KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:26:48 2014 Check: 00 .. Name: ENSP00000369816/1-402 Len: 427 Check: 5668 Weight: 1.00 Name: ENSBTAP00000005537/1-401 Len: 427 Check: 5565 Weight: 1.00 Name: bmy_01734T0/1-425 Len: 427 Check: 8926 Weight: 1.00 Name: ENSTTRP00000009714/1-399 Len: 427 Check: 7329 Weight: 1.00 // 1 50 ENSP00000369816/1-402 ---------- ---------- ----MESRGP LATSRLLLLL LLLLLR-HTR ENSBTAP00000005537/1-401 ---------- ---------- ----MVSRGP LAIWHGL--L LLLLLPLPSH bmy_01734T0/1-425 MCDAACPHAF SSELSEAQRG PRLIMESGGP PATWHGLPLL LLLLLP-PSH ENSTTRP00000009714/1-399 ---------- ---------- ----MESGGP PATWHGLP-L LLLLLP-PSH 51 100 ENSP00000369816/1-402 QGWALRPVLP TQSAHDPPAV HLSNGPGQEP IAVMTFDLTK ITKTSSSFEV ENSBTAP00000005537/1-401 GGPALRPPLP SQTTEDSPAL HLSSGPGQEP VTIMTFNLTK ITKISSSFEF bmy_01734T0/1-425 EGRAVRHTLP RQRTQDRPAL HLSNGPGQEP VTIMTFNLTK IIKTSSSFEF ENSTTRP00000009714/1-399 EGRAVRHTLP RKRTQDRPAL HLSNGPGQEL VTIMTFNLTK IIKTSSSFEF 101 150 ENSP00000369816/1-402 RTWDPEGVIF YGDTNPKDDW FMLGLRDGRP EIQLHNHWAQ LTVGAGPRLD ENSBTAP00000005537/1-401 RTWDPEGVIF YGDTNPKNDW FMLGLRDGRP EIQLHNHWAQ LTVSAGPRLD bmy_01734T0/1-425 RTWDPEGVIF YGDTNPEDDW FVLGLRDGRP EIQLHNHWAQ LTVGAGPRLD ENSTTRP00000009714/1-399 RTWDPEGVIF YGDTNPEDDW FVLGLRDGRP EIQLHNHWAQ LTVRAGPRLD 151 200 ENSP00000369816/1-402 DGRWHQVEVK MEGDSVLLEV DGEEVLRLRQ VSGPLTSKRH PIMRIALGGL ENSBTAP00000005537/1-401 DGKWHQMEVK IHGDSLLLRV DGVEVLCLRQ VFGQQANNSQ LIMRIALGGL bmy_01734T0/1-425 DGRWHQMEVK IHGDSVMLGV DAEEMLHLRQ VSGPLANKPQ PIMRIALGGL ENSTTRP00000009714/1-399 DGRWHQMEVK IRADSVMLGL DGEEVLHLRQ VSGPLAHKPQ PIVKIVLGVL 201 250 ENSP00000369816/1-402 LFPASNLRLP LVPALDGCLR RDSWLDKQAE ISASAPTSLR SCDVESNPGI ENSBTAP00000005537/1-401 LFPASDLRLP LVPALDACLR QDDWLDQQAQ TSASVPTSVR SCAVESQPGI bmy_01734T0/1-425 LFPASKLRLP LVPALDGCLR RDDWLDQQAR TSASVPTSLR SCAVQSQPGI ENSTTRP00000009714/1-399 LFPASKLWLR LVPALDGCLR REDWLDQQAQ TSASVPTSLR SCAVESQPGI 251 300 ENSP00000369816/1-402 FLPPGTQAEF NLRDIPQPHA EPWAFSLDLG LKQAAGSGHL LALGTPENPS ENSBTAP00000005537/1-401 FFPPGTGAEF GLQEIPRPHA EPWAFSLDLA LQLAAGSGRL LALGTPENPS bmy_01734T0/1-425 FFPPGTGAAF SLQDIPRPHE EPWAFSLDLG LQLAAGSGHL LALGTPENPS ENSTTRP00000009714/1-399 FFPPGTGAEF SLEDIPWPHV EPWAFSLDLG LQLAAGSGHL LALGTPENPF 301 350 ENSP00000369816/1-402 WLSLHLQDQK VVLSSGSGPG LDLPLVLGLP LQLKLSMSRV VLSQGSKMKA ENSBTAP00000005537/1-401 WLSIHLQDQK VVLSSGSGPG LDLPLILGLR LQLNLTVSGV VLSQGAKKEI bmy_01734T0/1-425 WLSLQLQDQE VVLSSVSGPG LDLPLVLGIT LQLKLTVSRV VLSQGTKKEI ENSTTRP00000009714/1-399 WLSLHL--QK VVLSSVSGPG LDLPLILGIT LQLKLTVSKV VLSQGTKKEI 351 400 ENSP00000369816/1-402 LALPPLGLAP LLNLWAKPQG RLFLGALPGE DSSTSFCLNG LWAQGQRLDV ENSBTAP00000005537/1-401 LALPPTGPGS LLDLWVQPHG RLFLGALPGE ATSASFCLDG LWAQGRSLDM bmy_01734T0/1-425 LALPPMGPGS LLNLWAQTQG RVFLGALPGE ASSASFCLDG LWAQGQRLDM ENSTTRP00000009714/1-399 LALPPMGPAP LLNLWAQTQG RLFLEALPGE ASSASFCLDG LRAQGQRLDM 401 450 ENSP00000369816/1-402 DQALNRSHEI WTHSCPQSPG NGTDASH ENSBTAP00000005537/1-401 DRAQSRSLNI WTHSCPQNPG NGSDTTH bmy_01734T0/1-425 DRGLSRSQDI WTHSCPQSPG NGTDTT- ENSTTRP00000009714/1-399 DRALSRSQDI WTHSCPQSPG NGTNYHY