KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:26:26 2014 Check: 00 .. Name: ENSP00000264193/1-454 Len: 454 Check: 5070 Weight: 1.00 Name: ENSBTAP00000005398/1-449 Len: 454 Check: 4447 Weight: 1.00 Name: ENSTTRP00000013444/1-265 Len: 454 Check: 8757 Weight: 1.00 Name: bmy_12363T0/1-443 Len: 454 Check: 9281 Weight: 1.00 Name: BACU000046/1-354 Len: 454 Check: 9265 Weight: 1.00 // 1 50 ENSP00000264193/1-454 MALQLGRLSS GPCWLVARGG CGGPRAWSQC GGGGLRAWSQ RSAAGRVCRP ENSBTAP00000005398/1-449 MAMNLRWLSA GPCWRAVRGA CGELRAY--- --GELRAWSP RCAAGRLCRP ENSTTRP00000013444/1-265 ---------- ---------- ---------- ---------- ---------- bmy_12363T0/1-443 MAMHLGRLSA GPCWLAARGG C--------- --GELRSWSL RCAAGRFCRS BACU000046/1-354 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000264193/1-454 PGPAGTEQSR GLGHGSTSRG GPWVGTGLAA ALAGLVGLAT AAFGHVQRAE ENSBTAP00000005398/1-449 PGTACGEQSR GLGYGPPVGG GSRLRTRLAA GLAGLVGLAA VAFGHVERAE ENSTTRP00000013444/1-265 ---------- ---------- ---------- ---------- ---------- bmy_12363T0/1-443 PGTACPEQSR GLGYGPTAGG GPRLRTGLAA GLAGLAGLAA AAFGHVERAE BACU000046/1-354 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000264193/1-454 MLPKTSGTRA TSLGRPEEEE DELAHRCSSF MAPPVTDLGE LRRRPGDMKT ENSBTAP00000005398/1-449 MVRKSSGAQS ASLGRPEEED DELARRCRCF MAPPVTDLRE LRRRPDDMKT ENSTTRP00000013444/1-265 ---------- ---------- ---------- ---------- ---------- bmy_12363T0/1-443 MVSKSSGAPS PSPGRPEEED DELARRCSCF MASPVTDLHE LRRRPGDMKT BACU000046/1-354 MVSKSSGPPS PSPGRPEEED DELAPRCSCF MASPVTDLHE LRRRPGDMKT 151 200 ENSP00000264193/1-454 KMELLILETQ AQVCQALAQV DGGANFSVDR WERKEGGGGI SCVLQDGCVF ENSBTAP00000005398/1-449 KMELLILETQ AQVCQALAQV DGGARFSVDR WERKEGGGGI SCVLQDGHVF ENSTTRP00000013444/1-265 ---------- ---------- ---------- ------GGGI SCVLQDGHVF bmy_12363T0/1-443 KMELLILETQ AQVCQALAQV DGGARFSVDR WERKEGGGGI SCVLQDGHVF BACU000046/1-354 KMELLILETQ AQVCQALAQV DGGARFSVDR WERKEGGGGI SCVLQDGNVF 201 250 ENSP00000264193/1-454 EKAGVSISVV HGNLSEEAAK QMRSRGKVLK TKDGKLPFCA MGVSSVIHPK ENSBTAP00000005398/1-449 EKAGVSISVV HGNLSEEAAK QMRSRGKLLK TKDGKLPFSA MGVSSVIHPK ENSTTRP00000013444/1-265 EKAGVSISVV HGNLSEEAAK QMRSRGKKLK TKDGKLPFSA MGVSSVIHPK bmy_12363T0/1-443 EKAGVSISVV HGNLSEEAAK QMRSRGKKLK TKDGKLPFSA MGVSSVIHPK BACU000046/1-354 EKAGVSISVV HGNLSEEAAK QMRSRGKKLK TKDGKLPFSA MGVSSVIHPK 251 300 ENSP00000264193/1-454 NPHAPTIHFN YRYFEVEEAD GNKQWWFGGG CDLTPTYLNQ EDAVHFHRTL ENSBTAP00000005398/1-449 NPHTPTIHFN YRYFEVEEAD GNTLWWFGGG CDLTPTYLNQ EDAVHFHRTL ENSTTRP00000013444/1-265 NPHAPTIHFN YRYFEVEEAD GNKQWWFGGG CDLTPTYLNQ EDAVHFHRT- bmy_12363T0/1-443 NPHAPTIHFN YRYFEVEEAD GNKQWWFGGG CDLTPTYLNQ EDAVHFHRTL BACU000046/1-354 NPHAPTIHFN YRYFEVEEAD GNKQWWFGGG CDLTPTYLNQ EDAVHFHRTL 301 350 ENSP00000264193/1-454 KEACDQHGPD LYPKFKKWCD DYFFIAHRGE RRGIGGIFFD DLDSPSKEEV ENSBTAP00000005398/1-449 KEACDQHGPD LYPKFKKWCD DYFFIAHRGE RRGIGGIFFD DLDSPSKEEV ENSTTRP00000013444/1-265 KEACDQHGPD LYPKFKKWCD DYFFIAHRGE RRGIGGIFFD DLDSPSKEEV bmy_12363T0/1-443 KEACDQHGPD LYPKFKKWCD DYFFIAHRGE RRGIGGIFFD DLDSPSKEEV BACU000046/1-354 KEACDQHGPD LYPKFKKWCD DYFFIAHRGE RRGIGGIFFD DLDSPSKEEV 351 400 ENSP00000264193/1-454 FRFVQSCARA VVPSYIPLVK KHCDDSFTPQ EKLWQQLRRG RYVEFNLLYD ENSBTAP00000005398/1-449 FRFVQSCTQA IIPSYVPLVK KHCNDSFTPQ EKLWQQLRRG RYVEFNLLYD ENSTTRP00000013444/1-265 FCFVQSCAQA VIPSYIPLVK KHCDDSFTPR EKLWQQLRRG RYVEFNLLYD bmy_12363T0/1-443 FRFVQSCTQA VIPSYIPLVK KHCDDSFTPR EKLWQQLRRG RYVEFNLLYD BACU000046/1-354 FRFVQSCTQA VIPSYIPLVK KHCDDSFTPR EKLWQQLRRG RYVEFNLLYD 401 450 ENSP00000264193/1-454 RGTKFGLFTP GSRIESILMS LPLTARWEYM HSPSENSKEA EILEVLRHPR ENSBTAP00000005398/1-449 RGTKFGLFTP GSRIESILMS LPLTARWEYM HSPSENSKEA EMLEVLRHPR ENSTTRP00000013444/1-265 RGTKFGLFTP GSRIESILMS LPLTARXXXX XXXSENSTEA NILEVLCHTR bmy_12363T0/1-443 RGTKFGLFTP GSRIESILMS LPLTARWEYM HSPSENSKEA EILDVLRHPR BACU000046/1-354 RGTKFGLFTP GSRIESILMS LPLTARWEYM HSPSENSKEA EIVDVLRHPR 451 500 ENSP00000264193/1-454 DWVR ENSBTAP00000005398/1-449 DWVP ENSTTRP00000013444/1-265 --VH bmy_12363T0/1-443 DWVH BACU000046/1-354 DWVH