KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:26:26 2014 Check: 00 .. Name: ENSP00000378416/1-640 Len: 691 Check: 640 Weight: 1.00 Name: ENSBTAP00000005380/1-647 Len: 691 Check: 2007 Weight: 1.00 Name: ENSTTRP00000015929/1-640 Len: 691 Check: 9315 Weight: 1.00 Name: bmy_11553T0/1-665 Len: 691 Check: 3219 Weight: 1.00 Name: BACU005553/1-641 Len: 691 Check: 2484 Weight: 1.00 // 1 50 ENSP00000378416/1-640 ---------- ---------- ---------- ---------- ----MESVVR ENSBTAP00000005380/1-647 ---------- ---------- ---------- ---------- ----METVVR ENSTTRP00000015929/1-640 ---------- ---------- ---------- ---------- ----METVVR bmy_11553T0/1-665 MPDLLPDRPP PAVPRLTDRF RIPFLDTSRY SRALDAPGSV HLRDMETVVR BACU005553/1-641 ---------- ---------- ---------- ---------- ---DMETVVR 51 100 ENSP00000378416/1-640 RCPFLSRVPQ AFLQKAGKSL LFYAQNCPKM MEVGAKPAPR ALSTAAVHYQ ENSBTAP00000005380/1-647 RCPFLSRVPQ AFLQKAGKSL LFYAQNCPKM MEIGAKPAPR ALSTSAVLCQ ENSTTRP00000015929/1-640 RCPFLSRVPQ AFLQKAGKSL LFYAQNCPKM MEVGAKPAPR ALSASAVLCQ bmy_11553T0/1-665 RCPFLSRVPQ AFLQKAGKSL LFYAQNCPKM MEVGAKPAPR ALSTSAVLCQ BACU005553/1-641 RCPFLSRVPQ AFLQKAGKSL LFYAQNCPKM MEVGTKPAPR ALSTSAVLCQ 101 150 ENSP00000378416/1-640 QIKETPPASE KDKTAKAKVQ QTPDGSQQSP -------DGT QLPSGHPLPA ENSBTAP00000005380/1-647 QVTETPPANE KDKAAKAEVQ QAPDGSQQAP DGSQQTADGT QLPSGHPSLA ENSTTRP00000015929/1-640 QVKETPPANE KDKTAKAKVQ QAPDGSQQTP -------DGT QLPSGHASLA bmy_11553T0/1-665 QVKETPPANE KDKTAKAKVQ QAPDGSQQTP -------DGT QLPSGHASLA BACU005553/1-641 QVKETPPANE KDKTAKAKVQ QAPDGSQQTP -------DGT QLPSGHASLA 151 200 ENSP00000378416/1-640 TSQGTASKCP FLAAQMNQRG SSVFCKASLE LQEDVQEMNA VRKEVAETSA ENSBTAP00000005380/1-647 SSQGTGSKCP FLAAEMSQGG SSVFRKASLA LQEDVQEMHA VREEVAQTSV ENSTTRP00000015929/1-640 ASQGSASKCP FLAAQMSQGG SSVFCKASLE LQEDVQEMHA VREEVAQTSV bmy_11553T0/1-665 ASQGTASKCP FLAAQMSQGS SSVFCKASLE LQEDVQEMHA VREEVAQTSV BACU005553/1-641 ASQGTASKCP FLAAQMSQGG SSVFCKASLE LQEDVQEMHA VREEVAQTSV 201 250 ENSP00000378416/1-640 GPSVVSVKTD GGDPSGLLKN FQDIMQKQRP ERVSHLLQDN LPKSVSTFQY ENSBTAP00000005380/1-647 NPSVINVKTE GGELNGLLKN FQDIMRKQRP ERVSHLLQDN LPKSVCTFQY ENSTTRP00000015929/1-640 NPSVISVKTD GGELSGLLKN FQDIMRKQRP EGVSHLLQDN LPKSVSTFQY bmy_11553T0/1-665 NPSVISVKTD GGELSGLLKN FQDIMRKQRP EGVSHLLQDN LPKSVSTFQY BACU005553/1-641 NPSVISVKTD GGELSGLLKN FQDIMRKQRP EGVSHLLQDN LPKSVSTFQY 251 300 ENSP00000378416/1-640 DRFFEKKIDE KKNDHTYRVF KTVNRRAHIF PMADDYSDSL ITKKQVSVWC ENSBTAP00000005380/1-647 DRFFEKKIDE KKNDHSYRVF KTVNRKAQCF PMADDYSDSL ISKKQVSVWC ENSTTRP00000015929/1-640 DHFFEKKIDE KKNDHTYRVF KTVNRRAQLF PMADDYSDSL VTKKQVSVWC bmy_11553T0/1-665 DHFFEKKIDE KKNDHTYRVF KTVNRRAQFF PMADDYSDCL ITKKQVSVWC BACU005553/1-641 DHFFEKKIDE KKNDHTYRVF KTVNRRAQFF PMADDYSDCL ITKKQVSVWC 301 350 ENSP00000378416/1-640 SNDYLGMSRH PRVCGAVMDT LKQHGAGAGG TRNISGTSKF HVDLERELAD ENSBTAP00000005380/1-647 SNDYLGMSRH PRVCGAVIDT LKQHGTGAGG TRNISGTSKF HVDLEQELAD ENSTTRP00000015929/1-640 SNDYLGMSCH PRVCGAVMDT LKQHGTGAGG TRNISGTSKF HVDLEQELAD bmy_11553T0/1-665 SNDYLGMSCH PRVCGAVMDT LKQHGTGAGG TRNISGTSKF HVDLEQELAD BACU005553/1-641 SNDYLGMSCH PRVCGAVMDT LKQHGTGAGG TRNISGTSKF HVDLEQELAD 351 400 ENSP00000378416/1-640 LHGKDAALLF SSCFVANDST LFTLAKMMPG CEIYSDSGNH ASMIQGIRNS ENSBTAP00000005380/1-647 LHGKDAALLF SSCFVANDST LFTLAKMMPG CEIYSDAGNH ASMIQGIRNS ENSTTRP00000015929/1-640 LHGKDAALLF SSCFVANDST LFTLAKMMPG CEIYSDSGNH ASMIQGIWNS bmy_11553T0/1-665 LHGKDAALLF SSCFVANDST LFTLAKMMPG CEIYSDSGNH ASMIQGIWNS BACU005553/1-641 LHGKDAALLF SSCFVANDST LFTLAKMMPG CEIYSDSGNH ASMIQGIWNS 401 450 ENSP00000378416/1-640 RVPKYIFRHN DVSHLRELLQ RSDPSVPKIV AFETVHSMDG AVCPLEELCD ENSBTAP00000005380/1-647 GVPKYIFRHN DVSHLRELLQ RSDPAVPKIV AFETVHSMDG AVCPLEELCD ENSTTRP00000015929/1-640 RVPKYIYRHN DVNHLRELLQ RSDPAVPKIV AFETVHSMDG AVCPLEELCD bmy_11553T0/1-665 RVPKYIYRHN DVSHLRELLQ RSDPAVPKIV AFETVHSMDG AVCPLEELCD BACU005553/1-641 RVPKYIYRHN DVSHLRELLQ RSDPAVPKIV AFETVHSMDG AVCPLEELCD 451 500 ENSP00000378416/1-640 VAHEFGAITF VDEVHAVGLY GARGGGIGDR DGVMPKMDII SGTLGKAFGC ENSBTAP00000005380/1-647 VAHEFGAITF VDEVHAVGLY GLQGGGIGDR DGVMPKMDII SGTLGKAIGC ENSTTRP00000015929/1-640 VAHEFGAITF VDEVHAVGLY GAQGGGIGDR DGVMPKMDII SGTLGKAFGC bmy_11553T0/1-665 VAHEFGAITF VDEVHAVGLY GAQGGGIGDR DGVMPKMDII SGTLGKAFGC BACU005553/1-641 VAHEFGAITF VDEVHAVGLY GAQGGGIGDR DGVMPKMDII SGTLGKAFGC 501 550 ENSP00000378416/1-640 VGGYIASTSS LIDTVRSYAA GFIFTTSLPP MLLAGALESV RILKSAEGRV ENSBTAP00000005380/1-647 VGGYIASTSS LIDTVRSYAA GFIFTTSLPP MLLAGALESV RILRSTEGRT ENSTTRP00000015929/1-640 VGGYIASTSS LIDTIRSYAA GFIFTTSLPP MLLAGALESV RILKSTEGRV bmy_11553T0/1-665 VGGYIASTSS LIDTIRSYAA GFIFTTSLPP MLLAGALESV RILKSTEGRV BACU005553/1-641 VGGYIASTSS LIDTIRSYAA GFIFTTSLPP MLLAGALESV RILKSTEGRV 551 600 ENSP00000378416/1-640 LRRQHQRNVK LMRQMLMDAG LPVVHCPSHI IPVRVADAAK NTEVCDELMS ENSBTAP00000005380/1-647 LRRQHQRNVK LMRQMLMDAG LPVVHCPSHI IPVRVADAAK NTEVCDELMT ENSTTRP00000015929/1-640 LRRQHQRNVK LMRQMLMDAS LPVVHCPSHI IPVRVADAAK NTEVCNELMS bmy_11553T0/1-665 LRRQHQRNVK LMRQMLMDAS LPVVHCPSHI IPVRVADAAK NTEVCNELMS BACU005553/1-641 LRRQHQRNVK LMRQMLMDAS LPVVHCPSHI IPVRVADAAK NTEVCNELMS 601 650 ENSP00000378416/1-640 RHNIYVQAIN YPTVPRGEEL LRIAPTPHHT PQMMNYFLEN LLVTWKQVGL ENSBTAP00000005380/1-647 RHNIYVQAIN YPTVPRGEEL LRIAPTPHHT PQMMSYFVDN LLATWKRVGL ENSTTRP00000015929/1-640 RHNIYVQAIN YPTVRRGEEL LRIAPTPHHT PQMMNYFVEN LLATWKRVGL bmy_11553T0/1-665 RHNIYVQAIN YPTVPRGEEL LRIAPTPHHT PQMMNYFV-- ---------- BACU005553/1-641 RHNIYVQAIN YPTVPRGEEL LRIAPTPHHT PQMMNYFVEN LLATWKRVGL 651 700 ENSP00000378416/1-640 ELKPHSSAEC NFCRRPLHFE VMSEREKSYF SGLSKLVSAQ A ENSBTAP00000005380/1-647 ELKPHSSAEC NFCRRPLHFE MMSEREKSYF SGMSKLVSAQ A ENSTTRP00000015929/1-640 ELKPHSSAEC NFCRRPLHFE VMSEREKSYF FGMSKLVSAQ A bmy_11553T0/1-665 -------AEC NFCRRPLHFE VMSEREKSYF FGMSKLVSAQ A BACU005553/1-641 ELKPHSSAEC NFCRRPLHFE VMSEREKSYF FGMSKLVSAQ A