KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:26:27 2014 Check: 00 .. Name: ENSP00000376568/1-299 Len: 301 Check: 6763 Weight: 1.00 Name: ENSBTAP00000005403/1-270 Len: 301 Check: 8080 Weight: 1.00 Name: bmy_18511T0/1-263 Len: 301 Check: 4864 Weight: 1.00 Name: BACU000452/1-251 Len: 301 Check: 8841 Weight: 1.00 // 1 50 ENSP00000376568/1-299 MLKEVLQREG KSYKSETLMY IKKARASENK LSESILAHRE NMRQMIRSFS ENSBTAP00000005403/1-270 ---------- ------MFGM LSSSFEDDPF FSDSFIAHRE SMRQMMRSFS bmy_18511T0/1-263 ---------- -----MILLC I--------F NSDSFMAHQE SMRQMMRNFS BACU000452/1-251 ---------- ---------- ---------- -----MAHRE SMRQMMRNFS 51 100 ENSP00000376568/1-299 EPFGRDLLSI SDGRGRAHNR RGHNDGEDSL TATSCSLVPF GDFGGMHTDV ENSBTAP00000005403/1-270 EPFGRDMLSI SDRRGRARNR MGHEDEENSL T--------- ------HTDV bmy_18511T0/1-263 EPFGRDLFSI SDGRGRARNH TGHEDGENSL T--------- ------RTDV BACU000452/1-251 EPFGRDLFSI SDGRGRARNH TGHEDGENSL T--------- ------RTDV 101 150 ENSP00000376568/1-299 SSFQTMDQMV SNMRNYMQKL ERNFGQLSVD PNGHSFCSSS VMTYSKIGDE ENSBTAP00000005403/1-270 SPFQAMDRMM LNMRNSMQEL QRNFGHLSMD PNGHSFSSSS VMTYSKVGDE bmy_18511T0/1-263 NPFQAMDRMM LNMRNSMQEL QRNFGHLSTD PNGHSFSSSS VMTYSKVGDE BACU000452/1-251 NPFQAMDRMM LNMRNSMQEL QRNFGHLSTD PNGHSFSSSS VMTYSKVGDE 151 200 ENSP00000376568/1-299 PPKVFQASTQ TRRAPGGIKE TRKAMRDSDS GLEKMAIGHH IHDRAHVIKK ENSBTAP00000005403/1-270 PPKVFQASTQ TRRAPGGIKE TRKALRDSDS GLEKMAVGHH LHDRAHVIKK bmy_18511T0/1-263 PPKVFQASTQ TRRAPGGVKE TRRALRDSES GLEKMAVGHH LHDRAHVIKK BACU000452/1-251 PPKVFQASTQ TRRAPGGVKE TRRALRDSES GLEKMAVGHH LRDRAHVIKK 201 250 ENSP00000376568/1-299 SKNKKTGDEE VNQEFINMNE SDAHAFDEEW QSEVLKYKP- GR-HNLGNTR ENSBTAP00000005403/1-270 SKNNKTGDEE VNQEFINMNE CDAHAFDDEW QNEILKYQPR GQWRNLDNSR bmy_18511T0/1-263 SKNKKTGDEE VNQEFINMNE SDAHAFDDEW QNEVLKYQPR GQWHNLENSK BACU000452/1-251 SKNKKTGDEE VNQEFINMNE SDAHAFDDEW QNEVLKYQPR GQWRNLENSK 251 300 ENSP00000376568/1-299 MRSVGHENPG SRELKRREKP QQSPAIEHGR RSNVLGDKLH IKGSSVKSNK ENSBTAP00000005403/1-270 MRSVAHENSG SRELKRREKH HQSPAIEHGR RSNVFVDKLN IKGSPVKINK bmy_18511T0/1-263 MRSIGHENSG SRELKRREKL HQSPAIERGR RSNVFVDKLN IKGSPVKINK BACU000452/1-251 MRSIGHENSG SQELKRREKL HQSPAIERGR RSNVFVDKLN IKGSPVKINK 301 350 ENSP00000376568/1-299 K ENSBTAP00000005403/1-270 K bmy_18511T0/1-263 K BACU000452/1-251 K