KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:26:25 2014 Check: 00 .. Name: BACU014664/1-236 Len: 423 Check: 7901 Weight: 1.00 Name: ENSP00000419371/1-392 Len: 423 Check: 6980 Weight: 1.00 Name: bmy_08833T0/1-381 Len: 423 Check: 9195 Weight: 1.00 Name: ENSTTRP00000015578/1-393 Len: 423 Check: 6680 Weight: 1.00 Name: ENSBTAP00000005379/1-393 Len: 423 Check: 7830 Weight: 1.00 // 1 50 BACU014664/1-236 MDALVEDDIC ILNHEKAHRR DTVTPVSIYS GDESVASHFA LVTAYEDIKK ENSP00000419371/1-392 MDALVEDDIC ILNHEKAHKR DTVTPVSIYS GDESVASHFA LVTAYEDIKK bmy_08833T0/1-381 MDALVEDDIC ILNHEKAHRR DTVTPVSIYS GDESVASHFA LVTAYEDIKK ENSTTRP00000015578/1-393 MDALVEDDIC ILNHEKAHRR DTVTPVSIYS GDESVASHFA LVTAYEDIKK ENSBTAP00000005379/1-393 MDALVEDDIC ILNHEKAHRR DPVTPVSIYS GDESVASHFA LVTAYEDIKK 51 100 BACU014664/1-236 RLKDSEKENS FLKKRIRVLE EKLIGARKDE ETSSVGREQV NKAYHAYREV ENSP00000419371/1-392 RLKDSEKENS LLKKRIRFLE EKLI-ARFEE ETSSVGREQV NKAYHAYREV bmy_08833T0/1-381 RLKDSEKENS FLKKRIRVLE EK-------- ---------- ---------- ENSTTRP00000015578/1-393 RLKDSEKENS FLKKRIRVLE EKLIGARKDE ETSSVGREQV NKAYHAYREV ENSBTAP00000005379/1-393 RLKDSEKENS FLKKRIRILE EKLIGARKDE ETSSVGREQV NKAYHAYREV 101 150 BACU014664/1-236 CIDRDNLKSK LDKMNKDNSE SLKVLNEQLQ SKEVELLQLR TEVETQQVIR ENSP00000419371/1-392 CIDRDNLKSK LDKMNKDNSE SLKVLNEQLQ SKEVELLQLR TEVETQQVMR bmy_08833T0/1-381 ---------- ----NKDNSE SLKVLNEQLQ SKEVELLQLR TEVETQQVIR ENSTTRP00000015578/1-393 CIDRDNLKSK LDKMNKDNSE SLKVLNEQLQ SKEVELLQLR TEVETQQVIR ENSBTAP00000005379/1-393 CIDRDNLKSK LDKMNKDNSE SLKVLNEQLQ SKEVELLQLR TEVETQQVIR 151 200 BACU014664/1-236 NLNPPSSNWE VEKLSCDLKI HGLEQELELM RKECRDLKIE LQKAKQM--- ENSP00000419371/1-392 NLNPPSSNWE VEKLSCDLKI HGLEQELELM RKECSDLKIE LQKAKQTDPY bmy_08833T0/1-381 NLNPPSSNWE VEKLSCDLKI HGLEQELELM RKECRDLKIE LQKAKQMYPS ENSTTRP00000015578/1-393 NLNPPSSNWE VEKLSCDLKI HGLEQELELM RKECRDLKIE LQKAKQTXXX ENSBTAP00000005379/1-393 NLNPPSSNWE VEKLSCDLKI HGLEQELELL RKECRDLRIE LQKAKQTDPS 201 250 BACU014664/1-236 --------EM QRF------- ---------- ---------- ---------- ENSP00000419371/1-392 QEDNLKSRDL QKLSISSDNM QHAYWELKRE MSNLHLVTQV QAELLRKLK- bmy_08833T0/1-381 QEDNLKSRDL QRLSISSDNM QSAYWELKRE MSNLHLVTQS QALVALGIRL ENSTTRP00000015578/1-393 XXXXXXXXXX XXXXXXXDNM QSAYWELKRE MSNLHLVTQV QAELLRKLK- ENSBTAP00000005379/1-393 LDDNLNCRDL QRLSVSSDNM QSAYWELKRE MSNLHLVTQV QAELLRKLK- 251 300 BACU014664/1-236 ---------- ---------- ---------- ---------- ---------- ENSP00000419371/1-392 ---------- ---------- --------TS TAIKKACAPV GCSEDLGRDS bmy_08833T0/1-381 GLRVNLSLLP GERECREREA HPCFVSSVAE QQLESACAPA GCMEDLGKDS ENSTTRP00000015578/1-393 ---------- ---------- --------TP TAIKKACAPA GCMEDLGKDS ENSBTAP00000005379/1-393 ---------- ---------- --------TP AAIKKACAPA GCMEDLGKDS 301 350 BACU014664/1-236 ---------- ---------- ---------- ---------- ---------- ENSP00000419371/1-392 TKLHLMNFTA TYTRHPPLLP NGKALCHTTS SPLPGDVKVL SEKAILQSWT bmy_08833T0/1-381 TKLHLTNFTA TYKRQAPLSP NGKTLCHATS SPLPGDAKVL SEKAALQSWT ENSTTRP00000015578/1-393 TKLHLMNFTA TYKRQAPLSP NSKTLCHATS SPLPGDAKVL SEKAALQSWT ENSBTAP00000005379/1-393 TKLHLSNFTA AYKRHAPLSP NGKTLCHATP SPLPGDAKVL SEKAALQSWT 351 400 BACU014664/1-236 ---------- --------YQ RKQLSSHGQI MSDPFLTMAQ TFRNTILMAE ENSP00000419371/1-392 DNERSIPNDG TCFQEHSSYG RNSLEDNSWV FPSPPKSSET AFGETKTKTL bmy_08833T0/1-381 DHERSIPHDG TNFQEHNSYG RNSLEDNSWV FPSPPKSSET TFGETKNKPL ENSTTRP00000015578/1-393 DHERSIPHDG TNFQEHNSYG RNSLEDNSWV FPSPPKSSET TFGETKNKPL ENSBTAP00000005379/1-393 DHERSIPHDG TNFQEHNSYS RNSLEDNSWV FPSPPKSSET TFGEMKSKPL 401 450 BACU014664/1-236 VL-------- ---------- --- ENSP00000419371/1-392 PLPNLPPLHY LDQHNQNCLY KN- bmy_08833T0/1-381 PLPNLPPLHY LDQHNQNCHY KNN ENSTTRP00000015578/1-393 PLPNLSPLHY LDQHNQNCHY KN- ENSBTAP00000005379/1-393 PLPNLPPLHY LDQHNQNCHY KH-