KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:27:06 2014 Check: 00 .. Name: BACU019136/1-360 Len: 360 Check: 3348 Weight: 1.00 Name: ENSTTRP00000005876/1-356 Len: 360 Check: 9728 Weight: 1.00 Name: ENSBTAP00000005667/1-351 Len: 360 Check: 5360 Weight: 1.00 Name: bmy_11050T0/1-299 Len: 360 Check: 1983 Weight: 1.00 Name: ENSP00000264249/1-356 Len: 360 Check: 6209 Weight: 1.00 // 1 50 BACU019136/1-360 MHHQWLLLAT CFWVIFMFMV ASKFITLTFK DPDAYSAKQE FLFLTTAPDA ENSTTRP00000005876/1-356 MHHQWLLLAT CFWVIFMFMV ASKFITLTFK DPDAYSAKQE FLFLTAAPDA ENSBTAP00000005667/1-351 MHHQWLLLAA CFWVILMFMV ASKFITLTFK DPDAYSAKQE FLFLTAVPDA bmy_11050T0/1-299 ---------- -MW------- ---------- ---------- -----TRPK- ENSP00000264249/1-356 MHHQWLLLAA CFWVIFMFMV ASKFITLTFK DPDVYSAKQE FLFLTTMPEV 51 100 BACU019136/1-360 GRSLRETHFP EELKLTGKVL PGGRLVQPLV YTQRLELVRN VCREDTLRNL ENSTTRP00000005876/1-356 GRSLRETHFP EELKLTGNML AGGRLVQPLV YMQRLELVRN VCREDTLRNL ENSBTAP00000005667/1-351 GRLPGETHFP EELKPTGKM- ----LVEPLV YAQRLELMRN VCREDALRNL bmy_11050T0/1-299 ---------- ---KLTGKML PGGRLVQPLV YMQRLELVRN VCREDTLRNL ENSP00000264249/1-356 RKLPEEKHIP EELKPTGKEL PDSQLVQPLV YMERLELIRN VCRDDALKNL 101 150 BACU019136/1-360 SHTAVSRFVL DRIFVCDKHK ILFCQTPKVG NTQWKKVLIV LNGLSLVAAT ENSTTRP00000005876/1-356 SHTAVSKFVL DRIFVCDKHE ILFCQTPKVG NTQWKKVLIV LNXXXXXXXX ENSBTAP00000005667/1-351 SHTAVSKFVL DRIFVCDKHK ILFCQTPKVG NTQWKKVLIV LNGAFPSIEE bmy_11050T0/1-299 SHTAVSKFVL DRIFVCDKHK ILFCQTPKVG NTQWKKVLIV LNGAFPSIEE ENSP00000264249/1-356 SHTPVSKFVL DRIFVCDKHK ILFCQTPKVG NTQWKKVLIV LNGAFSSIEE 151 200 BACU019136/1-360 APAITLHSSS QPTASTTSSI RLTSSSSFFS LSLKTYFKFF IVRDPFERLI ENSTTRP00000005876/1-356 XXXXXXXXXX XXXXXXXXXX ----XXXXXX XXLKTYFKFF IVRDPFERLI ENSBTAP00000005667/1-351 IPENVVHDHE KNGLPRLSSF ----SEAEIQ KRLKTYFKFF IVRDPFERLI bmy_11050T0/1-299 IPESVVHDHE KNGLPRLSSF ----SDAEVQ KRLKTYFKFF IVRDPFERLI ENSP00000264249/1-356 IPENVVHDHE KNGLPRLSSF ----SDAEIQ KRLKTYFKFF IVRDPFERLI 201 250 BACU019136/1-360 SAFKDKFVHN PRFEPWYRHE IAPGIIRKYR RNRTETRGIQ FEDFVRYLGD ENSTTRP00000005876/1-356 SAFKDKFVHN PRFEPWYRHE IAPGIIRKYR RNRTETRGIQ FEDFVRYLGD ENSBTAP00000005667/1-351 SAFKDKFVHN PRFEPWYRHE IAPGIIRKYR RNRTETRGIQ FEDFVRYLGD bmy_11050T0/1-299 SAFKDKFVHN PRFEPWYRHE IAPGIIRKYR RNRTETRGIQ FEDFVRYLGD ENSP00000264249/1-356 SAFKDKFVHN PRFEPWYRHE IAPGIIRKYR RNRTETRGIQ FEDFVRYLGD 251 300 BACU019136/1-360 PNHRWLDLQF GDHIIHWVTY VELCAPCEIK YSVIGHHETL EDDAPYILKE ENSTTRP00000005876/1-356 PNHRWLDLQF GDHIIHWVTY VELCAPCEIK YSVIGHHETL EDDAPYILKE ENSBTAP00000005667/1-351 PNHRWLDLQF GDHIIHWVTY VELCAPCEIT YSVVGHHETL ADDAPYILRE bmy_11050T0/1-299 PNHRWLDLQF GDHIIHWVTY VELCAPCEIK YSVIGHHETL EDDAPYILKE ENSP00000264249/1-356 PNHRWLDLQF GDHIIHWVTY VELCAPCEIM YSVIGHHETL EDDAPYILKE 301 350 BACU019136/1-360 AGIDHLVSYP TIPPGITAYN RTKVEHYFLG ISKRDIRRLF ARFEGDFKLF ENSTTRP00000005876/1-356 AGIDHLVSYP TIPPGITAYN RTKVEHYFLG ISKRDIRRLY ARFEGDFKLF ENSBTAP00000005667/1-351 AGIDHLVAYP TIPLGITAYN RTKVEQYFLG ISKRDIRRLY ARFEGDFKLF bmy_11050T0/1-299 AGIDHLVSYP TIPPGITAYN RTKVEHYFLG ISKRDIRRLY ARFEGDFKLF ENSP00000264249/1-356 AGIDHLVSYP TIPPGITVYN RTKVEHYFLG ISKRDIRRLY ARFEGDFKLF 351 400 BACU019136/1-360 GYQKPDFLLN ENSTTRP00000005876/1-356 GYQKPDFLLN ENSBTAP00000005667/1-351 GYQKPEFLLN bmy_11050T0/1-299 GYQKPDFLLN ENSP00000264249/1-356 GYQKPDFLLN