KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 16:27:03 2014  Check: 00 ..

 Name: ENSBTAP00000005642/1-202  Len:    235  Check:  3846  Weight:  1.00
 Name: ENSP00000356529/1-202     Len:    235  Check:  3261  Weight:  1.00
 Name: ENSTTRP00000007222/1-199  Len:    235  Check:  8911  Weight:  1.00
 Name: bmy_10498T0/1-230         Len:    235  Check:  5050  Weight:  1.00
 Name: BACU005797/1-197          Len:    235  Check:  3602  Weight:  1.00

//


                          1                                                   50
ENSBTAP00000005642/1-202  ---------- ---------- ---------- ---MCRTLAA FPTSCLERAK 
ENSP00000356529/1-202     ---------- ---------- ---------- ---MCRTLAA FPTTCLERAK 
ENSTTRP00000007222/1-199  ---------- ---------- ---------- ---MCRTLAA FPTNCLERAK 
bmy_10498T0/1-230         QALAAAALPP RALRCPLEPV TILHTTCCPA PAAMCRTLAA FPTTCLERAK 
BACU005797/1-197          ---------- ---------- ---------- ---MCRTLAA FPTTCLERAK 


                          51                                                 100
ENSBTAP00000005642/1-202  EFKTRLGIFL HKSELGSDTG SVGKFEWGSK HSKEGKNFSE DVLGWKESFD 
ENSP00000356529/1-202     EFKTRLGIFL HKSELGCDTG STGKFEWGSK HSKENRNFSE DVLGWRESFD 
ENSTTRP00000007222/1-199  EFKTRLGVFL HKSELGSGTG SVGKFQWDSK HSKEGRNFSK DVLGWRESFD 
bmy_10498T0/1-230         EFKTRLGIFL HKSELGSGTG SVGKFEWDSK HSKEGRNFSE DVLGWRESFD 
BACU005797/1-197          EFKTRLGIFL HKSELGSGTG SVGKFEWDSK HRKEGRNFSE DVLGWRESFD 


                          101                                                150
ENSBTAP00000005642/1-202  LLLSSKNGVA AFHAFLKTEF SEENLEFWLA CEEFKKLRSA TKLGSRAHRI 
ENSP00000356529/1-202     LLLSSKNGVA AFHAFLKTEF SEENLEFWLA CEEFKKIRSA TKLASRAHQI 
ENSTTRP00000007222/1-199  LLLSSKNGVA AFHAFLKTEF SEENLEFWLA CEEFRKLRSA TKLASRAHRI 
bmy_10498T0/1-230         LLLSSRNGVA AFHAFLKTEF SEENLEFWLA CEEFKKLRSA TKLASQAHRI 
BACU005797/1-197          LLLSSKNGVA AFHAFLKTEF SEENLEFWLA CEEFKKLRSA TKLASRAHRI 


                          151                                                200
ENSBTAP00000005642/1-202  FEEFICSEAP KEVNIDHETR ELTRTNLQAA TAVCFDAAQW KVRALMEKDS 
ENSP00000356529/1-202     FEEFICSEAP KEVNIDHETH ELTRMNLQTA TATCFDAAQG KTRTLMEKDS 
ENSTTRP00000007222/1-199  FEEFICSEAP KEVNIDHETR ELTRTNLQTP TAMCFDVAQG KTRTLMEKDS 
bmy_10498T0/1-230         FEEFICSEAP KEVNIDHETR ELXRTNLQTP TATCFDVAQG KTRTLMEKDS 
BACU005797/1-197          FEEFICSEAP KEVNIDHETR ELTRTNLQTP TAMCFDVAQG KTRTLMEKDS 


                          201                                                250
ENSBTAP00000005642/1-202  YPRFLKSPAY RDLATQATAA SASPSSSSPA EPLHT 
ENSP00000356529/1-202     YPRFLKSPAY RDLAAQASAA SATLSSCSLD EPSHT 
ENSTTRP00000007222/1-199  YPRFLKSPAY RDLAAEAAAA SA---SASPS EPSHT 
bmy_10498T0/1-230         YPRFLKSPAY RDLAAQAAAA SA-----SPS EPSHT 
BACU005797/1-197          YPRFLKSPAY RDLAAQAAAA SA-----SPS EPSHT