KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:26:24 2014 Check: 00 .. Name: ENSTTRP00000013295/1-414 Len: 452 Check: 4355 Weight: 1.00 Name: ENSP00000349298/1-445 Len: 452 Check: 4818 Weight: 1.00 Name: bmy_00683T0/1-378 Len: 452 Check: 1010 Weight: 1.00 Name: ENSBTAP00000005377/1-380 Len: 452 Check: 5808 Weight: 1.00 Name: BACU017628/1-387 Len: 452 Check: 7107 Weight: 1.00 // 1 50 ENSTTRP00000013295/1-414 ---------- ---------- ---------V CRRLGIIEVD YFGLQFTGSK ENSP00000349298/1-445 MLCYVTRPDA VLMEVEVEAK ANGEDCLNQV CRRLGIIEVD YFGLQFTGSK bmy_00683T0/1-378 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000005377/1-380 ---------- ---------- ---------- ---------- ---------- BACU017628/1-387 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000013295/1-414 GESLWLNLRN RISQQMDGLA PYRLKLRVKF FVEPHLILQE QTRHIFFLHI ENSP00000349298/1-445 GESLWLNLRN RISQQMDGLA PYRLKLRVKF FVEPHLILQE QTRHIFFLHI bmy_00683T0/1-378 ---------- ---------- ----GSDTKL VPQHNLTXTL LCRHIFFLHI ENSBTAP00000005377/1-380 ---------- -----MDGLA PYRLKLRVKF FVEPHLILQE QTRHIFFLHI BACU017628/1-387 ---------- -----MDGLA PYRLKLRVKF FVEPHLILQE QTRHIFFLHI 101 150 ENSTTRP00000013295/1-414 KEALLAGHLQ CSPEQAVELS ALLAQTKFGD YNQNTAKYSY EELCAKELSS ENSP00000349298/1-445 KEALLAGHLL CSPEQAVELS ALLAQTKFGD YNQNTAKYNY EELCAKELSS bmy_00683T0/1-378 KEALLAGHLQ CSPEQAVELS ALLAQTKFGD YSQNTAKYSS EGLCAKELSS ENSBTAP00000005377/1-380 KEALLAGHLQ CSPEQAVELS ALLAQTKFGD YNQNTAKYSY EELCAKELSS BACU017628/1-387 KEALLAGHLQ CSPEQAVELS ALLAQTKFGD YSQNTAKYSS EGLCAKELSS 151 200 ENSTTRP00000013295/1-414 ATLNXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000349298/1-445 ATLNSIVAKH KELEGTSQAS AEYQVLQIVS AMENYGIEWH SVRDSEGQKL bmy_00683T0/1-378 AALSSIVAKH KELEGTSQAS AEYQVLQIVS AMENYGTEWH SVRDSEGQKL ENSBTAP00000005377/1-380 ATLNSIVAKH KELEGTSQAS AEYQVLQIVS AMENYGIEWH SVRDSEGQKL BACU017628/1-387 AALSSIVAKH KELEGTSQAS AEYQVLQIVS AMENYGTEWH SVRDSEGQKL 201 250 ENSTTRP00000013295/1-414 XXXXXXTEGS C--DDFSPIN RIAYPVVQMA TQSGKNVYLT ITKESGNSIV ENSP00000349298/1-445 LIGVGPEGIS ICKDDFSPIN RIAYPVVQMA TQSGKNVYLT VTKESGNSIV bmy_00683T0/1-378 LIGVGPEGIS ICKDDFSPIN RIAYPVVQMA TQSGKNVYLT ITKESGNSIV ENSBTAP00000005377/1-380 LIGVGPEGIS ICKDDFSPIN RIAYPVVQMA TQSGKNVYLT VTKESGNSIV BACU017628/1-387 LIGVGPEGIS ICKDDFSPIN RIAYPVVQMA TQSGKNVYLT VTKESGNSIV 251 300 ENSTTRP00000013295/1-414 LLFKMISTRA ASGLYRAITE THAFYR---- ---CDTVTSA VMMQYSRDLK ENSP00000349298/1-445 LLFKMISTRA ASGLYRAITE THAFYR---- ---CDTVTSA VMMQYSRDLK bmy_00683T0/1-378 LLFKMISTRA ASGLYRAITE THAFYRHVPL CTPCDTVTSA VMMQYSRDLK ENSBTAP00000005377/1-380 LLFKMISTRA ASGLYRAITE THAFYR---- ---CDTVTSA VMMQYSRDLK BACU017628/1-387 LLFKMISTRA ASGLYRAITE THAFYRHVPL CTACDTVTSA VMMQYSRDLK 301 350 ENSTTRP00000013295/1-414 GHLASLFLNE NINLGKKYVF DIKRTSKEAY DHARRALYNA GVLDLVPRTD ENSP00000349298/1-445 GHLASLFLNE NINLGKKYVF DIKRTSKEVY DHARRALYNA GVVDLVSRNN bmy_00683T0/1-378 GHLASLFLNE NINLGKKYVF DIKRTSKEAY DHARRALYNA GVVDLVPRSD ENSBTAP00000005377/1-380 GHLASLFLNE NINLGKKYVF DIKRTSKEAY DHARRALYNA GVVDLLPRSD BACU017628/1-387 GHLASLFLNE NINLGKKYVF DIKRTSKEAY DHARRALYNA GVVDLVPRSD 351 400 ENSTTRP00000013295/1-414 PSPPNSPLKS SESSMSCGSC EGLGCQQTRA LQEKLRKLKE AMLCVLCCEG ENSP00000349298/1-445 QSPSHSPLKS SESSMNCSSC EGLSCQQTRV LQEKLRKLKE AMLCMVCCEE bmy_00683T0/1-378 PSPPNSPLKS SESSMSCGSC EGLGCQQTRA LQEKLRKLKE AMLCVLCCEG ENSBTAP00000005377/1-380 PSPPNSPLKS SESSTSCSSC EGLGCQQTRA LQEKLRKLKE AMLCVLCCEG BACU017628/1-387 PSPPNSPLKS SESSMSCGSC EGLGCQQTRA LQEKLRKLKE AMLCVLCCEG 401 450 ENSTTRP00000013295/1-414 EINSAFCPCG HTVCCEGCAA QLQSCPVCRS RVDHVQHVYL PTHTSLLNLT ENSP00000349298/1-445 EINSTFCPCG HTVCCESCAA QLQSCPVCRS RVEHVQHVYL PTHTSLLNLT bmy_00683T0/1-378 EINSAFCPCG HTVCCEGCAT QLQSCPVCRS RVDHVQHVYL PTHTSLLNLT ENSBTAP00000005377/1-380 EINSAFCPCG HTVCCEGCAA QLQSCPVCRS RVDHIQHVYL PTHTSLLNLT BACU017628/1-387 EINSAFCPCG HTVCCEGCAT QLQSCPVCRS RVDHVQHVYL PTHTSLLNLT 451 500 ENSTTRP00000013295/1-414 VI ENSP00000349298/1-445 VI bmy_00683T0/1-378 VI ENSBTAP00000005377/1-380 VI BACU017628/1-387 VI