPNPIVGVKR TSSPHKEESP KKTKTEE--- ---------- bmy_13120T0/1-736 PRPSGNAATK TPNPIVGVKR TSSPHKEESP KKTKTEEDET SEDANCLALS 751 800 ENSTTRP00000005400/1-742 GHDKTETKEQ LDTETSTTQS ETIQTAASLL ASQKTSSTDL SDIPALPANP ENSBTAP00000005300/1-739 GHDKTETKEQ LDTETSTTQS ETIQTATSLL ASQKTSSTDL SDIPALPANP BACU007705/1-738 --------EQ LDTETSTTQS ETIQTAASLL ASQKTSSTDL SDIPALPANP bmy_13120T0/1-736 GHDKTETKEQ LDTETSTTQS ETIQTAASLL ASQKTSSTDL SDIPALPANP 801 850 ENSTTRP00000005400/1-742 IPVIKNSIKL RLNR------ ---------- ---------- ---------- ENSBTAP00000005300/1-739 IPVIKNSIKL RLNR------ ---------- ---------- ---------- BACU007705/1-738 IPVIKNSIKL RLNRGAVNKE IDDKVVERRQ LGRTAPHLCG VGADWPLHRK bmy_13120T0/1-736 IPVIKNSIKL RLNR------ ---------- ---------- ---------- 851 900 ENSTTRP00000005400/1-742 ---------- ---------- ------ ENSBTAP00000005300/1-739 ---------- ---------- ------ BACU007705/1-738 TFLCLSAKRN AVRSFRGHRA CLPAPG bmy_13120T0/1-736 ---------- ---------- ------