KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:26:50 2014 Check: 00 .. Name: ENSP00000364512/1-355 Len: 355 Check: 9689 Weight: 1.00 Name: ENSBTAP00000005552/1-355 Len: 355 Check: 1522 Weight: 1.00 Name: ENSTTRP00000005782/1-355 Len: 355 Check: 368 Weight: 1.00 Name: bmy_15947T0/1-339 Len: 355 Check: 7455 Weight: 1.00 Name: BACU019117/1-355 Len: 355 Check: 889 Weight: 1.00 // 1 50 ENSP00000364512/1-355 MDFLHRNGVL IIQHLQKDYR AYYTFLNFMS NVGDPRNIFF IYFPLCFQFN ENSBTAP00000005552/1-355 MDFLHRNGVL VIQHLQKDYR AYYNFLNFMS NVGDPRNIFS IYFPLWFQLN ENSTTRP00000005782/1-355 MDFFHRNGVL IIQHLQKDYR AYYSFLNFMS NVGDPRNIFS IYFPLWFQLN bmy_15947T0/1-339 MDFLHRNGVL IIQHLQKDYR AYYSFLNFMS NVGDPRNIFS IYFPLWFQLN BACU019117/1-355 MDFLHRNGVL IIQHLQKDYR AYYSFLNFMS NVGDPRNIFS IYFPLWFQLN 51 100 ENSP00000364512/1-355 QTVGTKMIWV AVIGDWLNLI FKWILFGHRP YWWVQETQIY PNHSSPCLEQ ENSBTAP00000005552/1-355 QTVGTKMIWV AVIGDWFNLI FKWILFGHRP YWWVQETQIY PNHSSPCLEQ ENSTTRP00000005782/1-355 QAVGTKMIWV AVVGDWFNLI FKWILFGHRP YWWVQETQIY PNHSSPCLEQ bmy_15947T0/1-339 QAVGTKMIWV AVVGDWFNLI FKWILFGHRP YWWVQETQIY PNHSSPCLEQ BACU019117/1-355 QAVGTKMIWV AVVGDWFNLI FKWILFGHRP YWWVQETQIY PNHSSPCLEQ 101 150 ENSP00000364512/1-355 FPTTCETGPG SPSGHAMGAS CVWYVMVTAA LSHTVCGMDK FSITLHRLTW ENSBTAP00000005552/1-355 FPTTCETGPG SPSGHAMGSS CVWYVMVTAA LSHTVSQMDK SFITLHRLTW ENSTTRP00000005782/1-355 FPTTCETGPG SPSGHAMGSS CVWYVMVTAA LGHTISRMDK SFPTLHRLTW bmy_15947T0/1-339 FPTTCETGPG SPSGHAMGSS CVWYVMVTAA LGHTISRMDK SFTTLH---- BACU019117/1-355 FPTTCETGPG SPSGHAMGSS CVWYVMVTAA LGHTISRMDK SFTTLHRLTW 151 200 ENSP00000364512/1-355 SFLWSVFWLI QISVCISRVF IATHFPHQVI LGVIGGMLVA EAFEHTPGIQ ENSBTAP00000005552/1-355 SFLWSLFWLI QINVCISRVF IATHFPHQVI LGVIGGVLVA EIFEYTPGIQ ENSTTRP00000005782/1-355 SFLWSLFWLI QISVCISRVF IATHFPHQVI LGVIGGMLVA EAFEHTPRIQ bmy_15947T0/1-339 ---------- --SVCISRVF IATHFPHQVI LGVIGGMLVA EAFEHTPRIZ BACU019117/1-355 SFLWSLFWLI QISVCISRVF IATHFPHQVI LGVIGGMLVA EAFEHTPRIQ 201 250 ENSP00000364512/1-355 TASLGTYLKT NLFLFLFAVG FYLLLRVLNI DLLWSVPIAK KWCANPDWIH ENSBTAP00000005552/1-355 TASLSVYLKT NLFLFLFALG FYLLLRHLDI DLLWSVPIAK KWCANPDWIH ENSTTRP00000005782/1-355 TASLSTYLKT NLFLFLFALG FYLLLRLLDI DLLWSVPIAK KWCANPDWIH bmy_15947T0/1-339 TASLSTYLKT NLFLFLFALG FYLLLRLLDI DLLWSVPIAK KWCANPDWIH BACU019117/1-355 TASLSTYLKT NLFLFLFALG FYLLLRLLDI DLLWSVPIAK KWCANPDWIH 251 300 ENSP00000364512/1-355 IDTTPFAGLV RNLGVLFGLG FAINSEMFLL SCRGGNNYTL SFRLLCALTS ENSBTAP00000005552/1-355 IDTTPFAGLV RNLGVLFGLG FAINSEMFLR SCRGENGYGL SFRLLCALVS ENSTTRP00000005782/1-355 IDTTPFAGLV RNLGVLFGLG FAINSEMFLR SCRGENGYRL SFRLLCTLAS bmy_15947T0/1-339 IDTTPFAGLV RNLGVLFGLG FAINSEMFLR SCRGENGYRL SFRLLCTLAS BACU019117/1-355 IDTTPFAGLV RNLGVLFGWG FAINSEMFLR SCRGENGYRL SFRLLCTLAS 301 350 ENSP00000364512/1-355 LTILQLYHFL QIPTHEEHLF YVLSFCKSAS IPLTVVAFIP YSVHMLMKQS ENSBTAP00000005552/1-355 LTTLQLYHFI KIPTDTEYLF YVLSFCKSAS IPLTVVALIP YCIHMLMKPS ENSTTRP00000005782/1-355 LTTLQLYHFV KIPTHTEYLF YMLSFCKSAS IPLTVVALIP YCIHMLMKPS bmy_15947T0/1-339 LTTLQLYHFI KIPTHTEYLF YVLSFCKSAS IPLTVVALIP YCIHMLMKPS BACU019117/1-355 LTTLQLYHFI KIPTHTEYLF YVLSFCKSAS IPLTVVALIP YCIHMLMKPS 351 400 ENSP00000364512/1-355 GKKSQ ENSBTAP00000005552/1-355 AKKLN ENSTTRP00000005782/1-355 EKKIN bmy_15947T0/1-339 EKKIH BACU019117/1-355 EKKIH