KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:26:46 2014 Check: 00 .. Name: ENSTTRP00000006202/1-575 Len: 604 Check: 4879 Weight: 1.00 Name: ENSP00000361483/1-600 Len: 604 Check: 5784 Weight: 1.00 Name: bmy_08579T0/1-385 Len: 604 Check: 7123 Weight: 1.00 Name: BACU016216/1-518 Len: 604 Check: 6790 Weight: 1.00 Name: ENSBTAP00000005512/1-556 Len: 604 Check: 38 Weight: 1.00 // 1 50 ENSTTRP00000006202/1-575 MAAPAPVGSS GSRSPRLIAG LRLFPLLGLL QLLVEPGLGR VHHLALKDDV ENSP00000361483/1-600 MAALAPVGSP ASRGPRLAAG LRLLPMLGLL QLLAEPGLGR VHHLALKDDV bmy_08579T0/1-385 MAAPASVGSS GSRSPRLAAG LRLFPLLGLL QLLAEPSLGR VHHLALKDDV BACU016216/1-518 MAAPAFVGSS GSRSPRLPAG LRLFPLLGLL QLLAEPGLGR VHHLALKDDV ENSBTAP00000005512/1-556 MAAPAPVGLS GSRSPRLASG LRLFPLLGLL QLLAEPGLGR VHHLALKDDV 51 100 ENSTTRP00000006202/1-575 RHKVHLNTFG FFKNGYMMVN VSSLSVSEPQ GATDKDATIG FSLDRTKNDG ENSP00000361483/1-600 RHKVHLNTFG FFKDGYMVVN VSSLSLNEPE ---DKDVTIG FSLDRTKNDG bmy_08579T0/1-385 RHKVHLNTFG FFKDGYMMVN VSSLSVNEXE XTTDKDAAIG FSLDRTKNDG BACU016216/1-518 RHKVHLNTFG FFKNGYMMVN VSSLSVNEPE GTTDKDAAIA FSLDRTKNDG ENSBTAP00000005512/1-556 RHKVHLNTFG FFKNGYMKVN VSSLSVNEPK GATDKDFTIG FSLDRTKNDG 101 150 ENSTTRP00000006202/1-575 FSSYLDEDVN YCILKKQSAS VTLLILDISR SEVRIRSPPE AGTQLPKIIF ENSP00000361483/1-600 FSSYLDEDVN YCILKKQSVS VTLLILDISR SEVRVKSPPE AGTQLPKIIF bmy_08579T0/1-385 FSSYLDEDVN YCILKKQSAS VTLLILDISR SEQQERNP-- -------FLF BACU016216/1-518 FSSYLDEDVN YCILKKQSAS VTLLILDISR SEVRIRSPPE AGTQLPKIIF ENSBTAP00000005512/1-556 FSSYLDEDVN YCILKKQSAS VTLLILDISR SEVKIRSPPE AGAQLPKIIF 151 200 ENSTTRP00000006202/1-575 SKDEKVLGQS QEPGVNAVSA GSQTQKKQDS GKSERSTVDS KATGEKSFSV ENSP00000361483/1-600 SRDEKVLGQS QEPNVNPASA GNQTQKTQDG GKSKRSTVDS KAMGEKSFSV bmy_08579T0/1-385 L---IMVGQ- ---------- ---------- ---------- ---------- BACU016216/1-518 SKNEKVLGQN QEPGVNAVSA GSQTQKKQDS GKSERSTVDS KATGEKSFSV ENSBTAP00000005512/1-556 TKDEKVVGQS QEPGVNPVSS GSQAPKEQES GKSKRSTVDS KATGEKSFSV 201 250 ENSTTRP00000006202/1-575 RNNDGAVSFQ FFFNISTEDQ EGLYSLYFHK CPGSEVRSND KFSFSLDIEI ENSP00000361483/1-600 HNNGGAVSFQ FFFNISTDDQ EGLYSLYFHK CLGKELPS-D KFTFSLDIEI bmy_08579T0/1-385 ---------- --FHFSTEDQ EGLYSLYFHK CPGSEIRSND KFSFSLDIDI BACU016216/1-518 RNNDGAVSFQ FFFNISTEDQ EGLYSLYFHK CPGSEIRSND KFSFSLDIDI ENSBTAP00000005512/1-556 HNNDGAVSFQ FFFNISTDDQ EGLYSLYFHK CLGSDAWSND KFSFSLDIEI 251 300 ENSTTRP00000006202/1-575 TEKNPDSYLS AGEIPLPKLY ISMAFFFLLS GTIWIHILRK RRNDVFKIHW ENSP00000361483/1-600 TEKNPDSYLS AGEIPLPKLY ISMAFFFFLS GTIWIHILRK RRNDVFKIHW bmy_08579T0/1-385 TEKNPDSYLS AGEIPLPKLY ISMAFFFFLS GTIWIHILRK RRNDVFKIHW BACU016216/1-518 TEKNPDSYLS AGEIPLPKLY ISMAFFFFLS GTIWIHILRK RRNDVFKIHW ENSBTAP00000005512/1-556 TEKNPDSYLS AGEIPLPKLY ISMAFFFFLS GTIWIHILRK RRNDVFKIHW 301 350 ENSTTRP00000006202/1-575 LMAALPFTKS LSLVFHAIDY HYISSQGFPI EGWAVVYYIT HLLKGALLFI ENSP00000361483/1-600 LMAALPFTKS LSLVFHAIDY HYISSQGFPI EGWAVVYYIT HLLKGALLFI bmy_08579T0/1-385 LMAALPFTKS LSLVFHAIDY HYISSQGFPI EGWAVVYYIT HLLKGALLFI BACU016216/1-518 LMAALPFTKS LSLVFHAIDY HYISSQGFPI EGWAVVYYIT HLLKGALLFI ENSBTAP00000005512/1-556 LMAALPFTKS LSLVFHAIDY HYISSQGFPI EGWAVVYYIT HLLKGALLFI 351 400 ENSTTRP00000006202/1-575 TIALIGTGWA FIKHILSDKD KKIFMIVIPL QVLANVAYII IESTEEGTTE ENSP00000361483/1-600 TIALIGTGWA FIKHILSDKD KKIFMIVIPL QVLANVAYII IESTEEGTTE bmy_08579T0/1-385 TIALIGTGWA FIKHILSDKD KKIFMIVIPL QVLANVAYII IESTEEGTTE BACU016216/1-518 TIALIGTGWA FIKHILSDKD KKIFMIVIPL QVLANVAYII IESTEEGTTE ENSBTAP00000005512/1-556 TIALIGTGWA FIKHILSDKD KKVFMVVIPL QVLANVAYII IESTEEGTTE 401 450 ENSTTRP00000006202/1-575 YGLWKDSLFL VDLLCCGAIL FPVVWSIRHL QEASATDGKG DSMGPLQQRA ENSP00000361483/1-600 YGLWKDSLFL VDLLCCGAIL FPVVWSIRHL QEASATDGKG DSMGPLQQRA bmy_08579T0/1-385 YGLWKDSLFL VDLLCCGAIL FPVVWSIRHL QEASATDGKG ---------- BACU016216/1-518 YGLWKDSLFL VDLLCCGAIL FPVVW-LRHS PLTAA----- ---------- ENSBTAP00000005512/1-556 YGLWKDSLFL VDLLCCGAIL FPVVWSIRHL QEASATDGKA ---------- 451 500 ENSTTRP00000006202/1-575 NMKTGSP--- ---------- ---------- ------AAAI NLAKLKLFRH ENSP00000361483/1-600 NLRAGSRIES HHFAQADLEL LASSCPPASV SQRAGITAAI NLAKLKLFRH bmy_08579T0/1-385 ---------- ---------- ---------- ---------- ---------- BACU016216/1-518 ---------- ---------- ---------- ---------I NLAKLKLFRH ENSBTAP00000005512/1-556 ---------- ---------- ---------- --------AI NLAKLKLFRH 501 550 ENSTTRP00000006202/1-575 YYVLXXXXXX XXXXXXXXXX XXXXXXXXXX XXLLDEMATL VFFVLTGYKF ENSP00000361483/1-600 YYVLIVCYIY FTRIIAFLLK LAVPFQWKWL YQLLDETATL VFFVLTGYKF bmy_08579T0/1-385 ---------- -----KFLL- ---------- --VLDSVP-- ---------- BACU016216/1-518 YYVLIVCYIY FTRIIAFLLK LAVPFQWKWL YQLLDEMATL VFFVLTGYKF ENSBTAP00000005512/1-556 YYVLIVCYIY FTRIIAFLLK LAVPFQWKWL YQLLDEMATL VFFVLTGYKF 551 600 ENSTTRP00000006202/1-575 RPASDNPYLQ LSQEEDDLEM ESVVTTSGVM ENMKKVKKVT NGSVEPQGEW ENSP00000361483/1-600 RPASDNPYLQ LSQEEEDLEM ESVVTTSGVM ESMKKVKKVT NGSVEPQGEW bmy_08579T0/1-385 ---------- ---------- ---------- ---------- ---------- BACU016216/1-518 RPASDNPYLQ LSQEEDDLEM ESV------- ---------- ---------- ENSBTAP00000005512/1-556 RPASDNPYLQ LSQEEDDLEM ESVVTTSGVM ENMKKVKKVT NGSVEPQADW 601 650 ENSTTRP00000006202/1-575 EGSA ENSP00000361483/1-600 EGAV bmy_08579T0/1-385 ---- BACU016216/1-518 ---- ENSBTAP00000005512/1-556 EGSA