KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 16:26:23 2014  Check: 00 ..

 Name: ENSP00000388684/1-219     Len:    240  Check:  8328  Weight:  1.00
 Name: ENSBTAP00000005367/1-217  Len:    240  Check:  798  Weight:  1.00
 Name: bmy_00329T0/1-154         Len:    240  Check:  3258  Weight:  1.00
 Name: ENSTTRP00000011275/1-217  Len:    240  Check:  8164  Weight:  1.00

//


                          1                                                   50
ENSP00000388684/1-219     ---------- MAAEDREMME ARGAGESCPT FPKMVPGDSK SEGKPRAYL- 
ENSBTAP00000005367/1-217  ---------- MATEDREMME GRGAGESCPT FPKMAPDDPM SEGKPRASLP 
bmy_00329T0/1-154         ---------- MATEDGKMME GRGAGESCPT FPKMVPDDPM SEGKSRASLA 
ENSTTRP00000011275/1-217  APTGSIVVFW MATEDREMME GRGAGESCPT FPKMVPDDPM SEGKSKASL- 


                          51                                                 100
ENSP00000388684/1-219     -EAESQKPDS SYDYLEEMEA CEDGGCQGPL KSLSPKSCRA -TKGQAGDGP 
ENSBTAP00000005367/1-217  QEADTPKPDS SYDYLEEMET CEDGGCPGPP KVLSSKAGPA TTKGQAGDGL 
bmy_00329T0/1-154         QEAESPKPDS SYDYLEEMET CEDRGCPGPP TSLSSKAGPA TTNGQAGDGP 
ENSTTRP00000011275/1-217  -EAESPKPDS SYDYHEEMET CEDRGCPGPP KSLSSKAGPA TTKGQEGDGP 


                          101                                                150
ENSP00000388684/1-219     KPAELPPTP- -------GTE RNPEMELEKV RMEFELTRLK YLHEKNQRQR 
ENSBTAP00000005367/1-217  ELAELPSVPA TAAPGSPVRE RDAEMELEKV RMEFELKRLK YLHEENERQ- 
bmy_00329T0/1-154         ERAELPLAPA AAAPGTAGPQ RNAEMELEKV RMEFELKRLK CLHKENERQ- 
ENSTTRP00000011275/1-217  ERAEPPLTP- -------GPQ RNDEMELEKM RMEFELERLW YLQEENERQ- 


                          151                                                200
ENSP00000388684/1-219     QHEVVMEQLQ RERQHEVVME QLQQEAAPRL FSGGLQNFLL PQNQFAMFLY 
ENSBTAP00000005367/1-217  ---------- --RQHEEVME QLQQQATPRL FSGGLQDLLL PQNQFAMFLY 
bmy_00329T0/1-154         ---------- --RQHEEVME QL--QATPR- ---------- ---------- 
ENSTTRP00000011275/1-217  ---------- --RQHEEVME QLRQQATPRL FSGGLQDLLL PQNQFAMFLY 


                          201                                                250
ENSP00000388684/1-219     CFIFIHIIYV TKEMVFFLFA KHYLFCIAAI LLCLIKTFWS 
ENSBTAP00000005367/1-217  CFIFIHIIYV TKEMIFFLFS KHYLFCIAAI LLCLIKTLWS 
bmy_00329T0/1-154         ---------- ---------- ---------- ---------- 
ENSTTRP00000011275/1-217  CFIFIHIIYV TKEIVFFLFS KHYLFCIVAM LLCLIKTLWS