KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:26:56 2014 Check: 00 .. Name: ENSTTRP00000011551/1-483 Len: 578 Check: 9981 Weight: 1.00 Name: bmy_08502T0/1-551 Len: 578 Check: 8372 Weight: 1.00 Name: BACU010194/1-527 Len: 578 Check: 3196 Weight: 1.00 Name: ENSP00000263576/1-483 Len: 578 Check: 7108 Weight: 1.00 Name: ENSBTAP00000005587/1-483 Len: 578 Check: 6579 Weight: 1.00 // 1 50 ENSTTRP00000011551/1-483 ---------- ---------- ---------- ---------- ---------- bmy_08502T0/1-551 WGAGRPLQPA PSCADPALLP RLLPPPRSSG ACAWWLVGPP TPRKPIGRWV BACU010194/1-527 MGNVVHLHGK CSSKSR---- ---------- ---------- ---------- ENSP00000263576/1-483 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000005587/1-483 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000011551/1-483 ---------- ---------- --MASLLWGG DAGAAES--- ERLNGHFSNV bmy_08502T0/1-551 RPGTTWRLWR PHVLGAEAAI AVMASLLWGG DAGAAES--- ERLNGHFSNV BACU010194/1-527 ---------- ------ECRL DAEICLMFPN LVTISPPPTR QNLGPAFSNV ENSP00000263576/1-483 ---------- ---------- --MASLLWGG DAGAAES--- ERLNSHFSNL ENSBTAP00000005587/1-483 ---------- ---------- --MASLLWGG DAGAAES--- ERLNGHFSNL 101 150 ENSTTRP00000011551/1-483 IHPRKNLQGI KSTTVTNVDG SVNNTEEDGE EDG------- ---------- bmy_08502T0/1-551 IHPRKNLRGI KSPTVPNVDG SVNNTEEDDE EDG------- ---------- BACU010194/1-527 IHPWKNLRGI KSPTVPNVDG SVNNTEEDDE EDGAGKEKLG LLAIDVGLVE ENSP00000263576/1-483 SQPRKNLWGI KSTAVRNIDG SINNINEDDE EDV------- ---------- ENSBTAP00000005587/1-483 IHPQNHLLGI KSATIPNIDG SVNRIEEDDE DDV------- ---------- 151 200 ENSTTRP00000011551/1-483 --VELAANSL LNKLIRQSLV ESSHRVEVLQ KDPSSPLYSV KTFEELRLKE bmy_08502T0/1-551 --VELAANSL LNKLIRQSLV ESSHRVEVLQ KDPSSPLYSV KTFEELRLKE BACU010194/1-527 VRVELAANSL LNKLIRQSLV ESSHRVEVLQ KDPSSPLYSV KTFEELRLKE ENSP00000263576/1-483 --VDLAANSL LNKLIHQSLV ESSHRVEVLQ KDPSSPLYSV KTFEELRLKE ENSBTAP00000005587/1-483 --VDLAANSL LNKLIRQSLV ESSHRVEVLQ KDPSSPLYSV KTFEELRLKE 201 250 ENSTTRP00000011551/1-483 ELLKGIYAMG FNRPSKIQEM ALPMMLAHPP QNLIAQSQSG TGKTAAFVLA bmy_08502T0/1-551 ELLKGIYAMG FNRPSKIQEM ALPMMLAHPP QNLIAQSQSG TGKTAAFVLA BACU010194/1-527 ELLKGIYAMG FNRPSKIQEM ALPMMLAHPP QNLIAQSQSG TGKTAAFVLA ENSP00000263576/1-483 ELLKGIYAMG FNRPSKIQEM ALPMMLAHPP QNLIAQSQSG TGKTAAFVLA ENSBTAP00000005587/1-483 ELLKGIYAMG FNRPSKIQEM ALPMMLAHPP QNLIAQSQSG TGKTAAFVLA 251 300 ENSTTRP00000011551/1-483 MLSRVNALEL FPQXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_08502T0/1-551 MLSRVNALEL FPQCLCLAPT YELALQTGRV VERMGKFCVD VQVMYAVRGN BACU010194/1-527 MLSRVNALEL FPQCLCLAPT YELALQTGRV VERMGKFCVD VQVMYAVRGN ENSP00000263576/1-483 MLSRVNALEL FPQCLCLAPT YELALQTGRV VEQMGKFCVD VQVMYAIRGN ENSBTAP00000005587/1-483 MLSRVNALKL FPQCLCLAPT YELALQTGRV VERMGKFCVD VQVMYAIRGN 301 350 ENSTTRP00000011551/1-483 XXPRGTHVTK QIIIGTPGTV LDWCFKQKLI DLTKIRVFVL DEADVMIDTQ bmy_08502T0/1-551 RIARGTDVTK QIIIGTPGTV LDWCFKQKLI DLTKIRVFVL DEADVMIDTQ BACU010194/1-527 RIARGTDVTK QIIIGTPGTV LDWCFKQKLI DLTKIRVFVL DEADVMIDTQ ENSP00000263576/1-483 RIPRGTDITK QIIIGTPGTV LDWCFKLKLI DLTKIRVFVL DEADVMIDTQ ENSBTAP00000005587/1-483 RIPRGTDVTK QIVIGTPGTV LDWCFKRKLI DLTKIRVFVL DEADVMIDTQ 351 400 ENSTTRP00000011551/1-483 GFSDQSIRIQ RALPSECQML LFSATFEDSV WQFAERIIPD PNIIKLRKEE bmy_08502T0/1-551 GFSDQSIRIQ RALPSKCQML LFSATFEDSV WQFAERIIPD PNVIKLRKEE BACU010194/1-527 GFSDQSIRIQ RALPSKCQML LFSATFEDSV WQFAERIIPD PNVIKLRKEE ENSP00000263576/1-483 GFSDHSIRIQ RALPSECQML LFSATFEDSV WHFAERIIPD PNVIKLRKEE ENSBTAP00000005587/1-483 GFADQSIRIQ RALPSECQML LFSATFEDSV WQFAERIIPD PNVIKLRKEE 401 450 ENSTTRP00000011551/1-483 LTLNNIRQYY VLCRDRKDKY QALCNIYGGI TIGQAIIFCQ TRQNAKWLTV bmy_08502T0/1-551 LTLNNIRQYY VLCRSRKDKY QALCNIYGGI TVGQAIIFCQ TRQNAKWLTV BACU010194/1-527 LTLNNIRQYY VLCRSRKDKY QALCNIYGGI TVGQAIIFCQ TRQNARWLTV ENSP00000263576/1-483 LTLNNIRQYY VLCEHRKDKY QALCNIYGSI TIGQAIIFCQ TRRNAKWLTV ENSBTAP00000005587/1-483 LTLNNIRQYY VLCGNRKDKY QALCNIYGGI TIGQAIIFCQ TRRNAKWLTV 451 500 ENSTTRP00000011551/1-483 EMMQDGHQVS LLSGELTVDQ RASVIQRFRD GKEKVLVTTN VCAR-GIDVK bmy_08502T0/1-551 EMMQDGHQVS LLSGELTVDQ RASLCP---- -EEKVAGPCS VVPLPGIDVK BACU010194/1-527 EMMQDGHQVS LLSGELTVDQ RASVIQRFRD GKEKVLITTN VCAR-GIDVK ENSP00000263576/1-483 EMIQDGHQVS LLSGELTVEQ RASIIQRFRD GKEKVLITTN VCAR-GIDVK ENSBTAP00000005587/1-483 EMMQDGHQVS LLSGELTVDQ RASIIQRFRD GKEKVLITTN VCAR-GIDVK 501 550 ENSTTRP00000011551/1-483 QVTIVVNFDL PVNPAEEPDY ETYLHRIGRT GRFGKKGLAF NMIEVDKLPL bmy_08502T0/1-551 QVTIVVNFDL PVNRAEEPDY ETYLHRIGRT GRFGKKGLAF NMIEVDKLPL BACU010194/1-527 QVTIVVNFDL PVNQAEEPDY ETYLHRIGRT GRFGKKGLAF NMVEVDKLPL ENSP00000263576/1-483 QVTIVVNFDL PVKQGEEPDY ETYLHRIGRT GRFGKKGLAF NMIEVDELPS ENSBTAP00000005587/1-483 QVTIVVNFDL PVNQAEEPDY ETYLHRIGRT GRFGKKGLAF NMIEVDKLPL 551 600 ENSTTRP00000011551/1-483 LMKIQDHFNS NIKQLNPEDL DEIENIEY bmy_08502T0/1-551 LMKIQDHFNS NIKQLDPEDM DEIEKIEY BACU010194/1-527 LMRIQDHFNS NIKQLDPEDM DEIEKIEY ENSP00000263576/1-483 LMKIQDHFNS SIKQLNAEDM DEIEKIDY ENSBTAP00000005587/1-483 LMKIQDHFSE NIKQLDPEDM DEIEKIEY