KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:26:44 2014 Check: 00 .. Name: ENSP00000319636/1-378 Len: 382 Check: 7452 Weight: 1.00 Name: ENSBTAP00000005494/1-362 Len: 382 Check: 1503 Weight: 1.00 Name: bmy_01449T0/1-357 Len: 382 Check: 703 Weight: 1.00 Name: BACU013636/1-357 Len: 382 Check: 950 Weight: 1.00 // 1 50 ENSP00000319636/1-378 MLPPQPSAAH QGRGGRSGLL PKGPAMLCRL CWLVSYSLAV LLLGCLLFLR ENSBTAP00000005494/1-362 --RARTASAH QRSPCRTT-- -----MFHKV GWLVLYSLAV LLLSCLFLLK bmy_01449T0/1-357 ---------- ---------- -----MSRRV GWLALYSLAV LLLGCLFFLK BACU013636/1-357 ---------- ---------- -----MLRRV GWLVLYSLAV LLLSCLFFLK 51 100 ENSP00000319636/1-378 KAAKPAGDPT AHQPFWAPPT PRHSRCPPNH TVSSASLSLP SRHRLFLTYR ENSBTAP00000005494/1-362 KEAQPAGGPV ARQPFWAPPG LRRSPCLPNH TVANASLFLP TRHRLFLTYR bmy_01449T0/1-357 KEAHPAGGPM ARQPFWAPPG PRRSQCPPNH TVANASLFLP NRHRLFLTYR BACU013636/1-357 KAAHPAGGPT ARQPFWAPPG PRRSQCPPNH TVANASLFLP NRHRLFLTYR 101 150 ENSP00000319636/1-378 HCRNFSILLE PSGCSKDTFL LLAIKSQPGH VERRAAIRST WGRVGGWARG ENSBTAP00000005494/1-362 HCRNFSILLE PSGCAEDTFL LLAIKSQPGH VERRAAIRST WGRAGSWAKG bmy_01449T0/1-357 HCRNFSILLE PSGCAEDTFL LLAIKSQPGH VERRAAIRST WGRAGSWAKG BACU013636/1-357 HCRNFSILLE PSGCAEDTFL LLAIKSQPGH VERRAAIRST WGRAGSWAKG 151 200 ENSP00000319636/1-378 RQLKLVFLLG VAGSAPPAQL LAYESREFDD ILQWDFTEDF FNLTLKELHL ENSBTAP00000005494/1-362 RQLKLVFLLG LAGPAPPAQL LAYESREFDD ILQWDFAEDF FNLTLKELHL bmy_01449T0/1-357 RQLKLVFLLG VAGSAPPAQL LAYESREFDD ILQWDFAEDF FNLTLKELHL BACU013636/1-357 RQLKLVFLLG VAGSAPPAQL LAYEGREFDD ILQWDFAEDF FNLTLKELHL 201 250 ENSP00000319636/1-378 QRWVVAACPQ AHFMLKGDDD VFVHVPNVLE FLDGWDPAQD LLVGDVIRQA ENSBTAP00000005494/1-362 QRWVAAACPQ ANFILKGDDD VFVHIPNVLE FLDGWDPAQD LLVGDVIRQA bmy_01449T0/1-357 QRWVAAACSQ AHFMLKGDDD VFVHVPNVLE FLDGWDPAQD LLVGDVIRQA BACU013636/1-357 QRWVAAACSQ AHFMLKGDDD VFVHVPNVLE FLDGWDPAQD LLVGDVIRQA 251 300 ENSP00000319636/1-378 LPNRNTKVKY FIPPSMYRAT HYPPYAGGGG YVMSRATVRR LQAIMEDAEL ENSBTAP00000005494/1-362 LPNRNTKVKY FIPPSMYRAR HYPPYAGGGG YVMSRATVQR LQLAVEEAEL bmy_01449T0/1-357 LPNRNTKVKY FIPPSMYRAR HYPPYAGGGG YVMSRATVQH LQAAVEEAEL BACU013636/1-357 LPNRNTKVKY FIPPSMYRAR HYPPYAGGGG YVMSRATVQH LQAAVEEAEL 301 350 ENSP00000319636/1-378 FPIDDVFVGM CLRRLGLSPM HHAGFKTFGI RRPLDPLDPC LYRGLLLVHR ENSBTAP00000005494/1-362 FPIDDVFVGM CLRKLGVSPM HHAGFKTFGI RRPLNPLDPC LYRGLLLVHR bmy_01449T0/1-357 FPIDDVFVGM CLKKLGVSPM HHAGFKTFGI RQPLDPLDPC LYRGLLLVHR BACU013636/1-357 FPIDDVFVGM CLKKLGVSPV HHAGFKTFGI RRPLDPLDPC LYRGLLLVHR 351 400 ENSP00000319636/1-378 LSPLEMWTMW ALVTDEGLKC AAGPIPQR-- -- ENSBTAP00000005494/1-362 LNPLEMWTMW SLVIDEGLKC A--------- -- bmy_01449T0/1-357 LSPLEMWTMW ALVTDEGLKC AAAPLSQLRG VG BACU013636/1-357 LSPLEMWTMW ALVTDEGLKC AAAPLSQLRG VG