KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:26:14 2014 Check: 00 .. Name: ENSTTRP00000012354/1-308 Len: 369 Check: 417 Weight: 1.00 Name: ENSP00000446828/1-308 Len: 369 Check: 9386 Weight: 1.00 Name: ENSBTAP00000005311/1-308 Len: 369 Check: 889 Weight: 1.00 Name: bmy_17006T0/1-323 Len: 369 Check: 8166 Weight: 1.00 Name: BACU004033/1-352 Len: 369 Check: 3061 Weight: 1.00 // 1 50 ENSTTRP00000012354/1-308 ---------- ---------- ---------- ---------- ----MASSHT ENSP00000446828/1-308 ---------- ---------- ---------- ---------- ----MASSNT ENSBTAP00000005311/1-308 ---------- ---------- ---------- ---------- ----MASSPT bmy_17006T0/1-323 ---------- ---------- ---------- ---------- ----MASSHT BACU004033/1-352 MPQNVPSAER KNTIEFIGRA KAEMESFSKS LLVNVYQRIY TGYIMASSHT 51 100 ENSTTRP00000012354/1-308 VLMRLVASAY SIAQKAGTIV RRVIAEGDLG IVEKTCATDL QTKADRLVQM ENSP00000446828/1-308 VLMRLVASAY SIAQKAGMIV RRVIAEGDLG IVEKTCATDL QTKADRLAQM ENSBTAP00000005311/1-308 VLMRLVASAY SIAQKAGTIV RRVIAEGDLG IIEKTCATDL QTKADRLVQV bmy_17006T0/1-323 VLMRLVASAY SIAQKAGTIV RHVIAEGDLG IVEKTCATDL QTKADRLVQM BACU004033/1-352 VLMRLVASAY SIAQKAGTIV RHVIAEGDLG IVEKTCATDL QTKADRLVQM 101 150 ENSTTRP00000012354/1-308 SICSSLARKF PKLTIIGEED LPPEDVDQEL IEDGQWEEIL KQPCPSQYSA ENSP00000446828/1-308 SICSSLARKF PKLTIIGEED LPSEEVDQEL IEDSQWEEIL KQPCPSQYSA ENSBTAP00000005311/1-308 SICSSLARKF PKLTIIGEED LPPEDVDQEL IEDGQWEEIL KQPCPSQYSA bmy_17006T0/1-323 SICSSLARKF PKLTIIGEED LPPEDVDQEL IEDGQWEEIL KQPCPSQYSA BACU004033/1-352 SICSSLARKF PKLTIIGEED LPPEDVDQEL IEDGQWEEIL KQPCPSQYTA 151 200 ENSTTRP00000012354/1-308 IKEEDLVVWV DPLDGTKEYT EGLLDNVTVL IGIAYEGKAI AGVINQPYYN ENSP00000446828/1-308 IKEEDLVVWV DPLDGTKEYT EGLLDNVTVL IGIAYEGKAI AGVINQPYYN ENSBTAP00000005311/1-308 IKEEDLVVWV DPLDGTKEYT EGLLDNVTVL IGIAYEGKAI AGVINQPYYN bmy_17006T0/1-323 IKEEDLVVWV DPLDGTKEYT EGLLDNVTVL IGIAYEGKAI AGVINQPYYN BACU004033/1-352 IKEEDLVVWV DPLDGTKEYT EGLLDNVTVL IGIAYEGKAI AGVINQPYYN 201 250 ENSTTRP00000012354/1-308 YQA------- --------GP DAVLGRTIWG VLGLGAFGFQ L-EVPAGKHI ENSP00000446828/1-308 YEA------- --------GP DAVLGRTIWG VLGLGAFGFQ LKEVPAGKHI ENSBTAP00000005311/1-308 YQA------- --------GP DAVLGRTIWG VLGLGAFGFQ LKEAPAGKHI bmy_17006T0/1-323 YQNNENQKLR EPRNEAKAGP DAVLGRTIWG VLGLGAFGFQ LKEVPAGKHI BACU004033/1-352 YQA------- --------GP DAVLGRTIWG VLGLGAFGFQ LKEVPAGKHI 251 300 ENSTTRP00000012354/1-308 ITTTRSHNSQ LVTDCVAAMN PDDVLRVGGA GNKIIQLIEG KASAYVFASP ENSP00000446828/1-308 ITTTRSHSNK LVTDCVAAMN PDAVLRVGGA GNKIIQLIEG KASAYVFASP ENSBTAP00000005311/1-308 ITTTRSHNSQ LVTDCITAMN PDDVLRVGGA GNKIIQLIEG KASAYVFASP bmy_17006T0/1-323 ITTTRSHNSQ LVTDCVAAMN PDDVLRVGGA GNKIIQLIEG KASAYVFASP BACU004033/1-352 ITTTRSHNSQ LVTDCVAAMN PDDVLRVGGA GNKIIQLIEG KASAYVFASP 301 350 ENSTTRP00000012354/1-308 GCKKWDTCAP EVILHAVGGK LTDIHGNAVQ YNKELLP-KS HSCLSNVKRF ENSP00000446828/1-308 GCKKWDTCAP EVILHAVGGK LTDIHGNVLQ YHKDVKHMNS AGVLATLRNY ENSBTAP00000005311/1-308 GCKKWDTCAP EVILHAVGGK LTDIHGNALQ YNKEVKHMNS AGVLATLRNY bmy_17006T0/1-323 GCKKWDTCAP EVILHAVGGK LTDIHGNALQ YNKEVKHMNS AGVLATLRNY BACU004033/1-352 GCKKWDTCAP EVILHAVGGK LTDIHGNALQ YNKEVKHMNS AGVLATLRNY 351 400 ENSTTRP00000012354/1-308 PTPILNTNII LYVDETDFE ENSP00000446828/1-308 --DYYASRVP ESIKNALVP ENSBTAP00000005311/1-308 --DYYASRVP QSVKNALVP bmy_17006T0/1-323 --DYYASRVP ESVKNVLVP BACU004033/1-352 --DYYASRVP ESVKNVLVP