KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:26:24 2014 Check: 00 .. Name: bmy_22427T0/1-119 Len: 186 Check: 3831 Weight: 1.00 Name: ENSTTRP00000003998/1-182 Len: 186 Check: 4366 Weight: 1.00 Name: ENSP00000419270/1-184 Len: 186 Check: 1856 Weight: 1.00 Name: ENSBTAP00000005368/1-186 Len: 186 Check: 3472 Weight: 1.00 // 1 50 bmy_22427T0/1-119 MRVRSRSPEK PQSCDGELGR LLRATAEAQE RAAG----AR HPQECGGGAE ENSTTRP00000003998/1-182 MASPAASSVR PPRPKKEPQA LVIPKNAAEE QKLKLERLMK NPDKAVPIPE ENSP00000419270/1-184 MASPAASSVR PPRPKKEPQT LVIPKNAAEE QKLKLERLMK NPDKAVPIPE ENSBTAP00000005368/1-186 MASSAASSVR PPRPKKEPQA LIIPKNAAEE QKLKLERLMK NPDKAVPIPE 51 100 bmy_22427T0/1-119 AQAGTANEEP --------GS SAGAGSGEFH VYRHLRRREY QRQDYMDAMA ENSTTRP00000003998/1-182 KMSEWAPRPP PEFVRDVMGS SAGAGSGEFH VYRHLRRREY QRQDYMDAMA ENSP00000419270/1-184 KMSEWAPRPP PEFVRDVMGS SAGAGSGEFH VYRHLRRREY QRQDYMDAMA ENSBTAP00000005368/1-186 KMSEWAPRPP PEFVRDVMGS SAGAGSGEFH VYRHLRRREY QRQDYMDAMA 101 150 bmy_22427T0/1-119 EKQKLDAEFQ KRLEKNKIAA EEQTAKRRKK R--------- ---------- ENSTTRP00000003998/1-182 EKQKLDAEFQ KRLEKNKIAA EEQTAKRRKK RXXXXXXXXX XXXMKLQKKQ ENSP00000419270/1-184 EKQKLDAEFQ KRLEKNKIAA EEQTAKRRKK RQKLKEKKLL AKKMKLEQKK ENSBTAP00000005368/1-186 EKQKLDAEFQ KRLERNKIAA EEQTAKRRKK RQKLKEKKLL AKKMKLEQKK 151 200 bmy_22427T0/1-119 ---------- ---------- ---------- ------ ENSTTRP00000003998/1-182 K-EGSSQSQE QSSSGSEAAS GT--EEEDEP SFIMG- ENSP00000419270/1-184 Q-EGPGQPKE QGSSSSAEAS GTE-EEEEVP SFTMGR ENSBTAP00000005368/1-186 QSEASSETQE QPSSGSEEAS GTEDEEEDAP SFVTGR