KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:26:55 2014 Check: 00 .. Name: ENSP00000290902/1-331 Len: 340 Check: 9335 Weight: 1.00 Name: ENSBTAP00000005582/1-332 Len: 340 Check: 2389 Weight: 1.00 Name: BACU009121/1-284 Len: 340 Check: 1030 Weight: 1.00 Name: bmy_12250T0/1-331 Len: 340 Check: 7325 Weight: 1.00 Name: ENSTTRP00000009450/1-331 Len: 340 Check: 6951 Weight: 1.00 // 1 50 ENSP00000290902/1-331 --------ME NPSPAAALGK ALCALLLATL GA-AGQPLGG ESICSARALA ENSBTAP00000005582/1-332 --------MG APHPVFPRGA ALWAFLLASL GSVAGQPLGA EPMCTAQPLA BACU009121/1-284 MEASSVKVMG TLRSAAAWGG ALWALLLATR GCSAGQPLGG EPMCTAQPPA bmy_12250T0/1-331 --------MG TLRSAAAWGG ALWALLLATL GCSAGQPLGG EPTCTAQPLA ENSTTRP00000009450/1-331 --------MR NPDQTAPLGR ALWALLLATL GCSAGQPLGG ESMCTAQPLA 51 100 ENSP00000290902/1-331 KYSITFTGKW SQTAFPKQYP LFRPPAQWSS LLGAAHSSDY SMWRKNQYVS ENSBTAP00000005582/1-332 RYSITFTGKW SQASFPKQYP LFRPPAQWSS LLGAAHSSDY SLWRKDQYVS BACU009121/1-284 KYSITFTGKW SQASFPKQYP MFRPPAQWSS LLGAAHSPDY SLWKKGQYVS bmy_12250T0/1-331 KYSITFTGKW SQASFPKQYP MFRPPAQWSS LLGAAHSPDY SLWRKGQYVS ENSTTRP00000009450/1-331 KYSITFTGKW SQASFPKQYP LFRPPAQWSS LLRAAHSPDY SLWRKGQYVS 101 150 ENSP00000290902/1-331 NGLRDFAERG EAWALMKEIE AAGEALQSVH AVFSAPAVPS GTGQTSAELE ENSBTAP00000005582/1-332 NGLREFAERG EAWALMREME AAGERLQSVH GVFSAPAVPS GTGQTSSELE BACU009121/1-284 NGLRDFAERG EAWALMREMQ AAGEKLQSVH GVFSGPAVPS GTGQTSAEFE bmy_12250T0/1-331 NGLRDFAERG EAWALMREME AAGEKLQSVH GVFSGPAVPS GTGQTSAEFE ENSTTRP00000009450/1-331 NGLRDFAERS EAWALMREME AAGEKLQSVH GVFSAPAVPS GTGQTSAEFE 151 200 ENSP00000290902/1-331 VQRRHSLVSF VVRIVPSPDW FVGVDSLDLC DGDRWREQAA LDLYPYDAGT ENSBTAP00000005582/1-332 AHSRHSLVSF VVRIVPSPDW FVGVDSLDLC DGGSWREQVA VDLHPYDAGT BACU009121/1-284 AHSRHSLVSF VVRIVPSPDW FVGVNSLDLC DGGRWREQVA VDLHPYDAGT bmy_12250T0/1-331 AHSRHSLVSF VVRIVPSPDW FVGVNSLDLC DGGRWREQVA VDLHPYDAGT ENSTTRP00000009450/1-331 AHSRHSLVSF VVRIVPSPDW FVGIDSLDLC DGGRWREQVV VDLHPYDAGT 201 250 ENSP00000290902/1-331 DSGFTFSSPN FATIPQDTVT EITSSSPSHP ANSFYYPRLK ALPPIARVTL ENSBTAP00000005582/1-332 DSGFTFSSPN FATVPQDTVT EITASSPSHP ANSFYYPRLK ALPPIAKVTL BACU009121/1-284 DSGFTFSSPK FATVPQDTVT EITASSPSHP ANSFYYPRLK SLPPIATVTL bmy_12250T0/1-331 DSGFTFSSPK FATVPQDTVT EITASSPSHP ANSFYYPRLK SLPPIATVTL ENSTTRP00000009450/1-331 DSGFTFSSPK FATVPQDTVT EITASSPSHP ANSFYYPRLK SLPPIATVTL 251 300 ENSP00000290902/1-331 VRLRQSPRAF IPPAPVLPSR DNEIVDSASV PETPLDCEVS LWSSWGLCGG ENSBTAP00000005582/1-332 VRLRQSPRAF VPPALDLGVG GNEIVDSLPD PETPLDCEVS LWSSWGLCAG BACU009121/1-284 ARTAPGPP-- -RPPRAWGAG ATRS------ ---PTACQVS ---------- bmy_12250T0/1-331 ARLPHSPRAF -PPAPGLGGG GNEVADSLPA PETPLDCEVS LWSSWGLCAG ENSTTRP00000009450/1-331 ARLPHSPRAF -PPAPGFGGG GNEVADSLPA PETPLDCEVS LWSSWGLCAG 301 350 ENSP00000290902/1-331 HCGRLGTKSR TRYVRVQPAN NGSPCPELEE EAECVPDNCV ENSBTAP00000005582/1-332 PCGRPGAKSR TRYVRVRPAN HGAPCPPLEE EAPCDPDNCV BACU009121/1-284 PARSPP---- ---------- ---------- ---------- bmy_12250T0/1-331 PCGQPGAKSR TRYVRARPAN HGAPCPGLEE EAPCVPDNCV ENSTTRP00000009450/1-331 PCGRPGAKSR TRYVRARPAN HGAPCPGLEE EAPCVPDNCV