KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 4 Type: P Thu May 15 16:26:57 2014 Check: 00 ..
Name: BACU014322/1-340 Len: 572 Check: 6109 Weight: 1.00
Name: ENSP00000356832/1-526 Len: 572 Check: 1319 Weight: 1.00
Name: bmy_05951T0/1-463 Len: 572 Check: 7486 Weight: 1.00
Name: ENSBTAP00000005592/1-431 Len: 572 Check: 4436 Weight: 1.00
//
1 50
BACU014322/1-340 ---------- ---------- ---------- ---------- ----------
ENSP00000356832/1-526 MVNKDMNGFP VKKCSAFQFF KKRVRRWIKS PMVSVDKHQS PSLKYTGSSM
bmy_05951T0/1-463 ---------- ---------- ---------- ---------- ----------
ENSBTAP00000005592/1-431 ---------- ---------- ---------- ---------- ----------
51 100
BACU014322/1-340 ---------- ---------- ---------- ---------- ----------
ENSP00000356832/1-526 VHIPPGEPDF ESSLCQTCLG EHAFQRGVLP QENESCSWET QSGCEVREPC
bmy_05951T0/1-463 ---------- ---------- ---------- -------MKQ EA---IKSPL
ENSBTAP00000005592/1-431 ---------- ---------- ---------- -----MTVKT EA---ARDTL
101 150
BACU014322/1-340 ---------- ---------- ---------- ---------- ---------M
ENSP00000356832/1-526 NHANILTKPD PRTFWTNDDP AFMKQRRMGL NDFIQKIANN SYACKHPEVQ
bmy_05951T0/1-463 K--------- ---------- AFMKQRRMGL NDFIQKIANN SYACKHPEVQ
ENSBTAP00000005592/1-431 TYSRMRGMVA ILI------- AFMKQRRMGL NDFIQKIANN SYACKHPEVQ
151 200
BACU014322/1-340 LILHL----- ---------- -PGCEQENDF E--------- --FKF-----
ENSP00000356832/1-526 SILKISQPQE PELMNANPSP PPSPSQQINL GPSSNPHAKP SDFHFLKVIG
bmy_05951T0/1-463 SILKISQPQE PELMNANPSP PPSPSQQINL GPSSNPHAKP SDFHFLKVIG
ENSBTAP00000005592/1-431 SILKISPPQE PELMNANPSP PPSPSQQINL GPSSNPHAKP SDFHFLKVIG
201 250
BACU014322/1-340 -----QVLLA RHKAEEAFYA VKVLQKKAIL KKKEEKHIMS ERNVLLKNVK
ENSP00000356832/1-526 KGSFGKVLLA RHKAEEVFYA VKVLQKKAIL KKKEEKHIMS ERNVLLKNVK
bmy_05951T0/1-463 KGSFGKVLLA RHKAEEAFYA VKVLQKKAIL KKKEEKHIMS ERNVLLKNVK
ENSBTAP00000005592/1-431 KGSFGKVLLA RHKAEEAFYA VKVLQKKAIL KKKEEKHIMS ERNVLLKNVK
251 300
BACU014322/1-340 HPFLVGLHFS FQTADKLYFV LDYINGGELF YHLQRERCFL EPRARFYAAE
ENSP00000356832/1-526 HPFLVGLHFS FQTADKLYFV LDYINGGELF YHLQRERCFL EPRARFYAAE
bmy_05951T0/1-463 HPFLVGLHFS FQTADKLYFV LDYINGGELF YHLQRERCFL EPRARFYAAE
ENSBTAP00000005592/1-431 HPFLVGLHFS FQTADKLYFV LDYINGGELF YHLQRERCFL EPRARFYAAE
301 350
BACU014322/1-340 IASALGYLHS LNIVYRDLKP ENILLDSQGH IVLTDFGLCK ENIEHNGTTS
ENSP00000356832/1-526 IASALGYLHS LNIVYRDLKP ENILLDSQGH IVLTDFGLCK ENIEHNSTTS
bmy_05951T0/1-463 IASALGYLHS LNIVYRDLKP ENILLDSQGH IVLTDFGLCK ENIEHNGTTS
ENSBTAP00000005592/1-431 IASALGYLHS LNIVYRDLKP ENILLDSQGH IVLTDFGLCK ENIEHNGTTS
351 400
BACU014322/1-340 TFCGTPEYLA PEVLHKQPYD RTVDWWCLGA VLYEMLYGL- ----------
ENSP00000356832/1-526 TFCGTPEYLA PEVLHKQPYD RTVDWWCLGA VLYEMLYGL- ----------
bmy_05951T0/1-463 TFCGTPEYLA PEVLHKQPYD RTVDWWCLGA VLYEMLYGLV SSPLKIVEDC
ENSBTAP00000005592/1-431 TFCGTPEYLA PEVLHKQPYD RTVDWWCLGA VLYEMLYGL- ----------
401 450
BACU014322/1-340 ---------- ---------- ---------- -----PPFYS RNTAEMYDNI
ENSP00000356832/1-526 ---------- ---------- ---------- -----PPFYS RNTAEMYDNI
bmy_05951T0/1-463 PGSIHFSLEC SRKNPDLSGH TSPIADLIIT SCPLSPPFYS RNTAEMYDNI
ENSBTAP00000005592/1-431 ---------- ---------- ---------- -----PPFYS RNTAEMYDNI
451 500
BACU014322/1-340 LNKPLQLKPN ITNSARHVLE GLLQKDRTKR LGAKDDFMEI KNHVFFSLIN
ENSP00000356832/1-526 LNKPLQLKPN ITNSARHLLE GLLQKDRTKR LGAKDDFMEI KSHVFFSLIN
bmy_05951T0/1-463 LNKPLQLKPN ITNSARHVLE GLLQKDRTKR LGAKDDFMEI KNHVFFSLIN
ENSBTAP00000005592/1-431 LNKPLQLKPN ITNSARHVLE GLLQKDRTKR LGAKDDFMEI KNHVFFSLIN
501 550
BACU014322/1-340 WDDLINKKIT PPFNPNVSGP SDLRHFDPEF TEEPVPNSIG RSPDSILLTA
ENSP00000356832/1-526 WDDLINKKIT PPFNPNVSGP NDLRHFDPEF TEEPVPNSIG KSPDSVLVTA
bmy_05951T0/1-463 WDDLINKKIT PPFNPNVSGP SDLRHFDPEF TEEPVPNSIG RSPDSILLTA
ENSBTAP00000005592/1-431 WEDLINKKIT PPFNPNVSGP SDLRHFDPEF TEEPVPNSIG RSPDSLLLTA
551 600
BACU014322/1-340 SVKEAAEAFL GFSYAPPVDS FL
ENSP00000356832/1-526 SVKEAAEAFL GFSYAPPTDS FL
bmy_05951T0/1-463 SVKEAAEAFL GFSYAPPMDS FL
ENSBTAP00000005592/1-431 SVKEAAEAFL GFSYAPPMDS FL