KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:26:48 2014 Check: 00 .. Name: ENSP00000269298/1-170 Len: 277 Check: 2741 Weight: 1.00 Name: BACU019686/1-240 Len: 277 Check: 9798 Weight: 1.00 Name: ENSTTRP00000009710/1-240 Len: 277 Check: 42 Weight: 1.00 Name: bmy_01735T0/1-193 Len: 277 Check: 6782 Weight: 1.00 Name: ENSBTAP00000005531/1-170 Len: 277 Check: 3045 Weight: 1.00 // 1 50 ENSP00000269298/1-170 ---------- ---------- ---------- ----MASVRI -REAKEGDC- BACU019686/1-240 ---------- --AGIGLLLP SPRRPH-RSP PLPRLSGIRI WRPLK-GRCS ENSTTRP00000009710/1-240 VRTASPTSLR RGAGIGLLLP SPRLPHPRSP PLPRLSGIRI WRPLKGSRCS bmy_01735T0/1-193 ---------- ---------- ---------- ----MASVLI -REAKEGDC- ENSBTAP00000005531/1-170 ---------- ---------- ---------- ----MAFVMI -REAKEGDC- 51 100 ENSP00000269298/1-170 ---------- ---------- ---------- --GDILRLIR ---------- BACU019686/1-240 SPGPAERKWG SWTSVPDGGD RDGFRADPRS QGGRLWKYPE ADSGEGCRPE ENSTTRP00000009710/1-240 SSGPG----- --TSVPDGGD RDGFRADPRS QGGRLWQYPE ADSGEGCGP- bmy_01735T0/1-193 ---------- ---------- ---------- --GNILRLIR ---------- ENSBTAP00000005531/1-170 ---------- ---------- ---------- --GNILRLIR ---------- 101 150 ENSP00000269298/1-170 ------ELAE FEKLSDQVKI SEE------- ---------- ------ALRA BACU019686/1-240 TGVPEGELAE YEKLSDQVKI SEE------- ---------- ------ALRA ENSTTRP00000009710/1-240 ------ELAE YEKLSDQVKI SEE------- ---------- ------ALRA bmy_01735T0/1-193 ------ELAE YEKLSDQVKI SEEVTPDWAH TQAFFLHLFV TTPVSAALRE ENSBTAP00000005531/1-170 ------ELAE YEKLSDQVKI SEE------- ---------- ------ALRA 151 200 ENSP00000269298/1-170 DGFGDNPFYH CLVAEILPAP GKLLGPCVVG YGIYYFIYST WKGRTIYLED BACU019686/1-240 DGFGENPFYH CLVAEILPVP GEPQGPCVVG YGLYYFIYST WKGRNIYLED ENSTTRP00000009710/1-240 DGFGENPFYH CLVAEILPAP GEPQGPCVVG YGLYYFIYST WKGRNIYLED bmy_01735T0/1-193 DGFGENPFYH CLVAEILPVP GEPQGPCVVG YGLYYFIYST WKGRNIYLED ENSBTAP00000005531/1-170 DGFGETPFYH CLVAEILSAP GEPQGPCVVG YGLYYFSYST WKGRNIYLED 201 250 ENSP00000269298/1-170 IYVMPEYRGQ GIGSKIIKKV AEVALDKGCS QFRLAVLDWN QRAMDLYKAL BACU019686/1-240 IYVKPEYRGQ GIGSKIIKKV AEVALDKGCS QFRLAVLDWN KGAMDLYKAL ENSTTRP00000009710/1-240 IYVKPEYRGQ GIGSKIIKKV AEVALDKGCS QLRLAVLDWN KGAMDLYKAL bmy_01735T0/1-193 IYVKPEYRGQ GIGSKIIKKV AEVALDKGCS QFRLAVLDWN KGAMDLYKAL ENSBTAP00000005531/1-170 IYVKPEYRGQ GIGSKIIKKV AEVALDKGCS QLRLAVLDWN KRAMDLYKAL 251 300 ENSP00000269298/1-170 GAQDLTEAEG WHFFCFQGEA TRKLAGK BACU019686/1-240 GAQDLTEAEG WHCFRFEGEA MRELAGK ENSTTRP00000009710/1-240 GAQDLTEAEG WHCFRFEGEA MRELAGK bmy_01735T0/1-193 GAQDLTEAEG WHCFRFEGEA MRELAGK ENSBTAP00000005531/1-170 GAQDLTEAEG WHCFRFEGEA MRELAGK