KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 16:26:49 2014  Check: 00 ..

 Name: ENSBTAP00000005544/1-157  Len:    172  Check:  4317  Weight:  1.00
 Name: bmy_05629T0/1-164         Len:    172  Check:  429  Weight:  1.00
 Name: ENSP00000324775/1-156     Len:    172  Check:  1486  Weight:  1.00
 Name: BACU002446/1-156          Len:    172  Check:  987  Weight:  1.00
 Name: ENSTTRP00000016398/1-154  Len:    172  Check:  4277  Weight:  1.00

//


                          1                                                   50
ENSBTAP00000005544/1-157  ARGRG---RG KGIIWSEQPA AVQSQPLASA CLTLLSPDPQ PSTAPPKPKP 
bmy_05629T0/1-164         MFGLSECLLR PGPLSAP--- ---SQPLASA WLILLSPDPQ PSTAPPKPKP 
ENSP00000324775/1-156     MAGWP----G AGPLCVL-GG AALGVCLAGV AGQLV----E PSTAPPKPKP 
BACU002446/1-156          MAGQR---LG AGPLWALGGG AALGVCLAGV AGQLV----E PSTAPPKPKP 
ENSTTRP00000016398/1-154  MAGQR---LG AGPLWAL-GG AALGVCLAGV AGQLV----E PSTAPPKPKP 


                          51                                                 100
ENSBTAP00000005544/1-157  PPLTKETVVF WDMRLWHVVG IFSLFVLSI- ------IITL CCVFNCRVPR 
bmy_05629T0/1-164         PPLTKETVVF WDMRLWHVVG IFSLFVLSIT CSVLPXVITL CCVFNCRVPR 
ENSP00000324775/1-156     PPLTKETVVF WDMRLWHVVG IFSLFVLSI- ------IITL CCVFNCRVPR 
BACU002446/1-156          PPLTKETVVF WDMRLWHVVG IFSLFVLSI- ------IITL CCVFNCRVPR 
ENSTTRP00000016398/1-154  PPLTKETVVF WDMRLWHVVG IFSLFVLSI- ------IITL CCVFNCRVPR 


                          101                                                150
ENSBTAP00000005544/1-157  TRKEIEARYL QRKAAKKSLE --DSFTPVEP FSFYSTEE-- -KKKKKKDSV 
bmy_05629T0/1-164         TRKEIEARYL QRKAAKMYTD KLETVPPLNE LTEIPGED-- RKKKKKKDSV 
ENSP00000324775/1-156     TRKEIEARYL QRKAAKMYTD KLETVPPLNE LTEVPGEDKK KKKKKKKDSV 
BACU002446/1-156          TRKEIEARYL QRKAAKMYTD KLETVPPLNE LTEIPGED-- KKKKKKKDSV 
ENSTTRP00000016398/1-154  TRKEIEARYL QRKAAKIYTD KLETVPPLDE LTEVPGGD-- -KKKKKKDSV 


                          151                                                200
ENSBTAP00000005544/1-157  DTVAIKVEED EKNEAKKKKG EK 
bmy_05629T0/1-164         DTVAIKVEED EKNEAKKKKE EK 
ENSP00000324775/1-156     DTVAIKVEED EKNEAKKKKG EK 
BACU002446/1-156          DTVAIKVEED EKNEAKKKKE EK 
ENSTTRP00000016398/1-154  DTVAIKVEED EKNEAKKKKE EK