KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:26:18 2014 Check: 00 .. Name: ENSTTRP00000013821/1-391 Len: 408 Check: 1634 Weight: 1.00 Name: bmy_02830T0/1-305 Len: 408 Check: 4103 Weight: 1.00 Name: BACU018451/1-375 Len: 408 Check: 6854 Weight: 1.00 Name: ENSBTAP00000005331/1-380 Len: 408 Check: 2414 Weight: 1.00 Name: ENSP00000358089/1-392 Len: 408 Check: 4617 Weight: 1.00 // 1 50 ENSTTRP00000013821/1-391 MMEDDGQPRT LXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXQPDSRRV bmy_02830T0/1-305 MMEDDGQPRT LYVGNLSRDV TEVLILQLFS QIGPCKSCKM ITE------- BACU018451/1-375 ---------- -YVGNLSRDV TEVLILQLFS QIGPCKSCKM ITE------- ENSBTAP00000005331/1-380 MMEDDGQPRT LYVGNLSRDV TEVLILQLFS QIGPCKSCKM ITE------- ENSP00000358089/1-392 MMEDDGQPRT LYVGNLSRDV TEVLILQLFS QIGPCKSCKM ITEQPDSRRV 51 100 ENSTTRP00000013821/1-391 NSSVGFSVLQ HTSNDPYCFV EFYEHRDAAA ALAAMNGRKI LGKEVKVNWA bmy_02830T0/1-305 ---------- HTSNDPYCFV EFYEHRDAAA ALAAMNGRKI LGKEVKVNWA BACU018451/1-375 ---------- HTSNDPYCFV EFYEHRDAAA ALAAMNGRKI LGKEVKVNWA ENSBTAP00000005331/1-380 ---------- HTSNDPYCFV EFYEHRDAAA ALAAMNGRKI LGKEVKVNWA ENSP00000358089/1-392 NSSVGFSVLQ HTSNDPYCFV EFYEHRDAAA ALAAMNGRKI LGKEVKVNWA 101 150 ENSTTRP00000013821/1-391 TTPSSQKKDT S--------- --NHFHVFVG DLSPEITTED IKSAFAPFGK bmy_02830T0/1-305 TTPSSQKKDT S--------- --NHFHVFVG DLSPEITTED IKSAFAPFGK BACU018451/1-375 TTPSSQKKDT SSKYSCCILL WKNHFHVFVG DLSPEITTED IKSAFAPFGK ENSBTAP00000005331/1-380 TTPSSQKKDT S--------- --NHFHVFVG DLSPEITTED IKSAFAPFGK ENSP00000358089/1-392 TTPSSQKKDT S--------- --NHFHVFVG DLSPEITTED IKSAFAPFGK 151 200 ENSTTRP00000013821/1-391 ISDARVVKDM ATGKSKGYGF VSFYNKLDAE NAIVHMGGQW LGGRQIRTNW bmy_02830T0/1-305 ISDARVVKDM ATGKSKGYGF VSFYNKLDAE NAIVHMGGQW LGGRQIRTNW BACU018451/1-375 ISDARVVKDM ATGKSKGYGF VSFYNKLDAE NAIVHMGGQW LGGRQIRTNW ENSBTAP00000005331/1-380 ISDARVVKDM ATGKSKGYGF VSFYNKLDAE NAIVHMGGQW LGGRQIRTNW ENSP00000358089/1-392 ISDARVVKDM ATGKSKGYGF VSFYNKLDAE NAIVHMGGQW LGGRQIRTNW 201 250 ENSTTRP00000013821/1-391 ATRKPPAPKS TQEN-TKQLR FEDVVNQSSP KNCTVYCGGI ASGLTDQLMR bmy_02830T0/1-305 ATRKPPAPKS TQEN------ ---------- ---------- ------QLMR BACU018451/1-375 ATRKPPAPKS TQENNTKQLR FEDVVNQSSP KNCTVYCGGI ASGLTDQLMR ENSBTAP00000005331/1-380 ATRKPPAPKS TQENNTKQLR FEDVVNQSSP KNCTVYCGGI ASGLTDQLMR ENSP00000358089/1-392 ATRKPPAPKS TQENNTKQLR FEDVVNQSSP KNCTVYCGGI ASGLTDQLMR 251 300 ENSTTRP00000013821/1-391 QTFSPFGQIM EIRVFPEKGY SFVRFSTHES AAHAIVSVNG TTIEGHVVKC bmy_02830T0/1-305 QTFSPFGQIM EIRVFPEKGY SFVRFSTHES AAHAIVSVNG TTIEGHVVKC BACU018451/1-375 QTFSPFGQIM EIRVFPEKGY SFVRFSTHES AAHAIVSVNG TTIEGHVVKC ENSBTAP00000005331/1-380 QTFSPFGQIM EIRVFPEKGY SFVRFSTHES AAHAIVSVNG TTIEGHVVKC ENSP00000358089/1-392 QTFSPFGQIM EIRVFPEKGY SFVRFSTHES AAHAIVSVNG TTIEGHVVKC 301 350 ENSTTRP00000013821/1-391 YWGKESPDMT KNFQQ----- VDYSQWGQWS QVYGNPQQYG QYMANGWQVP bmy_02830T0/1-305 YWGKESPDMT KNFQQ----- VDYSQWGQWS QVYGNPQQYG QYMANGWQVP BACU018451/1-375 YWGKESPDMT KNFQQ----- VDYSQWGQWS QVYGNPQQYG QYMANGWQVP ENSBTAP00000005331/1-380 YWGKESPDMT KNFQQVIRFF VDYSQWGQWS QVYGNPQQYG QYMANGWQVP ENSP00000358089/1-392 YWGKESPDMT KNFQQ----- VDYSQWGQWS QVYGNPQQYG QYMANGWQVP 351 400 ENSTTRP00000013821/1-391 PYGVYGQPWN QQGFGVDQSP SAAWMGGFGA QPPQGQAPPP VIPPPNQAGY bmy_02830T0/1-305 PYGVYGQPWN QQGFGVEXXV ---------- ---------- ---------- BACU018451/1-375 PYGVYGQPWN QQGFGVDQSP SAAWMGGFGA QPPQGQAPPP VIPPPNQAGY ENSBTAP00000005331/1-380 PYGVYGQPWN QQGFGVDQSP SAAWMGGFGA QPPQGQAPPP VIPPPNQAGY ENSP00000358089/1-392 PYGVYGQPWN QQGFGVDQSP SAAWMGGFGA QPPQGQAPPP VIPPPNQAGY 401 450 ENSTTRP00000013821/1-391 GMASYQTQ bmy_02830T0/1-305 -------- BACU018451/1-375 GMASYQTQ ENSBTAP00000005331/1-380 GMASYQTQ ENSP00000358089/1-392 GMASYQTQ