KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:26:27 2014 Check: 00 .. Name: ENSP00000307129/1-294 Len: 305 Check: 641 Weight: 1.00 Name: ENSBTAP00000005411/1-293 Len: 305 Check: 1209 Weight: 1.00 Name: bmy_09204T0/1-222 Len: 305 Check: 3318 Weight: 1.00 Name: ENSTTRP00000014729/1-301 Len: 305 Check: 3574 Weight: 1.00 // 1 50 ENSP00000307129/1-294 ---------M ALLTPQGVKE VFQLQRPQGR ERLRRLLNWE EFDEQRDSRR ENSBTAP00000005411/1-293 ---------M ALLTAQGVKK VFQFQKPEGR EHLRRLLNWE EFDELRDSRR bmy_09204T0/1-222 ---------- ---------- MPGPSAPTG- ---------- ---------- ENSTTRP00000014729/1-301 VSQLRTDEAM ALLTPQXXXX XXXXXKPEGR EHLRRLLNWE EFDELRDSRR 51 100 ENSP00000307129/1-294 SILLDTLYES IIFAVGKGFP WVEVAQVVKF TEELLRETKG CSITEAVTIL ENSBTAP00000005411/1-293 SILLDTLYES IIFAVGKGFP WREVAQVVKF TEELLKETKG CSITEAVTIL bmy_09204T0/1-222 ---------- ---------- ---------- ---------- CSITEAVTIL ENSTTRP00000014729/1-301 SILLDTLYES IIFAADKGFP WVEVAQVVKF TEELLEETKG CSTTEAVTIL 101 150 ENSP00000307129/1-294 GNKLRDYRGH FNTTHLLALC DYFHHTFIRH YKLYQYVLGQ DQQVDLTVAH ENSBTAP00000005411/1-293 GNKLRDYQGQ FNTTHLLALC DYFHNTFIRH YKLYQYVLGQ DQDVNLTVTN bmy_09204T0/1-222 GNKLRDYQGQ LNTTHLLAQC DYFHNTFIRH YKLYQYVLGQ DQDVNLTVTH ENSTTRP00000014729/1-301 GNKLRDYQGQ LNTTHLLAQC DYFHNTFIRH YKLYQYVLGQ DQDVKLTVTH 151 200 ENSP00000307129/1-294 LEVCMPPHPL PLAEGMDRDL WIHEQQVATL TEAEAQKRAD VLLLKEALRL ENSBTAP00000005411/1-293 LEVCTPPQPL PLAEGKDREV WKHEQQLEEL STAEVQKRTN MLLLKGALRL bmy_09204T0/1-222 LEVCVPPQPL PLAAGKDQAV WKHEQQVVGL SAAEVQTRAY VLQLKEALQL ENSTTRP00000014729/1-301 LEVYVPPQPL PLAAGKDQAM WKHEQRVVEL SAAEVQKRAY MLQLKEALQL 201 250 ENSP00000307129/1-294 ERENSLQKAF AA-AAPAQPG QVLERQELES LICQAVHTQM ELLQELLQRQ ENSBTAP00000005411/1-293 EQQHLLQETF SQLPGRRH-- QTLNREELEK LITEAIHIQI ECLKELLQYE bmy_09204T0/1-222 EQQHLLQEML PELPGWQH-- QALKREELEN LINEAIHIQI ECLKELLQYE ENSTTRP00000014729/1-301 EQQHLLQAA- ---PGAAQVD QVLKREELEN LINEAIHIQI ECLKELLQCE 251 300 ENSP00000307129/1-294 IQNTFAILDL KLQKKTLNLN APTPIPPPIT SHAGQEEALK PQRASKGKKA ENSBTAP00000005411/1-293 IQITFDILDL KLQKKTLNLN APIPPLVPIA GQPGQDEALK LSKTHKGKKA bmy_09204T0/1-222 IQITFDILDL KLQKKTLNLN APTPSPLPIM GQSGQDEALK LYKANKGRKA ENSTTRP00000014729/1-301 IQTTFDILDL KLQKKTLNLN APTPSPLPVT GQSGQDKALN LYKANKGRKA 301 350 ENSP00000307129/1-294 KARK- ENSBTAP00000005411/1-293 KAKK- bmy_09204T0/1-222 KAKKK ENSTTRP00000014729/1-301 KAKKM