KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:26:20 2014 Check: 00 .. Name: ENSBTAP00000005344/1-813 Len: 822 Check: 4116 Weight: 1.00 Name: ENSP00000361219/1-822 Len: 822 Check: 1966 Weight: 1.00 Name: ENSTTRP00000013367/1-697 Len: 822 Check: 6278 Weight: 1.00 Name: bmy_05374T0/1-817 Len: 822 Check: 7871 Weight: 1.00 Name: BACU016190/1-587 Len: 822 Check: 1709 Weight: 1.00 // 1 50 ENSBTAP00000005344/1-813 -MNTALTRVG PAAERPAPPE EVEG---SET GGKEPAADAA PGPSTAFRLL ENSP00000361219/1-822 MNTADQARVG PADDGPAPSG EEEGEGGGEA GGKEPAADAA PGPSAAFRLM ENSTTRP00000013367/1-697 ---------- ---------- ---------- ---------- ---------- bmy_05374T0/1-817 -MNTAKARVG PAVDRPAPPE EKEG----DA GGREPGADAA PGPSAAFRLL BACU016190/1-587 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000005344/1-813 VTRREPAVRL QYAVSGQETL AWSEDHRVSV STARSIAVLE LICDVHNPGQ ENSP00000361219/1-822 VTRREPAVKL QYAVSGLEPL AWSEDHRVSV STARSIAVLE LICDVHNPGQ ENSTTRP00000013367/1-697 ---------- ---------- ---------- ---------- ---------- bmy_05374T0/1-817 VTRREPAVKL QYAVSGLEPL VWSDDHRVSV STARSIAVLE LICDVHNPGQ BACU016190/1-587 ---------- ---------- ---------- ---------- ---------- 101 150 ENSBTAP00000005344/1-813 DLVIHRTSVP APLHSCFLKV GSKREVAECK QRFATSEDPT VSQTFMLDRV ENSP00000361219/1-822 DLVIHRTSVP APLNSCLLKV GSKTEVAECK EKFAASKDPT VSQTFMLDRV ENSTTRP00000013367/1-697 ---------- ---------V GSKTEVAECK EKFAASEDPT VSQTFMLDRV bmy_05374T0/1-817 DLVIHRTSVP APLNSCFLKV GSKTEVAECK EKFATSEDPT VSQTFMLDRV BACU016190/1-587 ---------- ---------- ---------- ---------- -----MLDRV 151 200 ENSBTAP00000005344/1-813 FNPEGKALPP LRGFKYTSWS PVGCDANGRC LLAALTMDNR LTIQANLNRL ENSP00000361219/1-822 FNPEGKALPP MRGFKYTSWS PMGCDANGRC LLAALTMDNR LTIQANLNRL ENSTTRP00000013367/1-697 FNPEGKALPP LRGFKYTSWS PMGCDANGRC LLAALTMDNR LTIQANLNRL bmy_05374T0/1-817 FNPEGKALPP LRGFKYTSWS PMGCDANGRC LLAALTMDNR LTIQANLNRL BACU016190/1-587 FNPEGKALPP LRGFKYTSWS PMGCDANGRC LLAALTMDNR LTIQANLNRL 201 250 ENSBTAP00000005344/1-813 QWVQLVDLTE IYGERLYETS YRFSRNEAPE GSLRDFAEFQ RRHSMQAPVR ENSP00000361219/1-822 QWVQLVDLTE IYGERLYETS YRLSKNEAPE GNLGDFAEFQ RRHSMQTPVR ENSTTRP00000013367/1-697 QWVQLVDLTE IYGERLYETS YRFSKSEAPE GNLRDFAEFQ RRHSMQTPVR bmy_05374T0/1-817 QWVQLVDLTE IYGERLYETS YRFSKSEAPE GNLRDFAEFQ RRHSMQTPVR BACU016190/1-587 QWVQLVDLTE IYGERLYETS YRFSKSEAPE GNLRDFAEFQ RRHSMQTPVR 251 300 ENSBTAP00000005344/1-813 MEWSGICTTQ QVKHNNECRD VGSVLLAVLF ENGNIAVWQF QLPFAGKESI ENSP00000361219/1-822 MEWSGICTTQ QVKHNNECRD VGSVLLAVLF ENGNIAVWQF QLPFVGKESI ENSTTRP00000013367/1-697 MEWSGICTTQ QVKHNNECRD VGSVLLAVLF ENGNIAVWQF QLPFVGKESI bmy_05374T0/1-817 MEWSGICTTQ QVKHNNECRD VGSVLLAVLF ENGNIAVWQF QLPFVGKESI BACU016190/1-587 MEWSGICTTQ QVKHNNECRD VGSVLLAVLF ENGNIAVWQF QLPFVGKESI 301 350 ENSBTAP00000005344/1-813 SSCNTIESGI SSPSVLFWWE YEHNNRKMSG LIVGSAFGPV KILPVNLKAV ENSP00000361219/1-822 SSCNTIESGI TSPSVLFWWE YEHNNRKMSG LIVGSAFGPI KILPVNLKAV ENSTTRP00000013367/1-697 SSCNTIESGI NSPSVLFWWE YEHNNRKMSG LIVGSAFGPV KILPVNLKAV bmy_05374T0/1-817 SSCNTIESGI NSPSVLFWWE YEHNNRKMSG LIVGSAFGPV KILPVNLKAV BACU016190/1-587 SSCNTIESGI NSPSVLFWWE YEHNNRKMSG LIVGSAFGPV KILPVNLKAV 351 400 ENSBTAP00000005344/1-813 KGYFTLRQPV VLWKEMDQLP VHSIKCVPLY HPYQKCSCSL VVAARGSYVF ENSP00000361219/1-822 KGYFTLRQPV ILWKEMDQLP VHSIKCVPLY HPYQKCSCSL VVAARGSYVF ENSTTRP00000013367/1-697 KGYFTLRQPV VLCKE-DQLP VHSI-CVPLY -PYQKCSS-- LVVARGPYVF bmy_05374T0/1-817 KGYFTLRQPV VLWKEMDQLP VQSIKCVPLY HPYQKCSCSL VVAARGPYVF BACU016190/1-587 KGYFTLRQPV VLWKEMDQLP VQSIKCVPLY HPYQKCSCSL VVAARGPYVF 401 450 ENSBTAP00000005344/1-813 WCLLLISKAG LNVHNSHVTG LHSLPIVSMT ADKQNGTVYT CSSDGKVRQL ENSP00000361219/1-822 WCLLLISKAG LNVHNSHVTG LHSLPIVSMT ADKQNGTVYT CSSDGKVRQL ENSTTRP00000013367/1-697 WC-LLISKAG LNVHYSHVTG LHSLPIVSMT ADKQNGTVYT CSSDGKVRQL bmy_05374T0/1-817 WCLLLISKAG LNVHNSHVTG LHSLPIVSMT ADKQNGTVYT CSSDGKVRQL BACU016190/1-587 WCLLLISKAG LNVHNSHVTG LHSLPIVSMT ADKQNGTVYT CSSDGKVRQL 451 500 ENSBTAP00000005344/1-813 IPIFTDVALK FEHQLIKLSD VFGSVRTHGI AVSPCGAYLA VITTEGMVNG ENSP00000361219/1-822 IPIFTDVALK FEHQLIKLSD VFGSVRTHGI AVSPCGAYLA IITTEGMING ENSTTRP00000013367/1-697 VPIFTDVALK FEHHLIKLSD VFGSVRTHGI AVSPCGAYLA VITTEGMVNG bmy_05374T0/1-817 IPIFTDVALK FEHQLIKLSD VFGSVRTHGI AVSPFGAYLA VITTEGMVNG BACU016190/1-587 IPIFTDVALK FEHQLIKLSD VFGSVRTHGI AVSPFGAYLA VITTEGMVNG 501 550 ENSBTAP00000005344/1-813 LHPVNKNYQV QFVTLKTFEE AAAQLLESSV QNLFKQVDLI DLVRWKILKD ENSP00000361219/1-822 LHPVNKNYQV QFVTLKTFEE AAAQLLESSV QNLFKQVDLI DLVRWKILKD ENSTTRP00000013367/1-697 LHPVNKNYQV QFVTLKAFEE AAAKLLQSSI QNLFKQVDLI DLVRWKILKD bmy_05374T0/1-817 LHPVNKNYQV QFXTLKSFEE AAAQLLESSV QNLFKQVDLI DLVRWKILKD BACU016190/1-587 LHPVNKNYQV QFVTLKSFEE AAAQLLESSV QNLFKQVDLI DLVRWKILKD 551 600 ENSBTAP00000005344/1-813 KHIPQFLHEA LEKKIESSGA TYYWRFKLFL LRILYQSMQK TPSEALCKPT ENSP00000361219/1-822 KHIPQFLQEA LEKKIESSGV TYFWRFKLFL LRILYQSMQK TPSEALWKPT ENSTTRP00000013367/1-697 KRIPQFLQEA LEKKIESSGA TYYWRFKLFL LRILYQSMQK TASEALCRPI bmy_05374T0/1-817 KHIPQFLQEA LEKKIESSGA TYFWRFKLFL LRILYQSMQK TASEALCRPI BACU016190/1-587 KHIPQFLQEA LEKKIESSGA TYYWRFKLFL LRILYQSMQK TASEALCRPI 601 650 ENSBTAP00000005344/1-813 HEDSKILLVD SPGMGNAEDE QQEEGTSSKQ ISKQ-----S KDGDPEDPTE ENSP00000361219/1-822 HEDSKILLVD SPGMGNADDE QQEEGTSSKQ VVKQGLQERS KEGDVEEPTD ENSTTRP00000013367/1-697 LEDSKILLVD SPGTGNAEGE QQEEGAASEQ TNKQGLQERS KGGDPEGPTD bmy_05374T0/1-817 LEDSKILLVD SPGTGSAEGE QPEEGTSSEQ TNKQGLQERS KEGGPEGPTD BACU016190/1-587 LEDSKILLVD SPGTGSAEGE QPEEGTSSEQ TNKQGLQERS KEGGPEGPTD 651 700 ENSBTAP00000005344/1-813 DLLPQSADTG GREPMEEKLL EIQGKIEAVE MHLTREHMKR VLGEVYLHTW ENSP00000361219/1-822 DSLPTTGDAG GREPMEEKLL EIQGKIEAVE MHLTREHMKR VLGEVYLHTW ENSTTRP00000013367/1-697 DSVTQPGDTG GREPMEEKLL EIQGKIEAVE MHLTREHMKR VLGEVYLHTW bmy_05374T0/1-817 DSLTQSGDIG GREPMEEKLL EIQGKIEAVE MHLTREHMKR VLGEVYLHTW BACU016190/1-587 DSLAQAGDIG GREPMEEKLL EIQGKIEAVE MHLTREHMKR VLGEVYLHTW 701 750 ENSBTAP00000005344/1-813 ITENTSIPTR GLCNFLMSDE EYDDRTARVL IGHISKKMNK QTFPEHCSLC ENSP00000361219/1-822 ITENTSIPTR GLCNFLMSDE EYDDRTARVL IGHISKKMNK QTFPEHCSLC ENSTTRP00000013367/1-697 ITENTSIPTR GLCNFLMSDE EYDDRTARVL IGHISKKMNK QTFPEHCSLC bmy_05374T0/1-817 ITENTSIPTR GLCNFLMSDE EYDDRTARVL IGHISKKMNK QTFPEHCSLC BACU016190/1-587 ITENTSIPTR GLCNFLMSDE EYDDRTARVG VD-------- ---------- 751 800 ENSBTAP00000005344/1-813 KEILPFTDRK QAVCSNGHIW LRCFLTYQSC QSLIYRRCLL HDSIARHPIP ENSP00000361219/1-822 KEILPFTDRK QAVCSNGHIW LRCFLTYQSC QSLIYRRCLL HDSIARHPAP ENSTTRP00000013367/1-697 KEILPFTDRK QAVCSNGHIW LRXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_05374T0/1-817 KEILPFTDRK QAVCSNGHIW LRCFLTYQSC QSLIYRRCLL HDSIARHPAP BACU016190/1-587 ---------- ---------- ---------- ---------- ---------- 801 850 ENSBTAP00000005344/1-813 EDPDWIKRLL QSPCPFCDSP VF ENSP00000361219/1-822 EDPDWIKRLL QSPCPFCDSP VF ENSTTRP00000013367/1-697 XXPDWIKRLL QSPCPFCDSP VF bmy_05374T0/1-817 EDPDWIKRLL QSPCPFCDSP VF BACU016190/1-587 ---------- ---------- --