KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:27:02 2014 Check: 00 .. Name: ENSTTRP00000012440/1-495 Len: 530 Check: 6737 Weight: 1.00 Name: bmy_10756T0/1-331 Len: 530 Check: 8120 Weight: 1.00 Name: BACU007511/1-439 Len: 530 Check: 3047 Weight: 1.00 Name: ENSP00000341524/1-434 Len: 530 Check: 7525 Weight: 1.00 Name: ENSBTAP00000005629/1-427 Len: 530 Check: 8462 Weight: 1.00 // 1 50 ENSTTRP00000012440/1-495 CRESRNARGR GKRRVKSAPF PHPTSEGWAI EERLEPRGGP SLAPPPTGLG bmy_10756T0/1-331 ---------- ---------- ---------- ---------- ---------- BACU007511/1-439 ---------- ---------- ---------- ---------- ---------- ENSP00000341524/1-434 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000005629/1-427 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000012440/1-495 RARSVTLSLC RRSSTVSCAE APVAEAPVAA LAEAGAMAAT DIA------- bmy_10756T0/1-331 ---------- ---------- ---------- ---------- ---------- BACU007511/1-439 ---------- ---------- ---------- ------MEAE EISGSPEDSW ENSP00000341524/1-434 ---------- ---------- ---------- ------MAAT DIA------- ENSBTAP00000005629/1-427 ---------- ---------- ---------- ------MAAT DIA------- 101 150 ENSTTRP00000012440/1-495 ---RQAGEGC RTVPLAGHVG FDSLPDQLVN QSVSQGFCFN ILCVGETGLG bmy_10756T0/1-331 ---------- -FLKWSGH-- ---------- ---------- ---------- BACU007511/1-439 AFIQRPGEGC RTVPLAGHVG FDSLPDQLVN KSVSQGFCFN ILCVGETGLG ENSP00000341524/1-434 ---RQVGEGC RTVPLAGHVG FDSLPDQLVN KSVSQGFCFN ILCVGETGLG ENSBTAP00000005629/1-427 ---RQVGEGC RTVPLAGHVG FDSLPDQLVN KSVSQGFCFN ILCVGETGLG 151 200 ENSTTRP00000012440/1-495 KSTLMDTLFN TKFEGEPATH TQPGVQLQSN TYDLQESNVG LKLTIVSTVG bmy_10756T0/1-331 ---------- ---------- ---------- ---------- -----FPTLS BACU007511/1-439 KSTLMDTLFN TKFEGEPATH TQPGVQLRSN TYDLQEGNVG LKLTIVSTVG ENSP00000341524/1-434 KSTLMDTLFN TKFEGEPATH TQPGVQLQSN TYDLQESNVR LKLTIVSTVG ENSBTAP00000005629/1-427 KSTLMDTLFN TKFEGEPATH TQPGVQLRSN TYDLQESNVG LKLTIVSTVG 201 250 ENSTTRP00000012440/1-495 FGDQINKEDX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_10756T0/1-331 F--------S YKPIVEFIDA QFEAYLQEEL KIRRVLHTYH DSRIHACLYF BACU007511/1-439 FGDQINKEDS YKPIVEFIDA QFEAYLQEEL KILRVLHNYH DSRIHACLYF ENSP00000341524/1-434 FGDQINKEDS YKPIVEFIDA QFEAYLQEEL KIRRVLHTYH DSRIHVCLYF ENSBTAP00000005629/1-427 FGDQINKEDS YKPIVEFIDA QFEAYLQEEL KIRRVLHTYH DSRIHACLYF 251 300 ENSTTRP00000012440/1-495 XXXXXXXXKS LDLVTMKKLD SKVNVIPIIA KSDAISKSEL TKFKIKITSE bmy_10756T0/1-331 IAPTGHSLKS LDLVTMKKLD SKVNIIPIIA KSDAISKSEL TKFKIKITSE BACU007511/1-439 IAPTGHSLKS LDLVTMKKLD SKVNIIPIIA KSDAISKSEL TKFKIKITSE ENSP00000341524/1-434 IAPTGHSLKS LDLVTMKKLD SKVNIIPIIA KADAISKSEL TKFKIKITSE ENSBTAP00000005629/1-427 IAPTGHSLKS LDLVTMKKLD SKVNIIPIIA KSDAISKSEL TKFKIKITSE 301 350 ENSTTRP00000012440/1-495 LVSNGVQI-- ---------- ------AHLP FAVIGSTEEL KIGNKMVKAR bmy_10756T0/1-331 LVSNGVQIYQ FPTDDESVAE INGTMNAHLP FAVIGSTEEL KIGNKMMKAR BACU007511/1-439 LVSNGVQIYQ FPTDDESVAE INGTMNAHLP FAVIGSTEEL KIGNKMMKAR ENSP00000341524/1-434 LVSNGVQIYQ FPTDDESVAE INGTMNAHLP FAVIGSTEEL KIGNKMMRAR ENSBTAP00000005629/1-427 LVNNGVQIYQ FPTDDESVAE INGTMNAHLP FAVIGSTEEL KIGNKMMKAR 351 400 ENSTTRP00000012440/1-495 QYPWGTVQVE NEAHCDFVKL REMLIRVNME DLREQTHSRH YELYRRCKLE bmy_10756T0/1-331 QYPWGTVQVE NEAHCDFVKL REMLIRINME DLREQTHSRH YELYRRCKLE BACU007511/1-439 QYPWGTVQVE NEAHCDFVKL REMLIRINME DLREQTHSRH YELYRRCKLE ENSP00000341524/1-434 QYPWGTVQVE NEAHCDFVKL REMLIRVNME DLREQTHTRH YELYRRCKLE ENSBTAP00000005629/1-427 QYPWGTVQVE NEAHCDFVKL REMLIRVNME DLREQTHSRH YELYRRCKLE 401 450 ENSTTRP00000012440/1-495 EMGFKDTDPD SKPFSLQETY EAKRNEFLGE LQKKEEEMRQ MFVQRVKEKE bmy_10756T0/1-331 EMGFKDTDPD SKPFSLQETY EAKRNEFLGE LQKKEEEMRQ MFVQRVKEKE BACU007511/1-439 EMGFKDTDPD SKPFSLQETY EAKRNEFLGE LQKKEEEMRQ MFVQRVKEKE ENSP00000341524/1-434 EMGFKDTDPD SKPFSLQETY EAKRNEFLGE LQKKEEEMRQ MFVQRVKEKE ENSBTAP00000005629/1-427 EMGFKDTDPD SKPFSLQETY EAKRNEFLGE LQKKEEEMRQ MFVQRVKEKE 451 500 ENSTTRP00000012440/1-495 AELKEAEKEL HEKFDRLKKL HQDEKKKLED KKKSLDDEVN AFKQRKTAAE bmy_10756T0/1-331 AELKEAEKEL HEKFDRLKKL HQDEKKKLED KKKSLDDEVN AFKQRKTAAE BACU007511/1-439 AELKEAEKEL HEKFDRLKKL HQDEKKKLED KKKLLDDEVN AFKQRKTAAE ENSP00000341524/1-434 AELKEAEKEL HEKFDRLKKL HQDEKKKLED KKKSLDDEVN AFKQRKTAAE ENSBTAP00000005629/1-427 AELKEAEKEL HEKFDRLKKL HQDEKKKLED KKKSLDDEVN AFKQRKTAAE 501 550 ENSTTRP00000012440/1-495 LLQSQGSQAG GSQTLKRDKE KKN------- bmy_10756T0/1-331 LLQSQGSQAG GAQTLKRDKE KKNLGFL--- BACU007511/1-439 LLQSQGSQAG GAQTLKRDKE KKN--FF--- ENSP00000341524/1-434 LLQSQGSQAG GSQTLKRDKE KKNNPWLCTE ENSBTAP00000005629/1-427 LLQSQGSQAG GSQTLKRDKE KKN-------