KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 16:26:48 2014 Check: 00 ..
Name: ENSP00000331474/1-238 Len: 240 Check: 4813 Weight: 1.00
Name: ENSBTAP00000005527/1-238 Len: 240 Check: 4350 Weight: 1.00
Name: ENSTTRP00000012351/1-240 Len: 240 Check: 5911 Weight: 1.00
Name: bmy_10179T0/1-175 Len: 240 Check: 6381 Weight: 1.00
Name: BACU010809/1-240 Len: 240 Check: 7584 Weight: 1.00
//
1 50
ENSP00000331474/1-238 MESLSELQNP LLPRSPAHLH GPYPYPETPP SWSCQEKLYS YLLGGAGPAG
ENSBTAP00000005527/1-238 MESLSELQNP LLPRSPTHLH GPYPYPEASP AWPCREKIYS YLLGGAGPAH
ENSTTRP00000012351/1-240 MESLSELQNP LLPQNPAHLH GPYPYPEASP AWPCREKIYS YLLGGAGPAH
bmy_10179T0/1-175 MESLSELQNP LLPRNPAHLH GPYPYPEASP AWPCREKIYS YLLGGADPAH
BACU010809/1-240 MESLSELQNP LLPRNPAHLH GPYPYPEASP TWPSREKIYS YLLGGAGPAH
51 100
ENSP00000331474/1-238 AHQLLDPGSL QLAVEAWYRP SCLLGRDKVK EPRAGSCETS FTEDREPQEG
ENSBTAP00000005527/1-238 AHQLLDPGSL QLAVEAWYRP SCLLGRDKVK EPRAGSCETS FTEGREPPAG
ENSTTRP00000012351/1-240 AHQLLDPGSL QLAVEAWYRP NCLLGRDKLK EPRADSCETS FTESREPPAG
bmy_10179T0/1-175 AHQLLDPGSL QLAVEAWYRP NCLLGRDKVK EPRAGTCETS FTESREPPAG
BACU010809/1-240 AHQLLDPGSL QLAVEAWYRP NCLLGRDKVK EPRAGSCETS FTESREPPAG
101 150
ENSP00000331474/1-238 PPEQPTGPGQ AAENVTIQTV SYGVQEELRD QEDDQ--EEE ESDATSTESE
ENSBTAP00000005527/1-238 PTERSTEPGQ AEEDVAIQTV SYGVQEEFQG QEGDP--EEE ESDATSTESE
ENSTTRP00000012351/1-240 PTARSTEPGQ AEEDVAIQTV SYGVQEELQG QEDDQEEEEE ESDATSTESE
bmy_10179T0/1-175 PTERSTEPGQ AEEDVTIQTV SY-------- ---------- ----------
BACU010809/1-240 PTERSTEPGQ AEEDVTIQTV SYGVQEELQG QEDDQEEEEE ESDATSTESE
151 200
ENSP00000331474/1-238 SEDNFLTLPP RDHLGLTLFS MLCCFWPLGI AAFYFSQGTS KAISKGDFRL
ENSBTAP00000005527/1-238 SEDNFLTLPP RDHLGLTIFS MLCCFWPLGI AAFYFSQGTS KAISKGDFRL
ENSTTRP00000012351/1-240 SEDNFLTLPP RDHLGLTIFS MLCCFWPLGI AAFYFSQGTS KAISKGDFRL
bmy_10179T0/1-175 ---------- ---------- ---------- -------GTS KAISKGDFRL
BACU010809/1-240 SEDNFLTLPP RDHLGLTIFS MLCCFWPLGI AAFYFSQGTS KAISKGDFRL
201 250
ENSP00000331474/1-238 ASTTSRRALF LATLAIAVGA GLYVAVVVAL AAYMSQNGHG
ENSBTAP00000005527/1-238 ANTTSRRALF LATLSIAVGA GLYVAVVVAL AAYMSQNGHS
ENSTTRP00000012351/1-240 ASTTSRRALF LATLSIAIGA GLYVAVVVAL AAYMSQNGHS
bmy_10179T0/1-175 ASTTSRRALF LATLSIAIGA GLYVAVVVAL AAYMSQNGHS
BACU010809/1-240 ASTTSRRALF LATLSIAIGA GLYVAVVVAL AAYMSQNGHS