KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 4 Type: P Thu May 15 16:26:45 2014 Check: 00 ..
Name: BACU013638/1-691 Len: 708 Check: 4561 Weight: 1.00
Name: ENSBTAP00000005508/1-596 Len: 708 Check: 9467 Weight: 1.00
Name: bmy_01452T0/1-506 Len: 708 Check: 3409 Weight: 1.00
Name: ENSTTRP00000014969/1-596 Len: 708 Check: 4348 Weight: 1.00
//
1 50
BACU013638/1-691 MATHLSYGRV NLNVLREAVR RELREFLDKC AGSKDLSVPL SNWQYNSEEK
ENSBTAP00000005508/1-596 MAAHLSYGRV NLNVLREAVR RELREFLDKC AGSK------ ----------
bmy_01452T0/1-506 MATHLSYGRV NLNVLREAVR RELREFLDKC AGS------- ----------
ENSTTRP00000014969/1-596 MAAHLSYGRV NLNVLREAVR RELREFLDKC AGSK------ ----------
51 100
BACU013638/1-691 RKIGETQESV LERIGPQEAI VWDEYLTGPF GLIAQYSLLK EHEVEKMFTL
ENSBTAP00000005508/1-596 ---------- --------AI VWDEYLTGPF GLIAQYSLLK EHEVEKMFTL
bmy_01452T0/1-506 ---------- ---------- ---------- ---------K EHEVEKMFTL
ENSTTRP00000014969/1-596 ---------- --------AI VWDEYLTGPF GLIAQYSLLK EHEVEKMFTL
101 150
BACU013638/1-691 KGSRLPAADV KNIIFVVRPR LELMDIISEN VLSEDRRGPA RDFHILFVPR
ENSBTAP00000005508/1-596 KGSRLPAADV KNIIFFVRPR LELMDIIAEN VLSEDRRGPA RDFHILFVPR
bmy_01452T0/1-506 KGSRLPAADV KNIIFVVRPR LELMDIISEN VL-------- ----------
ENSTTRP00000014969/1-596 KGSRLPAADV KNIIFVVRPR LELMDIIAEN VLSEDRRGPA RDFHILFVPR
151 200
BACU013638/1-691 RSLLCEQRLK DLGVLGSFIH REEYSLDLIP FDGDLLSMES EGAFKECYLE
ENSBTAP00000005508/1-596 RSLLCEQRLK DLGVLGSFIH REEYSLDLIP FDGDLLSMES EGAFKECYLE
bmy_01452T0/1-506 ---------- ---------- REEYSLDLIP FDGDLLSMES EGAFKECYLE
ENSTTRP00000014969/1-596 RSLLCEQRLK DLGVLGSFIH REEYSLDLIP FDGDLLSMES EGAFKECYLE
201 250
BACU013638/1-691 SDQTSLYHAA KGLMTLQALY GTIPQIFGKG ECAR------ ----------
ENSBTAP00000005508/1-596 SDQTSLYHAA KGLMTLQALY GTIPQIFGKG ECAR------ ----------
bmy_01452T0/1-506 SDQTSLYHAA KGLMTLQALY GTIPQIFGKG ECARVRNGRR APADPMFYFQ
ENSTTRP00000014969/1-596 SDQTSLYHAA KGLMTLQALY GTIPQIFGKG ECAR------ ----------
251 300
BACU013638/1-691 QVANMMIRMK REFTGSQNSI FPVFDNLLLL DRNVDLLTPL ATQLTYEGLI
ENSBTAP00000005508/1-596 QVANMMIRMK REFTGSQNSI FPVFDNLLLL DRNVDLLSPL ATQLTYEGLI
bmy_01452T0/1-506 QVANMMIRMK REFTGSQNSI FPVFDNLLLL DRNVDLLTPL ATQLTYEGLI
ENSTTRP00000014969/1-596 QVANMMIRMK REFTGSQNSI FPVFDNLLLL DRNVDLLTPL ATQLTYEGLI
301 350
BACU013638/1-691 DEIYGIQNSY VKLPPEKFAP KKQGDGGKDL PTEAKKLQLN SAEELYAEIR
ENSBTAP00000005508/1-596 DEIYGIQNSY VKLPPEKFAP KKQGDGGKDL PTEAKKLQLN SAEELYAEIR
bmy_01452T0/1-506 DEIYGIQNSY VKLPPEKFAP KKQGDGGKDL PTEAKKLQLN SAEELYAEIR
ENSTTRP00000014969/1-596 DEIYGIQNSY VKLPPEKFAP KKQGDGGKDL PTEAKKLQLN SAEELYAEIR
351 400
BACU013638/1-691 DKNFNAVGSV LSKKAKVISA AFEERHNAKT VGEIKQFVSQ LPHMQAARGS
ENSBTAP00000005508/1-596 DKNFNAVGSV LSKKAKVISA AFEERHNAKT VGEIKQFVSQ LPHMQAARGS
bmy_01452T0/1-506 DKNFNAVGSV LSKKAKVISA AFEERHNAKT VGEIKQFVSQ LPHMQAARGS
ENSTTRP00000014969/1-596 DKNFNAVGSV LSKKAKVISA AFEERHNAKT VGEIKQFVSQ LPHMQAARGS
401 450
BACU013638/1-691 LANHTSIAEL IKDVTTSEDF FDKLTVEQEF MSGIDTDKVN SYIEDCIAQK
ENSBTAP00000005508/1-596 LANHTSIAEL IKDVTTSEDF FDKLTVEQEF MSGIDTDKVN SYIEDCIAQK
bmy_01452T0/1-506 LANHTSIAEL IKDVTTSEDF FDKLTVEQEF MSGIDTDK-- ----------
ENSTTRP00000014969/1-596 LANHTSIAEL IKDVTTSEDF FDKLTVEQEF MSGIDTDKXX XXXXXXXXXX
451 500
BACU013638/1-691 HPLIKVLRLV CLQSVCNSGL KQKVLDYYKR EILQTYGYEH ILTLHNLEKT
ENSBTAP00000005508/1-596 HPLIKVLRLV CLQSVCNSGL KQKVLDYYKR EILQTYGYEH ILTLHNLEKA
bmy_01452T0/1-506 ---------- ---------- ---------- ----TYGYEH ILTLHNLEKT
ENSTTRP00000014969/1-596 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXTYGYEH ILTLYNLEKA
501 550
BACU013638/1-691 GLLKPQTGGR NTYPTIRKTL RLWMDDVNEQ NPMDISYVYS GYAPLSVRLA
ENSBTAP00000005508/1-596 GLLKPQTGGR NNYPTIRKTL RLWMDDVNEQ NPTDISYVYS GYAPLSVRLA
bmy_01452T0/1-506 GLLKPQTGGR NTYPTIRKTL RLWMDDVNEQ NPTDISYVYS GYAPLSVRLA
ENSTTRP00000014969/1-596 GLLKPQTGGR NTYPTVRKTL RLWMDDVNEQ NPTDISYVYS GYAPLSVRLA
551 600
BACU013638/1-691 QLLSRPGWRS IEEVLRILPG PHFEERQPLP TGLQKKRQPG ENRVTLIFFL
ENSBTAP00000005508/1-596 QLLSRPGWRS IEEVLRILPG PHFEERQPLP TGLQKKRQPG ENRVTLIFFL
bmy_01452T0/1-506 QLLSRPGWRS IEEVLRILPG PHFEERQPLP TGLQKKRQPG ENRVTLIFFL
ENSTTRP00000014969/1-596 QLLSRPGWRS IEEVLRILPG PHFEERQPLP TGLQKKRQPG ENRVTLIFFL
601 650
BACU013638/1-691 GGVTFAEIAA LRFLSQLEDG ALLTSLECMQ AYLWTPDRRG TVELLRWTSR
ENSBTAP00000005508/1-596 GGVTFAEIAA LRFLSQLEDG ---------- ---------G T---------
bmy_01452T0/1-506 GGVTFAEIAA LRFLSQLEDG ---------- ---------G T---------
ENSTTRP00000014969/1-596 GGVTFAEIAA LRFLSQLEDG ---------- ---------G T---------
651 700
BACU013638/1-691 GNFPESSGLP RRAMPASTTI HVLQLLRELL AFVLLSYTVL IGALLLAGWT
ENSBTAP00000005508/1-596 ---------- ---------- ---------- EYVIATTKLI NG----ASWL
bmy_01452T0/1-506 ---------- ---------- ---------- EYVIATTKLI NG----ASWI
ENSTTRP00000014969/1-596 ---------- ---------- ---------- EYVIATTKLI NG----ASWI
701 750
BACU013638/1-691 TYFMVLK-
ENSBTAP00000005508/1-596 ESLMEKPF
bmy_01452T0/1-506 ESLMEKPF
ENSTTRP00000014969/1-596 ESLMEKPF