KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:26:38 2014 Check: 00 .. Name: ENSP00000365538/1-340 Len: 341 Check: 5048 Weight: 1.00 Name: bmy_12122T0/1-256 Len: 341 Check: 2357 Weight: 1.00 Name: ENSBTAP00000005451/1-341 Len: 341 Check: 9683 Weight: 1.00 Name: BACU017449/1-207 Len: 341 Check: 4620 Weight: 1.00 Name: ENSTTRP00000002408/1-340 Len: 341 Check: 9252 Weight: 1.00 // 1 50 ENSP00000365538/1-340 MALRLLRRAA RGA-AAAALL RLKASLAADI PRLGYSSSSH HKYIPRRAVL bmy_12122T0/1-256 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000005451/1-341 MAQRLLRRAA RGATAAAALP RLKASLAAEV SRLGCSSSPS HKYIPRRAVL BACU017449/1-207 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002408/1-340 MALCLLRRAA RGA-AAAALP RLKASLAADV SRLGYSSSPN HKYIPRRAVL 51 100 ENSP00000365538/1-340 YVPGNDEKKI KKIPSLNVDC AVLDCEDGVA ANKKNEARLR IVKTLEDIDL bmy_12122T0/1-256 ---------- ---------- -MINLGDTFY LHLQDEARLR IVKTLEDFDL ENSBTAP00000005451/1-341 YVPGNDEKKI NKIPSLNVDC AVLDCEDGVA VNKKDEARLR IVKTLEDFDL BACU017449/1-207 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002408/1-340 YVPGNDEKKI KKIPSLNVDC AVLDCEDGVA VNKKDEARLR IVKTLEDFDL 101 150 ENSP00000365538/1-340 GPTEKCVRVN SVSSGLAEED LETLLQSRVL PSSLMLPKVE SPEEIQWFAD bmy_12122T0/1-256 GPTEKCVRIN SVSSGLAEED LQALLRSRVL PSSLMLPKVE DPEEIQWFSD ENSBTAP00000005451/1-341 GPTEKCVRIN SVSSGLAEED LEAILQSRVL PSSLMLPKVE GPEEIQWLSD BACU017449/1-207 ---------- ---------- ---------- ----MLPKVE DPEEIQWFSD ENSTTRP00000002408/1-340 GPTEKCVRIN SVSSGLAEED LQALLRSRVL PSSLMLPKVE DPEEIQWFSD 151 200 ENSP00000365538/1-340 KFSFHLKGRK LEQPMNLIPF VETAMGLLNF KAVCEETLKV GPQVGLFLDA bmy_12122T0/1-256 KFSFYLQGRK LEQPMNLIPF VETAMGLLNF KAVCEEALKN GPQVGLFLDA ENSBTAP00000005451/1-341 KFSFYLKDRK LEQPMNLIPF VETAMGLLSF KAVCEEAVKN GPRVGLFLDA BACU017449/1-207 KFSFYLQGRK LEQPMNLIPF VETAMGLLNF KAVCEEALKN GPQVGLFLDA ENSTTRP00000002408/1-340 KFSFYLQGRK LEQPMNLIPF VETAMGLLNF KAVCEEALKN GPQVGLFLDA 201 250 ENSP00000365538/1-340 VVFGGEDFRA SIGATSSKET LDILYARQKI VVIAKAFGLQ AIDLVYIDFR bmy_12122T0/1-256 VVFGGEDFRA SIGATSSKET QDILYARQKI IVVAKAFGLQ AIDLVYIDFQ ENSBTAP00000005451/1-341 VVFGGEDFRA SIGATSSKET QDILYARQKI IVVAKAFGLQ AIDLVYIDFR BACU017449/1-207 VVFGGEDFRA SIGATSSKET QDILYARQKI IVVAKAFGLQ AIDLVYIDFQ ENSTTRP00000002408/1-340 VVFGGEDFRA SIGATSSKET QDILYARQKI IVVAKAFGLQ AIDLVYIDFQ 251 300 ENSP00000365538/1-340 DGAGLLRQSR EGAAMGFTGK QVIHPNQIAV VQEQFSPSPE KIKWAEELIA bmy_12122T0/1-256 DGEGLLKQSR EGAAMGFTGK QVIHPNQIAV VQEQFSPSPE KIKWAEELIA ENSBTAP00000005451/1-341 DEEGLLRQSR EGAAMGFTGK QVIHPNQIAV VQEQFSPSAE KIKWAEELIA BACU017449/1-207 DGEGLLKQSR EGAAMGFTGK QVIHPNQIAV VQEQFSPSPE KIKWAEELIA ENSTTRP00000002408/1-340 DGEGLLKQSR EGAAMGFTXX XXXXXXXIAV VQEQFSPSPE KLKWAEELIA 301 350 ENSP00000365538/1-340 AFKEHQQLGK GAFTFQGSMI DMPLLKQAQN TVTLATSIKE K bmy_12122T0/1-256 AFKEHQQLGK K--------- ----LMRKER AESIPVSGPQ - ENSBTAP00000005451/1-341 AFKEHQQLGK GAFTFRGSMI DMPLLKQAQN IVTLATSIKE K BACU017449/1-207 AFKEHQQLGK GAFTFRGSVI DMPLLKQAQN IVRLAISIKE K ENSTTRP00000002408/1-340 AFKEHQQLGK GAFTFRGSVI DMPLLKQAQN IVRLAISIKE K