KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:26:49 2014 Check: 00 .. Name: bmy_03969T0/1-184 Len: 278 Check: 4830 Weight: 1.00 Name: ENSBTAP00000005543/1-274 Len: 278 Check: 8963 Weight: 1.00 Name: ENSTTRP00000014254/1-278 Len: 278 Check: 513 Weight: 1.00 Name: ENSP00000280187/1-278 Len: 278 Check: 4894 Weight: 1.00 Name: BACU013310/1-211 Len: 278 Check: 8472 Weight: 1.00 // 1 50 bmy_03969T0/1-184 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000005543/1-274 ----MEEGQT QKGCFECCIK CLGGIPYASL IATILLYAGV ALFCGCGHEA ENSTTRP00000014254/1-278 MEENMEEGQT QKGCFECCIK CLGGIPYASL IATILLYAGV ALFCGCGHEA ENSP00000280187/1-278 MEENMEEGQT QKGCFECCIK CLGGIPYASL IATILLYAGV ALFCGCGHEA BACU013310/1-211 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_03969T0/1-184 ---------- ---------- --MLTMMMLA YFQVIY---- ---------- ENSBTAP00000005543/1-274 LSGTVNILQT YFEMARTAGD TLDVFTMIDI FKYVIYGIAA AFFVYGILLM ENSTTRP00000014254/1-278 LSGTVNILQT YFEMARTAGD TLDVFTMIDI FKYVIYGIAA AFFVYGILLM ENSP00000280187/1-278 LSGTVNILQT YFEMARTAGD TLDVFTMIDI FKYVIYGIAA AFFVYGILLM BACU013310/1-211 ---------- ---MARTAGD TLDVFTMIDI FKYVIYGVAA AFFVYGILLM 101 150 bmy_03969T0/1-184 ---IITCGTL KSL----KIN S-KDVFTSNF IMLTYLFMLA WLGVTAFTSL ENSBTAP00000005543/1-274 VEGFFTTGAI KDLYGDFKIT TCGRCVSAWF IMLTYLFMLA WLGVTAFTSL ENSTTRP00000014254/1-278 VEGFFTTGAI KDLYGDFKIT TCGRCVSAWF IMLTYLFMLA WLGVTAFTSL ENSP00000280187/1-278 VEGFFTTGAI KDLYGDFKIT TCGRCVSAWF IMLTYLFMLA WLGVTAFTSL BACU013310/1-211 VEGFFTTGAI KDLYGDFKIT TCGRCVSAWF IMLTYLFMLA WLGVTAFTSL 151 200 bmy_03969T0/1-184 PVYMYFNLWT ICRNTTLVEG ANLCLDLRQF GIVTIGEEKK ICTVSENFLR ENSBTAP00000005543/1-274 PVYMYFNLWT ICRNTTLVEG ANLCLDLRQF GRSSLGKEIL MCSVYESILR ENSTTRP00000014254/1-278 PVYMYFNLWT ICRNTTLVEG ANLCLDLRQF GIVTIGEEKK ICTVSENFLR ENSP00000280187/1-278 PVYMYFNLWT ICRNTTLVEG ANLCLDLRQF GIVTIGEEKK ICTVSENFLR BACU013310/1-211 PVYMYFNLWT ICRNTTLVEG ANLCLDLRQF GIVTVGEEKK ICTVSENFLR 201 250 bmy_03969T0/1-184 MCESTELNMT FHLFIVALAG AGAAVIAMVH YLMVLSANWA YVKDACRMQK ENSBTAP00000005543/1-274 IRESSLLRPS FHVFLLLLVG KSGPILARVH YLMVLSANWA YVKDACRMQK ENSTTRP00000014254/1-278 MCESTEXXXX XXXXXXXXXX XXXXXXXXVH YLMVLSANWA YVKDACRMQK ENSP00000280187/1-278 MCESTELNMT FHLFIVALAG AGAAVIAMVH YLMVLSANWA YVKDACRMQK BACU013310/1-211 MCESTELNMT FHLFIVALAG AGAAVIAMVH YLMVLSANWA YVKDACRMQK 251 300 bmy_03969T0/1-184 YEDIKSKEEQ ELHDIHSTRS KERLNAYT ENSBTAP00000005543/1-274 YEDIKSKEEQ ELHDIHSTRS KERLNAYT ENSTTRP00000014254/1-278 YEDIKSKEEQ ELHDIHSTRS KERLNAYT ENSP00000280187/1-278 YEDIKSKEEQ ELHDIHSTRS KERLNAYT BACU013310/1-211 YEDIKSKEEQ ELHEECCKVS FKMI----