KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:26:49 2014 Check: 00 .. Name: ENSP00000401932/1-228 Len: 577 Check: 4103 Weight: 1.00 Name: BACU002444/1-571 Len: 577 Check: 5681 Weight: 1.00 Name: ENSBTAP00000005550/1-316 Len: 577 Check: 1455 Weight: 1.00 Name: bmy_05626T0/1-286 Len: 577 Check: 8815 Weight: 1.00 Name: ENSTTRP00000016400/1-259 Len: 577 Check: 2802 Weight: 1.00 // 1 50 ENSP00000401932/1-228 ---------- ---------- ---------- ---------- ---------- BACU002444/1-571 MASPGGPRSL LVWLLLLQRW LREAPAGSCY RYSVMMGDRS VYGESSGLVV ENSBTAP00000005550/1-316 ---------- ---------- ---------- ---------- ---------- bmy_05626T0/1-286 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016400/1-259 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000401932/1-228 ---------- ---------- ---------- ---------- ---------- BACU002444/1-571 PISRVVVHPQ FSTRGTVKYD LALLWLFYPV NFTGVIQPVC IPEKTFQVEA ENSBTAP00000005550/1-316 ---------M AASLSRLSAG LAASRPLG-- ---------- ---------- bmy_05626T0/1-286 ---------- ---------- ---MWPLY-- ---------- ---------- ENSTTRP00000016400/1-259 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000401932/1-228 ---------- ---------- ---------- ---------- ---------- BACU002444/1-571 GTRCWVTGWG KQQEFGGPFV SVFLREMDQC IIYYEECNGM VQKAMPTDKD ENSBTAP00000005550/1-316 ---------- ---------- ---------- ---------- ---------- bmy_05626T0/1-286 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016400/1-259 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000401932/1-228 ---------- ---------- ---------- ---------- ---------- BACU002444/1-571 VVLEGMICGY NSIGKDSCQE AELSILRYER CNEVLKEKME SRFDVVKKGA ENSBTAP00000005550/1-316 ---------- ---------- ---------- ---------- ---------- bmy_05626T0/1-286 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016400/1-259 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000401932/1-228 ---------- ---------- ---------- ---------- ---------- BACU002444/1-571 ICGTSPTGKD ACQGDSGGPL VCQLNDSWVQ VGIVSWGIGC GRRGYPGVFT ENSBTAP00000005550/1-316 ---------- ---------- ---LSRSFLL LVLLLLNSGY KGDSTKP--- bmy_05626T0/1-286 ---------- ---------- ---LPVTLV- ---------- -----PE--- ENSTTRP00000016400/1-259 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000401932/1-228 ---------- ---------- ---------- ---------- ---------- BACU002444/1-571 ELADSVNYSS YIQPVCLPEK KFEVKAGTQC WAIGWGRTLE FACGKPWWPK ENSBTAP00000005550/1-316 ---------- ---------- ---------- ---------- -ACGQPWWPK bmy_05626T0/1-286 ---------- ---------- ---------- ---------- -ACGKPWWRK ENSTTRP00000016400/1-259 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000401932/1-228 ---MTRHWPW EVSLRMENEH VCGGALIDPS WVVTAAHCIQ GTKEYSVVLG BACU002444/1-571 NLDVTRHWPW EVSLRVENEH VCGGALIDLD WVVTAAHCIQ GTKEYSVILG ENSBTAP00000005550/1-316 NLDLSRHWPW EVSLRVGNEH VCGGALIDLK WVVTAAHCIQ GTKEYSVILG bmy_05626T0/1-286 NLDVTRHWPW EVSLRVENEH VCGGALIDLD WVVTAAHCIQ GTKEYSVILG ENSTTRP00000016400/1-259 ---VTRHWPW EVSLRVENEH VCGGALIDLD WVVTAAHCIQ GTKEYSVILD 351 400 ENSP00000401932/1-228 TSKLQPMNFS RALWVPVRDI IMHPKYWGRA FIMGDVALVH LQTPVTFSS- BACU002444/1-571 TSKLKPTDST RALSIPVRDV IMHPKYWGRN FITGDVALLQ LHTPVVVSKY ENSBTAP00000005550/1-316 TSKLKPPNST RTLLIPVRDI IMHPKYWGRT FIMGDVALLQ LYNPVIISKY bmy_05626T0/1-286 TSKLKPTDST RALSIPVRDI IMHPKYWGRN FITGDVALLQ LHTPVVVSKY ENSTTRP00000016400/1-259 TFKLKPTDST RALLIPVRDL ITHPKYWG-N FIAGDVALLQ LHTPVVVSKY 401 450 ENSP00000401932/1-228 ---------- ---------- ---------- -TANSMLTPE LQEAEVFIMD BACU002444/1-571 VQPICLPEPN YNLKVGTQCW VTGWGQVKQR FSANSTLTPE LREAEVFIMD ENSBTAP00000005550/1-316 VQPICLPEPN YSLKVGTQCW VTGWGQVKQR FSANSTLASE LQEAEVFIMD bmy_05626T0/1-286 VQPICLPEPN YNLKVGTQCW VTGWGQVKQR FSANSTLTPE LREAEVFIMD ENSTTRP00000016400/1-259 VQPICLPEPN YNLKVGTQCW VTGWGQVKQC FSANSTLTPA LREAEVFIMD 451 500 ENSP00000401932/1-228 NKRCDRHY-K KSFFPPVVPL VLGDMICATN YGENLCYGDS GGPLACEVEG BACU002444/1-571 NKMCDRIYRK KSLIPRVVPL VLGDMICATN YGENLCYGNS GSSLVCQVNH ENSBTAP00000005550/1-316 NKKCDQIYRK KSHIPRVVPL VLGDMICATN YREDLCSGDS GGPLACEVEG bmy_05626T0/1-286 NKMCDRIYRK KSLIPRVVPL VLGDMICATN YGENLCYGDS GGPLACEVEG ENSTTRP00000016400/1-259 NKICDRIYRK KSLIPRVVPL VLGDMICATN YGENLCYGDP GGPLACEVED 501 550 ENSP00000401932/1-228 RWILAGVLSW EKACVKAQNP GVYTRITKYT KWIKKQMSN- --------GA BACU002444/1-571 TWIQMGVLSW SFSCSRRCFP GIYTSTSYFT DWIKKQISDM RFVSRARPDF ENSBTAP00000005550/1-316 RWILAGVLSW EKACAKVRNP GVYTRITKYS RWIKKQISN- --------GI bmy_05626T0/1-286 RWILAGVLSW EKACAQVRNP GVYTHITKYS KWIKKQISN- --------GV ENSTTRP00000016400/1-259 TWILAGVLSW EKA-AQVHNP GVYTRITKYS KWIKKQISN- --------GV 551 600 ENSP00000401932/1-228 FSGPCASACL LFLC----WL LQPQMGS BACU002444/1-571 LSLVFLTGYI LLVSLGSLWL L------ ENSBTAP00000005550/1-316 LSVPCTSAWL LLLF----WL LQPQMGP bmy_05626T0/1-286 LSVPCTSSWL LLLS----WL LQPQMGP ENSTTRP00000016400/1-259 LSVLCTSSWL LLLS----WL LQPQMGP