KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:27:06 2014 Check: 00 .. Name: bmy_15431T0/1-332 Len: 335 Check: 8396 Weight: 1.00 Name: ENSP00000358909/1-322 Len: 335 Check: 8552 Weight: 1.00 Name: ENSBTAP00000005659/1-325 Len: 335 Check: 7311 Weight: 1.00 Name: BACU012357/1-306 Len: 335 Check: 4256 Weight: 1.00 Name: ENSTTRP00000011968/1-322 Len: 335 Check: 635 Weight: 1.00 // 1 50 bmy_15431T0/1-332 ---MEADLSG FNIDAPRWDQ CTFLGRVKHF FNVTDPRTVL VPEWELDWAK ENSP00000358909/1-322 ---MEADLSG FNIDAPRWDQ RTFLGRVKHF LNITDPRTVF VSERELDWAK ENSBTAP00000005659/1-325 MGRMEADLSD FNIDAPRWDQ CTFLGRVKHF FNITDPRTVL VPERELDWAK BACU012357/1-306 ---MEADLSG FNIDAPRWDQ CTFLGRVKHF FNVTDPRTVL VPEWELDWAK ENSTTRP00000011968/1-322 ---MEADLSG FNIDAPRWDQ CTFLGRVKHF FNVTDPRTVL VPEWELDWAK 51 100 bmy_15431T0/1-332 VMVEKSRMGT VPPGTRVEQL LYAKKLYDSA FHPDTGDKMN VIGRMSFQVP ENSP00000358909/1-322 VMVEKSRMGV VPPGTQVEQL LYAKKLYDSA FHPDTGEKMN VIGRMSFQLP ENSBTAP00000005659/1-325 VMVEQSRMGT VPPGTQVEQL FYAKKLYDSA FHPDTGHKMN VIGRMSFQVP BACU012357/1-306 VMVEKSRMGT VPPGTRVEQL LYAKKLYDSA FHPDTGDKMN VIGRMSFQVP ENSTTRP00000011968/1-322 VMVEKSRMGT VPPGTRVEQL LYAKKLYDSA FHPDTGDKMN VIGRMSFQVP 101 150 bmy_15431T0/1-332 GGMIITGFML QFYRTIPAVI FWQWVNQSFN ALVNYTNRNA ASPTSVRQMA ENSP00000358909/1-322 GGMIITGFML QFYRTMPAVI FWQWVNQSFN ALVNYTNRNA ASPTSVRQMA ENSBTAP00000005659/1-325 GGMIITGFML QFYRTMPAVI FWQWVNQSFN ALVNYTNRNA ASPTSVRQMA BACU012357/1-306 GGMIITGFML QFYRTIPAVT FWQWVNQSFN ALVNYTNRNA ASPTSVRQMA ENSTTRP00000011968/1-322 GGMIITGFML QFYRTIPAVI FWQWVNQSFN ALVNYTNRNA ASPTSVRQMA 151 200 bmy_15431T0/1-332 VSYITATTAA VATAVGMNML TKRAPPLVGR WVPFAAVAAA NCVNIPMMRQ ENSP00000358909/1-322 LSYFTATTTA VATAVGMNML TKKAPPLVGR WVPFAAVAAA NCVNIPMMRQ ENSBTAP00000005659/1-325 VSYITATTTA VATAVGMNML TKRAPPLVGR WVPFAAVAAA NCVNIPMMRQ BACU012357/1-306 VSYITATTAA VTTAVGMNML TKRAPPLVGR WVPFAAVAAA NCVNIPMMRQ ENSTTRP00000011968/1-322 VSYVTATTAA VATAVGMNTL TKRAPPLVGR WVPFAAVAAA NCVNIPMMRQ 201 250 bmy_15431T0/1-332 QELIQGICVK DRNHSEIGHS RRAAAIGITQ VVISRITMAA PGMSKMGKPS ENSP00000358909/1-322 QELIKGICVK DRNENEIGHS RRAAAIGITQ VVISRITMSA PGMILLPVIM ENSBTAP00000005659/1-325 QELIQGICVK DRNHNEIGHS RRAAAIGITQ VVISRITMAA PGMILLPVLM BACU012357/1-306 QELIQGICVK DRNHNEIGHS RRAAAIGITQ VVISRITMAA PGMILLPVVM ENSTTRP00000011968/1-322 QELIQGICVK DRNHNEIGHS RRAAAIGITQ VVISRITMAA PGMILLPVVM 251 300 bmy_15431T0/1-332 HPGGPWNNPA AGXHGKAGET ALHEENPGAA CPIAGSAVRV FVSIIFSRFG ENSP00000358909/1-322 -------ERL EKLHFMQKVK VLHAP---LQ VMLSGCFLIF MVPVACGLFP ENSBTAP00000005659/1-325 -------ERL EKLRFVQRVR VLHAP---LQ VLLSGCFLIF MVPVACGLFP BACU012357/1-306 -------ERL EKLRCMKRIR VLHAP---LQ VLLSGCF--- ---------- ENSTTRP00000011968/1-322 -------ERL EKLRCMKRIR VLHAP---LQ VLLSGCFLIF MVPVACGLFP 301 350 bmy_15431T0/1-332 GLCELPVSYL EPELQDTIKA KCGEPVPYVY FNKGL ENSP00000358909/1-322 QKCELPVSYL EPKLQDTIKA KYGELEPYVY FNKGL ENSBTAP00000005659/1-325 QQCELPVSYL EPELQDTIKA KYREPVPHVY FNKGL BACU012357/1-306 ---ELPVSYL EPELQDTIKA KCGEPVPYVY FNKGL ENSTTRP00000011968/1-322 QKCELPVSYL EPELQDTIKA EYGEPVPYVY FNKGL