KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:26:39 2014 Check: 00 .. Name: ENSP00000375855/1-246 Len: 265 Check: 3852 Weight: 1.00 Name: ENSBTAP00000005468/1-245 Len: 265 Check: 3777 Weight: 1.00 Name: ENSTTRP00000011582/1-264 Len: 265 Check: 9613 Weight: 1.00 Name: bmy_04376T0/1-216 Len: 265 Check: 382 Weight: 1.00 Name: BACU001534/1-193 Len: 265 Check: 4495 Weight: 1.00 // 1 50 ENSP00000375855/1-246 ---------- ---------M EEAKSQSLEE DFEGQATHTG PKGVINDWRK ENSBTAP00000005468/1-245 ---------- ---------M EKAKSKSLEE DFEGQASHTG PKGVINDWRK ENSTTRP00000011582/1-264 VNLIHTETPG TIISNLISKM EGAKRQSLEE DSEGQATHTG PKGVISDWRK bmy_04376T0/1-216 ---------- ---------M EGAKRQSLEE DSEGQATHTG PKGVINDWRK BACU001534/1-193 ---------- ---------M SSPQSRD-DK DSKERFSR-- -KMSVQEY-- 51 100 ENSP00000375855/1-246 FKLESQDSDS IPPSKKEILR QMSSPQSRNG KDSKERVSRK MSIQEYELIH ENSBTAP00000005468/1-245 FKLESEDSDS VAPSKKEILR QMSSPQSRDD KDSKERFSRK MSVQEYELIH ENSTTRP00000011582/1-264 FKLESEDNNS LPPSKKEILR QMSSPQSGDD KDPKERFSRK MSVQEYELIH bmy_04376T0/1-216 FKLESEDSNS FPPSKKEILR QMSSPQSRDD KDSKERFSRK ---------- BACU001534/1-193 ---------- ---------- ---------- ---------- ------ELIH 101 150 ENSP00000375855/1-246 KEKEDENCLR KYRRQCMQDM HQKLSFGPRY GFVYELETGK QFLETIEKEL ENSBTAP00000005468/1-245 KDKEDENCLR KYRRQCMQDM HQKLSFGPRY GFVYELESGE QFLETIEKEQ ENSTTRP00000011582/1-264 REKEDENCLR KYRRQCMQDM HQKLSFGPRY GFVYELESGE QFLETIEKEQ bmy_04376T0/1-216 ---------- ---------M HQKLSFGPRY GFVYELESGE QFLETIEKEQ BACU001534/1-193 REKEDENCLR KYRRQCMQDM HQKLSFGPRY GFVYELESGE QFLETIEKEQ 151 200 ENSP00000375855/1-246 KITTIVVHIY EDGIKGCDAL NSSLTCLAAE YPIVKFCKIK ASNTGAGDRF ENSBTAP00000005468/1-245 KITTIVVHIY EDGIKGCDAL NSSLICLAAE YPMVKFCKIK ASNTGAGDRF ENSTTRP00000011582/1-264 KTITIIVHIY EDGIKGCDAL NSSLICLAAE YPTVKFCKIK ASNTGAGDRF bmy_04376T0/1-216 KIITIIVHIY EDGIKGCDAL NSSLICLAAE YPTVKFCKIK ASNTGAGDRF BACU001534/1-193 KIITIIVHIY EDGIKGCDAL NSSLICLAAE YPTVKFCKIK ASNTGAGDRF 201 250 ENSP00000375855/1-246 SLDVLPTLLI YKGGELISNF ISVAEQFAEE FFAGDVESFL NEYGLLPERE ENSBTAP00000005468/1-245 SSDVLPTLLV YKGGELLSNF ISVTEQLAEE FFTGDVESFL NEYGLLPEKE ENSTTRP00000011582/1-264 SSDVLPTLLV YKGGELISNF ISVAEQFAEE FFTGDVESFL NEYGLLPETE bmy_04376T0/1-216 SSDVLPTLLV YKGGELISNF ISVAEQFAKE FFTGDVESFL NEYGLLPETE BACU001534/1-193 SSDVLPTLLV YKGGELISNF ISVAEQFAEE FFTGDVESFL NEYGLLPETE 251 300 ENSP00000375855/1-246 VHVLEHTKIE EEDVE ENSBTAP00000005468/1-245 MHVLEQSNM- EEDME ENSTTRP00000011582/1-264 MHVLDQSNM- EEDME bmy_04376T0/1-216 MHVXEQSNX- EEDME BACU001534/1-193 MHVLEQSNT- EEDME