KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:26:14 2014 Check: 00 .. Name: ENSP00000333203/1-406 Len: 443 Check: 8355 Weight: 1.00 Name: ENSBTAP00000005307/1-404 Len: 443 Check: 1827 Weight: 1.00 Name: bmy_17961T0/1-439 Len: 443 Check: 7512 Weight: 1.00 Name: BACU007729/1-404 Len: 443 Check: 3357 Weight: 1.00 Name: ENSTTRP00000015410/1-258 Len: 443 Check: 788 Weight: 1.00 // 1 50 ENSP00000333203/1-406 ---------- ---------- ---------- -----MQLFL LLCLVLLSPQ ENSBTAP00000005307/1-404 ---------- ---------- ---------- -----MRLCL FLCLVLLGPR bmy_17961T0/1-439 MLAPVQPALC SLPSPTDRRL CCVHARPLDR NRAATMRLRL LLCLALLSPR BACU007729/1-404 ---------- ---------- ---------- -----MRLRL LLCLALLSPR ENSTTRP00000015410/1-258 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000333203/1-406 GASLHRHHPR EMKKRVEDLH VGATVAPSSR RDFTFDLYRA LASAAPSQSI ENSBTAP00000005307/1-404 MATLRRSQ-- --KKKIQEVP PAVTTAPPGS RDFVFDLYRA LAAAAPAQNI bmy_17961T0/1-439 MATLRHPQ-- --KKRVPELP PAVATVAPGS RDFVFDLYRA LAAAAPDQNI BACU007729/1-404 MATLRRPQ-- --KKRVPELP PAVATAAPGS RDFVFDLYRA LAAAVPDQNI ENSTTRP00000015410/1-258 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000333203/1-406 FFSPVSISMS LAMLSLGAGS STKMQILEGL GLNLQKSSEK ELHRGFQQLL ENSBTAP00000005307/1-404 FFSPLSITVS LAMLSLGAQS NTKAQILEGL GIGPGEGSEE ELHSASQRLL bmy_17961T0/1-439 FFSPLSISVS LAMLSLGARA NTKAQVLAGL GLNTQEGQEE ELHSASQRLL BACU007729/1-404 FFSPLSISVS LAMLSLGARA NTKAQVLEGL GPNPQEGQEE ELHSASQRLL ENSTTRP00000015410/1-258 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000333203/1-406 QELNQPRDGF QLSLGNALFT DLVVDLQDTF VSAMKTLYLA DTFPTNFRDS ENSBTAP00000005307/1-404 RELQQPQDSL QLSLGNALFT KPRLPIQEAF LGAMRTLYLA DTFPTNFEDP bmy_17961T0/1-439 RELEQPGDSL QLSLGNALFT KPTVPIEEAF LGAVRTLYLA DTFPTDFEDP BACU007729/1-404 RELEQPGDSL QLSLGNALFT KPTVPIEEAF LGAMRTLYLA DTFPTDFEDP ENSTTRP00000015410/1-258 ---------- ---------- ---------- --AIRTLYLA DTFPTDLR-R 201 250 ENSP00000333203/1-406 AGAMKQINDY VAKQTKGKIV DLLKNLDSNA VVIMVNYIFF KAKWETSFNH ENSBTAP00000005307/1-404 EGAKKKINDY VAKQTKGKIV DLIKSLDGTQ VMVMVNYIFF KAKWETSFNL bmy_17961T0/1-439 EGAQKQINDY VAKQTKGKIV DLVKRLDGTE VMVIVNYIFF KAKWETSFNR BACU007729/1-404 EGAQKQINDY VAKQTKGKIV DLVKGLDGTE VMVIVNYIFF KAKWETSFNR ENSTTRP00000015410/1-258 EGAQKQINDY VAKQTKGKIV DLVKGLDGTE VMVIVNYIFF KXXXXXXXXX 251 300 ENSP00000333203/1-406 KGTQEQDFYV TSETVVRVPM MSREDQYHYL LDRNLSCRVV GVPYQGNATA ENSBTAP00000005307/1-404 KSTHEQDFYV TPETVVRVPM MKQQDQFYYL LDRNLSCKVV GVPYQGNATA bmy_17961T0/1-439 KSTHEQDFHV TSETVVRVPM MKREDQFYYL LDRNLSCRVV GVPYQGNATA BACU007729/1-404 KSTQEQDFHV TSETVVRVPM MKREDQFYYL LDRNLSCRVV GVPYQGNATA ENSTTRP00000015410/1-258 XXXXXXXXXX XXXXVVRVPM MKREDQFYYL LDRNL-CRVV GVPYQGNATA 301 350 ENSP00000333203/1-406 LFILPSEGKM QQVENGLSEK TLRKWLKMFK KRQLELYLPK FSIEGSYQLE ENSBTAP00000005307/1-404 FFILPREGEM EQVENGLKEK TLKKWLRMPM KRRLELYLPK FSIEGSYQLE bmy_17961T0/1-439 FFILPREGGM GQVENGLKEK TLRKWLKIPM KRQLELYLPK FSIEGSYQLE BACU007729/1-404 FFILPREGGM GQVENGLKEK TLRKWLKMSM KRQLELYLPK FSIEGSYQLE ENSTTRP00000015410/1-258 -FILPREGGM GQVENGLTEK TLRKWLKMPM KRQLELHLPK FSIEGSYQLE 351 400 ENSP00000333203/1-406 KVLPSLGISN VFTSHADLSG ISNHSNIQVS EMVHKAVVEV DESGTRAAAA ENSBTAP00000005307/1-404 EVLPKLGIRD IFTSDADLTG ISNHSSIRVS EMVHKAVVEV DESGTQAAAA bmy_17961T0/1-439 KVLPKLGIRD VFTSHADLTG ISNHSNIQVS EMVHKAVVEV DESGTQAAAA BACU007729/1-404 KVLPKLGIRD VFTSHADLTG ISNHSSIQVS EMVHKAVVEV DESGTQAAAA ENSTTRP00000015410/1-258 KVLPKLGIRD VFTSYADLTG ISNHSNIQVS EMVHKAMVEV DESGTQAAAA 401 450 ENSP00000333203/1-406 TGTIFTFRSA RLNSQRLVFN RPFLMFIVDN N--ILFLGKV NRP ENSBTAP00000005307/1-404 TGMVITFKSA RLGSQRIVFN RPFLVLIVKN SKHILFLGKV TRP bmy_17961T0/1-439 TGTIFMFRSA RMSSQRIVFN RPFLMLIVEN SKHILFLGKV TRP BACU007729/1-404 TGTIFMFRSA RMSSQRIVFN RPFLMLIVEN SKHILFLGKV TRP ENSTTRP00000015410/1-258 TGTIFMFRSA RMSSQKVVFN RPFLMLIVEN NKHILFLGKV TRP