KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:27:03 2014 Check: 00 .. Name: ENSP00000306524/1-796 Len: 796 Check: 5144 Weight: 1.00 Name: ENSTTRP00000009623/1-795 Len: 796 Check: 9733 Weight: 1.00 Name: ENSBTAP00000005636/1-796 Len: 796 Check: 6347 Weight: 1.00 Name: bmy_11778T0/1-795 Len: 796 Check: 884 Weight: 1.00 Name: BACU019842/1-795 Len: 796 Check: 431 Weight: 1.00 // 1 50 ENSP00000306524/1-796 MIPVAEFKQF TEQQPAFKVL KPWWDVLAEY LTVAMLMIGV FGCTLQVTQD ENSTTRP00000009623/1-795 MIPVAEFKQF AEHQPNFKVL KPWWDVLAEY LTVAMLMIGV FGCTLQVTQD ENSBTAP00000005636/1-796 MIPVAEFKQF TEQQPAFKVL KPWWDVLAEY LTVAMLMIGV FGCTLQVTQD bmy_11778T0/1-795 MIPVAELKQF AEQQPAFKVL KPWWDVLAEY LTVAMLMIGV FGCTLQVTQD BACU019842/1-795 MIPVAEFKQF AEQQPAFKVL KPWWDVLAEY LTVAMLMIGV FGCTLQVTQD 51 100 ENSP00000306524/1-796 KIICLPNHEL QENLSEAPCQ QLLPRGIPEQ IGALQEVKGL KNNLDLQQYS ENSTTRP00000009623/1-795 KIICLPSHGP RENLSEASCW QLLLRGVSEH VGDLQELSGL RNNLDLQQYS ENSBTAP00000005636/1-796 KIICLPSHEP RENLSEAPCQ QLLPRGISEP MGDLRELSGL KNNLDLQQYS bmy_11778T0/1-795 KIICLPSHEP RENLSEAPCQ QLLPRGVSEH MGDLRELSGL RNNLDLQQYS BACU019842/1-795 KIICLPSHEP RENSSEAPCQ QLLPRGVSEH MGDLRELSGL RNNLDLQQYS 101 150 ENSP00000306524/1-796 FINQLCYETA LHWYAKYFPY LVVIHTLIFM VCTSFWFKFP GTSSKIEHFI ENSTTRP00000009623/1-795 FINQLCYETA LHWYAKYFPY LVVIHTLNFM VCTSFWFKFP GTSSKIEHFI ENSBTAP00000005636/1-796 FINQLCYETA LHWYAKYFPY LVVIHTLIFM VCTSFWFKFP GTSSKIEHFI bmy_11778T0/1-795 FINQLCYETA LHWYAKYFPY LVVIHTLIFM VCTSFWFKFP STSSKIEHFI BACU019842/1-795 FINQLCYETA LHWYAKYFPY LVVIHTLIFM VCTSFWFKFP STSSKIEHFI 151 200 ENSP00000306524/1-796 SILGKCFDSP WTTRALSEVS GENQKGPAAT ERAAATIVAM AGTGPGKAGE ENSTTRP00000009623/1-795 SILGKCFDSP WTTRALSEVS GENHKDPAAA GRATVTMAA- AAAGPGKAGE ENSBTAP00000005636/1-796 SILGKCFDSP WTTRALSEVS GENHKGPAAT TAGRATVTVT TTAGPGKAGE bmy_11778T0/1-795 SILGKCFDSP WTTRALSEVS GENHKNPAAT RRAMVTMAA- AAAGPGKAGE BACU019842/1-795 SILGKCFDSP WTTRALSEVS GENHKNPAAA RRAMVTMAA- AAAGPGKAGE 201 250 ENSP00000306524/1-796 GEKEKVLAEP EKVVTEPPVV TLLDKKEGEQ AKALFEKVKK FRMHVEEGDI ENSTTRP00000009623/1-795 GEKEKMLAEP EKVVTEPPAV TLLDKKEGEQ AKALFEKVKK FRMHVEEGDI ENSBTAP00000005636/1-796 GEKEKVLPEP EKVVTEPPAV TLLDKKEGEQ AKALFEKVKK FRVHVEEGDI bmy_11778T0/1-795 GEKEKVLAEP EKVVTEPPAV TLLDKKEGEQ AKALFEKVKK FRMHVEEGDI BACU019842/1-795 GEKEKVLAEP EKVVTEPPAV TLLDKKEGEQ AKALFEKVKK FRMHVEEGDI 251 300 ENSP00000306524/1-796 LYTMYIRQTV LKVCKFLAIL VYNLVYVEKI SFLVACRVET SEVTGYASFC ENSTTRP00000009623/1-795 LYTMYIRQTV LKVCKFLAIL VYNLVYVGKI SFLVACTVDT SEVTGYASFC ENSBTAP00000005636/1-796 LYTMYIRQTV LKVCKFLAIL VYNLVYVGKI SFLVACRVET SEVTGYASFC bmy_11778T0/1-795 LYTMYIRQTV LKVCKFLAIL VYNLVYVGKI SFLVTCRVET SEVTGYASFC BACU019842/1-795 LYTMYIRQTV LKVCKFLAIL VYNLVYVGKI SFLVACRVET SEVTGYVSFC 301 350 ENSP00000306524/1-796 CNHTKAHLFS KLAFCYISFV CIYGLTCIYT LYWLFHRPLK EYSFRSVREE ENSTTRP00000009623/1-795 CSHTKAHLFS KLAFCYICFV CVYGIICFYT LFWLFHRPLK EYSFRSVREE ENSBTAP00000005636/1-796 CNHTKAHLFS KLAFCYISFV CVYGITCLYT LYWLFHRPLK EYSFRSVREE bmy_11778T0/1-795 CNHTKAHLFS KLAFCYISFV CVYGITCFYT LCWLFHRPLK EYSFRSVREE BACU019842/1-795 CNHTKAHLFS KLAFCYISFV CVYGITCFYT LCWLFHRPLK EYSFRSVREE 351 400 ENSP00000306524/1-796 TGMGDIPDVK NDFAFMLHLI DQYDSLYSKR FAVFLSEVSE SRLKQLNLNH ENSTTRP00000009623/1-795 TGMGDIPDVK NDFAFMLHLI DQYDSLYSKR FAVFLSEVSE SRLKQLNLNH ENSBTAP00000005636/1-796 TGMGDIPDVK NDFAFMLHLI DQYDSLYSKR FAVFLSEVSE SRLKQLNLNH bmy_11778T0/1-795 TGMGDIPDVK NDFAFMLHLI DQYDSLYSKR FAVFLSEVSE SRLKQLNLNH BACU019842/1-795 TGMGDIPDVK NDFAFMLHLI DQYDSLYSKR FAVFLSEVSE SRLKQLNLNH 401 450 ENSP00000306524/1-796 EWTPEKLRQK LQRNAAGRLE LALCMLPGLP DTVFELSEVE SLRLEAICDI ENSTTRP00000009623/1-795 EWTTEKLRQK LQRNACGRLE LALCMLPGLP DTVFELSEVE ALRLEAICDV ENSBTAP00000005636/1-796 EWTAEKLRQK LQRNARGRLE LALCMLPGLP DTVFELSEVE ALRLEAIGDI bmy_11778T0/1-795 EWTTEKLRQK LQRNAWGRLE LALCMLPGLP DTVFELSEVE ALRLEAICDI BACU019842/1-795 EWTTEKLRQK LQRNAWGRLE LALCMLPGLP DTVFELSEVE ALRLEAICDI 451 500 ENSP00000306524/1-796 TFPPGLSQLV HLQELSLLHS PARLPFSLQV FLRDHLKVMR VKCEELREVP ENSTTRP00000009623/1-795 TFPPGLSQLV HLQEISLLHS PARLPFSSQI FLRDHLKVIW VKCEELREVP ENSBTAP00000005636/1-796 TFPPGLSQLV HLQELSLLHS PARLPFSSQI FLRDRLKVIR IKCEELREVP bmy_11778T0/1-795 TFPPGLAQLV HLQELSLLHS PARLPFSLQI FLRDHLKVIR VKCEELREVP BACU019842/1-795 TFPPGLAQLV HLQELSLLHS PARLPFSLQI FLRDHLKVIR VKCEELREVP 501 550 ENSP00000306524/1-796 LWVFGLRGLE ELHLEGLFPQ ELARAATLES LRELKQLKVL SLRSNAGKVP ENSTTRP00000009623/1-795 LWVFGLRSLE ELHLEGVFPP ELARAANLES LRELKQLKVL SLRSNAGKVP ENSBTAP00000005636/1-796 LWVFGLRGLE ELHLEGLFPP ELARAATLES LRELKQLKVL SLRSNAGKVP bmy_11778T0/1-795 LWVFGLRGLE ELHLEGLFPL DLARAATLES LRELKQLKVL SLQSNAGKVP BACU019842/1-795 LWVFGLRGLE ELHLEGLFPP DLARAATLES LRELKQLKVL SLQSNAGKVP 551 600 ENSP00000306524/1-796 ASVTDVAGHL QRLSLHNDGA RLVALNSLKK LAALRELELV ACGLERIPHA ENSTTRP00000009623/1-795 ASVTDVAGHL QRLSLHNDGA RLLALNSLKK LAVLRELELV ACGLERIPHA ENSBTAP00000005636/1-796 ASVTDVAGHL QRLSLHNDGA RLLALNSLKK LAALRELELV ACGLERIPHA bmy_11778T0/1-795 ASVTDVAGHL QRLSLHNDGA RLLALNSLKK LVVLRELELV ACGLERIPHA BACU019842/1-795 ASVTDVASHL QRLSLHNDGA RLLALNSLKK LVVLRELELV ACGLERIPHA 601 650 ENSP00000306524/1-796 VFSLGALQEL DLKDNHLRSI EEILSFQHCR KLVTLRLWHN QIAYVPEHVR ENSTTRP00000009623/1-795 IFSLSALQEL DLKDNHLRSI EEILSFQHCR KLVTLRLWHN QIAYVPEHIR ENSBTAP00000005636/1-796 VFSLGALQEL DLRDNHLRSI EEILSFQHCR KLLTLRLWHN QIAYVPEHVR bmy_11778T0/1-795 VFSLGALQEL DLKDNHLRSI EEILSFQHCR KLVTLRLWHN RIAYIPEHVR BACU019842/1-795 IFSLGALQEL DLKDNHLRSI EEILSFQHCR KLVTLRLWHN QIAYVPEHVR 651 700 ENSP00000306524/1-796 KLRSLEQLYL SYNKLETLPS QLGLCSGLRL LDVSHNGLHS LPPEVGLLQN ENSTTRP00000009623/1-795 KLRGLEQLYL SHNKLETLPT QLGMCSGLRL LDISHNGLHS LPAELGLLQN ENSBTAP00000005636/1-796 KLRGLEQLYL SHNKLETLPT QLGMCSSLRL LDVSHNGLHS LPAELGLLQN bmy_11778T0/1-795 KLRGLEQLYL SHNKLETLPT QLGMCYGLRL LDVSHNGLHS LPAELGLLQN BACU019842/1-795 KLRGLEQLYL SHNKLETLPT QLGMCSGLRL LDVSHNGLHS LPAELGLLQN 701 750 ENSP00000306524/1-796 LQHLALSYNA LEALPEELFF CRKLRTLLLG DNQLSQLSPH VGALRALSRL ENSTTRP00000009623/1-795 LQHLAVSYNA LELLPDELFF CRKLRTLLLG YNNLSQLSPQ VGALGALSRL ENSBTAP00000005636/1-796 LQHLALSYNA LEFLPDELFF CRKLRTLLLG YNHLSQLAPQ VGALRALSRL bmy_11778T0/1-795 LQHLALSYNA LELLPDELFF CRKLRTLLLG YNNLSQLSPQ VGALRALSRL BACU019842/1-795 LQLLALSYNA LELLPDELFF CRKLRTLLLG YNQLSQLSPQ VGALRALSRL 751 800 ENSP00000306524/1-796 ELKGNRLEAL PEELGNCGGL KKAGLLVEDT LYQGLPAEVR DKMEEE ENSTTRP00000009623/1-795 ELKGNRLEAL PEELGNCGGL KKSGLLVEDT LYEGLPAEVR DRMEVE ENSBTAP00000005636/1-796 ELKGNRLEAL PEELGNCGGL KKSGLLVEDT LYDGLPAEVR DRMEAE bmy_11778T0/1-795 ELKGNRLEAL PEELGNCGGL KKSGLLVEDT LYEGLPAEVR DRMEVE BACU019842/1-795 ELKGNRLEAL PEELGNCGGL KKSGLLVEDT LYKGLPAEVR DRMEVE